RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 COL11A2P13942 1736 aaPredicted RBP12.81□□□□□ -0.36
SPTLC3-204ENST00000450297 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
SPTLC3-204ENST00000450297 FOXN1O15353 648 aa12.8□□□□□ -0.36
SPTLC3-204ENST00000450297 VEGFBP49765 207 aa12.8□□□□□ -0.36
SPTLC3-204ENST00000450297 MAP1SQ66K74 1059 aaPredicted RBP12.8□□□□□ -0.36
SPTLC3-204ENST00000450297 PNMA8AQ86V59 439 aaPredicted RBP12.8□□□□□ -0.36
SPTLC3-204ENST00000450297 NUTM1Q86Y26 1132 aa12.8□□□□□ -0.36
SPTLC3-204ENST00000450297 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
SPTLC3-204ENST00000450297 RNF123Q5XPI4 1314 aa12.8□□□□□ -0.36
SPTLC3-204ENST00000450297 CNTNAP1P78357 1384 aa12.8□□□□□ -0.36
SPTLC3-204ENST00000450297 SLX4Q8IY92 1834 aa12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 KLRG2A4D1S0 409 aaPredicted RBP12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 RGL2O15211 777 aa12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 MYL6BP14649 208 aa12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 GPTP24298 496 aa12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 LMOD1P29536 600 aaPredicted RBP12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 EIF6P56537 245 aaKnown RBP12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 CNTROBQ8N137 903 aa12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 PASKQ96RG2 1323 aa12.79□□□□□ -0.36
SPTLC3-204ENST00000450297 VIRMAQ69YN4 1812 aaKnown RBP12.78□□□□□ -0.36
SPTLC3-204ENST00000450297 ITGBL1O95965 494 aaPredicted RBP12.78□□□□□ -0.36
SPTLC3-204ENST00000450297 CTCFP49711 727 aaPredicted RBP12.78□□□□□ -0.36
SPTLC3-204ENST00000450297 PAXIP1Q6ZW49 1069 aaPredicted RBP12.78□□□□□ -0.36
SPTLC3-204ENST00000450297 GPC2Q8N158 579 aa12.78□□□□□ -0.36
SPTLC3-204ENST00000450297 ZBTB3Q9H5J0 574 aa12.78□□□□□ -0.36
SPTLC3-204ENST00000450297 CCDC88AQ3V6T2 1871 aa12.78□□□□□ -0.36
SPTLC3-204ENST00000450297 FER1L6Q2WGJ9 1857 aa12.77□□□□□ -0.37
SPTLC3-204ENST00000450297 GRM1Q13255 1194 aa12.77□□□□□ -0.37
SPTLC3-204ENST00000450297 DEFB115Q30KQ5 88 aa12.77□□□□□ -0.37
SPTLC3-204ENST00000450297 CC2D2BQ6DHV5 1058 aa12.77□□□□□ -0.37
SPTLC3-204ENST00000450297 LARGE2Q8N3Y3 721 aa12.77□□□□□ -0.37
SPTLC3-204ENST00000450297 RBM17Q96I25 401 aaKnown RBP12.77□□□□□ -0.37
SPTLC3-204ENST00000450297 ERVV-1B6SEH8 477 aa12.76□□□□□ -0.37
SPTLC3-204ENST00000450297 FZD9O00144 591 aa12.76□□□□□ -0.37
SPTLC3-204ENST00000450297 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
SPTLC3-204ENST00000450297 PSMD1Q99460 953 aa12.76□□□□□ -0.37
SPTLC3-204ENST00000450297 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
SPTLC3-204ENST00000450297 PRDM10Q9NQV6 1147 aa12.76□□□□□ -0.37
SPTLC3-204ENST00000450297 MAP3K15Q6ZN16 1313 aa12.76□□□□□ -0.37
SPTLC3-204ENST00000450297 SIPA1L3O60292 1781 aaPredicted RBP12.76□□□□□ -0.37
SPTLC3-204ENST00000450297 LBX1P52954 281 aa12.75□□□□□ -0.37
SPTLC3-204ENST00000450297 SUSD4Q5VX71 490 aa12.75□□□□□ -0.37
SPTLC3-204ENST00000450297 NIM1KQ8IY84 436 aa12.75□□□□□ -0.37
SPTLC3-204ENST00000450297 ABCC12Q96J65 1359 aa12.75□□□□□ -0.37
SPTLC3-204ENST00000450297 MAPK8IP3Q9UPT6 1336 aa12.75□□□□□ -0.37
SPTLC3-204ENST00000450297 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
SPTLC3-204ENST00000450297 PPEF1O14829 653 aaPredicted RBP12.74□□□□□ -0.37
SPTLC3-204ENST00000450297 EIF4A1P60842 406 aaKnown RBP12.74□□□□□ -0.37
SPTLC3-204ENST00000450297 CRY2Q49AN0 593 aa12.74□□□□□ -0.37
SPTLC3-204ENST00000450297 BCORQ6W2J9 1755 aa12.74□□□□□ -0.37
SPTLC3-204ENST00000450297 PRKAR2AP13861 404 aaKnown RBP12.73□□□□□ -0.37
SPTLC3-204ENST00000450297 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
SPTLC3-204ENST00000450297 MAP2K1Q02750 393 aaPredicted RBP12.73□□□□□ -0.37
SPTLC3-204ENST00000450297 GRIPAP1Q4V328 841 aa12.73□□□□□ -0.37
SPTLC3-204ENST00000450297 PPP1R42Q7Z4L9 355 aa12.73□□□□□ -0.37
SPTLC3-204ENST00000450297 BEGAINQ9BUH8 593 aa12.73□□□□□ -0.37
SPTLC3-204ENST00000450297 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
SPTLC3-204ENST00000450297 DICER1Q9UPY3 1922 aaKnown RBP12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 CACNA1SQ13698 1873 aa12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 WDR33Q9C0J8 1336 aaKnown RBP12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 RASSF10A6NK89 507 aa12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 PPIP5K2O43314 1243 aa12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 HOXA10P31260 410 aaPredicted RBP12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 EPS15P42566 896 aa12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 NLRP3Q96P20 1036 aa12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 PNNQ9H307 717 aaKnown RBP12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 DDX21Q9NR30 783 aaKnown RBP eCLIP12.72□□□□□ -0.37
SPTLC3-204ENST00000450297 UBN2Q6ZU65 1347 aa12.71□□□□□ -0.37
SPTLC3-204ENST00000450297 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
SPTLC3-204ENST00000450297 PARP10Q53GL7 1025 aa12.71□□□□□ -0.37
SPTLC3-204ENST00000450297 UTP14AQ9BVJ6 771 aaKnown RBP12.71□□□□□ -0.37
SPTLC3-204ENST00000450297 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
SPTLC3-204ENST00000450297 TRAF5O00463 557 aa12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 NTSR2O95665 410 aa12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 ECE1P42892 770 aa12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 FMR1Q06787 632 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 AOC3Q16853 763 aa12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 GIGYF2Q6Y7W6 1299 aaKnown RBP12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 C3orf67Q6ZVT6 689 aa12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 USP50Q70EL3 339 aaPredicted RBP12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 SLC51AQ86UW1 340 aa12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 ZNF34Q8IZ26 560 aa12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 SUPT20HQ8NEM7 779 aa12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 CAPNS2Q96L46 248 aa12.7□□□□□ -0.38
SPTLC3-204ENST00000450297 SCN4AP35499 1836 aa12.69□□□□□ -0.38
SPTLC3-204ENST00000450297 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
SPTLC3-204ENST00000450297 HSPA8P11142 646 aaKnown RBP12.69□□□□□ -0.38
SPTLC3-204ENST00000450297 SCNN1DP51172 638 aa12.69□□□□□ -0.38
SPTLC3-204ENST00000450297 AIMP1Q12904 312 aaKnown RBP12.69□□□□□ -0.38
SPTLC3-204ENST00000450297 DPP8Q6V1X1 898 aaPredicted RBP12.69□□□□□ -0.38
SPTLC3-204ENST00000450297 NECTIN2Q92692 538 aa12.69□□□□□ -0.38
SPTLC3-204ENST00000450297 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
SPTLC3-204ENST00000450297 PCNTO95613 3336 aa12.68□□□□□ -0.38
SPTLC3-204ENST00000450297 ERBB4Q15303 1308 aa12.68□□□□□ -0.38
SPTLC3-204ENST00000450297 HAX1O00165 279 aa12.68□□□□□ -0.38
SPTLC3-204ENST00000450297 CYP4F22Q6NT55 531 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms