RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 LRP10Q7Z4F1 713 aa28.5■■■□□ 2.15
CPSF7-208ENST00000450000 DBF4Q9UBU7 674 aaPredicted RBP28.5■■■□□ 2.15
CPSF7-208ENST00000450000 TNRC6CQ9HCJ0 1690 aaKnown RBP28.49■■■□□ 2.15
CPSF7-208ENST00000450000 GNAI1P63096 354 aa28.49■■■□□ 2.15
CPSF7-208ENST00000450000 ZNF277Q9NRM2 450 aaPredicted RBP28.49■■■□□ 2.15
CPSF7-208ENST00000450000 DUSP27Q5VZP5 1158 aa28.48■■■□□ 2.15
CPSF7-208ENST00000450000 OLFM4Q6UX06 510 aa28.47■■■□□ 2.15
CPSF7-208ENST00000450000 SYNE4Q8N205 404 aa28.47■■■□□ 2.15
CPSF7-208ENST00000450000 MBIPQ9NS73 344 aa28.47■■■□□ 2.15
CPSF7-208ENST00000450000 IFT57Q9NWB7 429 aa28.47■■■□□ 2.15
CPSF7-208ENST00000450000 NUP98P52948 1817 aa28.47■■■□□ 2.15
CPSF7-208ENST00000450000 RNF123Q5XPI4 1314 aa28.46■■■□□ 2.15
CPSF7-208ENST00000450000 TCERG1O14776 1098 aaKnown RBP28.46■■■□□ 2.15
CPSF7-208ENST00000450000 DDNO94850 711 aaPredicted RBP28.46■■■□□ 2.15
CPSF7-208ENST00000450000 HOXA10P31260 410 aaPredicted RBP28.46■■■□□ 2.15
CPSF7-208ENST00000450000 TCIRG1Q13488 830 aa28.46■■■□□ 2.15
CPSF7-208ENST00000450000 GRIPAP1Q4V328 841 aa28.46■■■□□ 2.15
CPSF7-208ENST00000450000 CRAMP1Q96RY5 1269 aa28.46■■■□□ 2.15
CPSF7-208ENST00000450000 HYPKQ9NX55 129 aa28.46■■■□□ 2.15
CPSF7-208ENST00000450000 TRMT112Q9UI30 125 aaKnown RBP28.46■■■□□ 2.15
CPSF7-208ENST00000450000 TIAM2Q8IVF5 1701 aa28.46■■■□□ 2.15
CPSF7-208ENST00000450000 CACNA1SQ13698 1873 aa28.45■■■□□ 2.15
CPSF7-208ENST00000450000 FER1L6Q2WGJ9 1857 aa28.45■■■□□ 2.15
CPSF7-208ENST00000450000 JDP2Q8WYK2 163 aa28.45■■■□□ 2.14
CPSF7-208ENST00000450000 RIC1Q4ADV7 1423 aa28.44■■■□□ 2.14
CPSF7-208ENST00000450000 PPEF1O14829 653 aaPredicted RBP28.44■■■□□ 2.14
CPSF7-208ENST00000450000 ANP32CO43423 234 aa28.44■■■□□ 2.14
CPSF7-208ENST00000450000 IARSP41252 1262 aaKnown RBP28.44■■■□□ 2.14
CPSF7-208ENST00000450000 ANKRD13DQ6ZTN6 518 aa28.44■■■□□ 2.14
CPSF7-208ENST00000450000 NLRP10Q86W26 655 aa28.44■■■□□ 2.14
CPSF7-208ENST00000450000 CHMP4AQ9BY43 222 aa28.44■■■□□ 2.14
CPSF7-208ENST00000450000 CCDC88AQ3V6T2 1871 aa28.43■■■□□ 2.14
CPSF7-208ENST00000450000 IQCA1LA6NCM1 817 aa28.43■■■□□ 2.14
CPSF7-208ENST00000450000 PLBD2Q8NHP8 589 aa28.43■■■□□ 2.14
CPSF7-208ENST00000450000 ARFGEF2Q9Y6D5 1785 aa28.42■■■□□ 2.14
CPSF7-208ENST00000450000 ZNF316A6NFI3 1004 aaPredicted RBP28.42■■■□□ 2.14
CPSF7-208ENST00000450000 SLC10A5Q5PT55 438 aa28.42■■■□□ 2.14
CPSF7-208ENST00000450000 SH3TC1Q8TE82 1336 aa28.42■■■□□ 2.14
CPSF7-208ENST00000450000 ELL2O00472 640 aaPredicted RBP28.41■■■□□ 2.14
CPSF7-208ENST00000450000 PSMD1Q99460 953 aa28.41■■■□□ 2.14
CPSF7-208ENST00000450000 ZNF853P0CG23 659 aa28.39■■■□□ 2.14
CPSF7-208ENST00000450000 HCLS1P14317 486 aaPredicted RBP28.39■■■□□ 2.14
CPSF7-208ENST00000450000 GOLGA2Q08379 1002 aa28.39■■■□□ 2.14
CPSF7-208ENST00000450000 DDX46Q7L014 1031 aaKnown RBP28.39■■■□□ 2.14
CPSF7-208ENST00000450000 POTECB2RU33 542 aa28.38■■■□□ 2.13
CPSF7-208ENST00000450000 EIF6P56537 245 aaKnown RBP28.38■■■□□ 2.13
CPSF7-208ENST00000450000 C3orf67Q6ZVT6 689 aa28.38■■■□□ 2.13
CPSF7-208ENST00000450000 RIC3Q7Z5B4 369 aa28.38■■■□□ 2.13
CPSF7-208ENST00000450000 MRS2Q9HD23 443 aa28.38■■■□□ 2.13
CPSF7-208ENST00000450000 LARGE2Q8N3Y3 721 aa28.37■■■□□ 2.13
CPSF7-208ENST00000450000 ATP5J2-PTCD1G3V325 749 aa28.35■■■□□ 2.13
CPSF7-208ENST00000450000 BBOX1O75936 387 aa28.35■■■□□ 2.13
CPSF7-208ENST00000450000 HTRA3P83110 453 aa28.35■■■□□ 2.13
CPSF7-208ENST00000450000 ZNF428Q96B54 188 aa28.35■■■□□ 2.13
CPSF7-208ENST00000450000 DICER1Q9UPY3 1922 aaKnown RBP28.35■■■□□ 2.13
CPSF7-208ENST00000450000 WDR90Q96KV7 1748 aa28.35■■■□□ 2.13
CPSF7-208ENST00000450000 CHADLQ6NUI6 762 aa28.34■■■□□ 2.13
CPSF7-208ENST00000450000 SUPT20HQ8NEM7 779 aa28.34■■■□□ 2.13
CPSF7-208ENST00000450000 HACL1Q9UJ83 578 aa28.34■■■□□ 2.13
CPSF7-208ENST00000450000 ATP6V0A2Q9Y487 856 aa28.34■■■□□ 2.13
CPSF7-208ENST00000450000 ZNF541Q9H0D2 1346 aa28.34■■■□□ 2.13
CPSF7-208ENST00000450000 CCDC184Q52MB2 194 aa28.33■■■□□ 2.13
CPSF7-208ENST00000450000 EAPPQ56P03 285 aaPredicted RBP28.33■■■□□ 2.13
CPSF7-208ENST00000450000 CCDC30Q5VVM6 783 aa28.33■■■□□ 2.13
CPSF7-208ENST00000450000 L3MBTL3Q96JM7 780 aaPredicted RBP28.33■■■□□ 2.13
CPSF7-208ENST00000450000 ABCC4O15439 1325 aa28.33■■■□□ 2.13
CPSF7-208ENST00000450000 FZD9O00144 591 aa28.32■■■□□ 2.12
CPSF7-208ENST00000450000 NIM1KQ8IY84 436 aa28.32■■■□□ 2.12
CPSF7-208ENST00000450000 DNAJC5GQ8N7S2 189 aa28.32■■■□□ 2.12
CPSF7-208ENST00000450000 CLEC11AQ9Y240 323 aa28.32■■■□□ 2.12
CPSF7-208ENST00000450000 GJA3Q9Y6H8 435 aa28.32■■■□□ 2.12
CPSF7-208ENST00000450000 PPIP5K2O43314 1243 aa28.31■■■□□ 2.12
CPSF7-208ENST00000450000 DDX58O95786 925 aaKnown RBP28.31■■■□□ 2.12
CPSF7-208ENST00000450000 GPC2Q8N158 579 aa28.31■■■□□ 2.12
CPSF7-208ENST00000450000 ISCA1Q9BUE6 129 aa28.31■■■□□ 2.12
CPSF7-208ENST00000450000 HSP90B1P14625 803 aaKnown RBP28.3■■■□□ 2.12
CPSF7-208ENST00000450000 GRAPQ13588 217 aa28.3■■■□□ 2.12
CPSF7-208ENST00000450000 DPP8Q6V1X1 898 aaPredicted RBP28.3■■■□□ 2.12
CPSF7-208ENST00000450000 C8orf58Q8NAV2 365 aa28.3■■■□□ 2.12
CPSF7-208ENST00000450000 GRAPLQ8TC17 118 aaPredicted RBP28.3■■■□□ 2.12
CPSF7-208ENST00000450000 KLRG1Q96E93 195 aa28.3■■■□□ 2.12
CPSF7-208ENST00000450000 FAM89AQ96GI7 184 aa28.3■■■□□ 2.12
CPSF7-208ENST00000450000 TAF1DQ9H5J8 278 aaPredicted RBP28.3■■■□□ 2.12
CPSF7-208ENST00000450000 LMOD1P29536 600 aaPredicted RBP28.29■■■□□ 2.12
CPSF7-208ENST00000450000 RTL5Q5HYW3 569 aaPredicted RBP28.29■■■□□ 2.12
CPSF7-208ENST00000450000 LDHDQ86WU2 507 aa28.29■■■□□ 2.12
CPSF7-208ENST00000450000 SP8Q8IXZ3 490 aa28.29■■■□□ 2.12
CPSF7-208ENST00000450000 MPNDQ8N594 471 aa28.29■■■□□ 2.12
CPSF7-208ENST00000450000 PHAXQ9H814 394 aaKnown RBP28.29■■■□□ 2.12
CPSF7-208ENST00000450000 CCDC27Q2M243 656 aa28.28■■■□□ 2.12
CPSF7-208ENST00000450000 TMC4Q7Z404 712 aa28.28■■■□□ 2.12
CPSF7-208ENST00000450000 STK31Q9BXU1 1019 aa28.28■■■□□ 2.12
CPSF7-208ENST00000450000 EPHX2P34913 555 aa28.27■■■□□ 2.12
CPSF7-208ENST00000450000 PNMA8AQ86V59 439 aaPredicted RBP28.27■■■□□ 2.12
CPSF7-208ENST00000450000 VPS33BQ9H267 617 aa28.27■■■□□ 2.12
CPSF7-208ENST00000450000 CEP350Q5VT06 3117 aa28.26■■■□□ 2.11
CPSF7-208ENST00000450000 TSR2Q969E8 191 aaKnown RBP28.26■■■□□ 2.11
CPSF7-208ENST00000450000 MYD88Q99836 296 aa28.26■■■□□ 2.11
CPSF7-208ENST00000450000 IRS4O14654 1257 aaPredicted RBP28.25■■■□□ 2.11
CPSF7-208ENST00000450000 POTEIP0CG38 1075 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms