RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 ERVV-2B6SEH9 535 aa11.12□□□□□ -0.63
LINC01961-201ENST00000449954 C21orf2O43822 256 aa11.12□□□□□ -0.63
LINC01961-201ENST00000449954 MAP1SQ66K74 1059 aaPredicted RBP11.12□□□□□ -0.63
LINC01961-201ENST00000449954 SERPINB2P05120 415 aa11.11□□□□□ -0.63
LINC01961-201ENST00000449954 NFIXQ14938 502 aa11.11□□□□□ -0.63
LINC01961-201ENST00000449954 USPL1Q5W0Q7 1092 aa11.11□□□□□ -0.63
LINC01961-201ENST00000449954 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
LINC01961-201ENST00000449954 TLL2Q9Y6L7 1015 aa11.11□□□□□ -0.63
LINC01961-201ENST00000449954 CARMIL3Q8ND23 1372 aa11.11□□□□□ -0.63
LINC01961-201ENST00000449954 TJP1Q07157 1748 aa11.1□□□□□ -0.63
LINC01961-201ENST00000449954 HSP90AB1P08238 724 aaKnown RBP11.1□□□□□ -0.63
LINC01961-201ENST00000449954 ARSIQ5FYB1 569 aa11.1□□□□□ -0.63
LINC01961-201ENST00000449954 HABP4Q5JVS0 413 aaKnown RBP11.1□□□□□ -0.63
LINC01961-201ENST00000449954 TRPM7Q96QT4 1865 aa11.1□□□□□ -0.63
LINC01961-201ENST00000449954 COL11A2P13942 1736 aaPredicted RBP11.09□□□□□ -0.63
LINC01961-201ENST00000449954 ANKRD26Q9UPS8 1709 aa11.09□□□□□ -0.63
LINC01961-201ENST00000449954 ARFGEF2Q9Y6D5 1785 aa11.09□□□□□ -0.63
LINC01961-201ENST00000449954 AOC2O75106 756 aa11.09□□□□□ -0.63
LINC01961-201ENST00000449954 PDE6BP35913 854 aa11.09□□□□□ -0.63
LINC01961-201ENST00000449954 GPR153Q6NV75 609 aa11.09□□□□□ -0.63
LINC01961-201ENST00000449954 ZNF622Q969S3 477 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC01961-201ENST00000449954 HHIPL1Q96JK4 782 aa11.09□□□□□ -0.63
LINC01961-201ENST00000449954 HS3ST6Q96QI5 342 aa11.09□□□□□ -0.63
LINC01961-201ENST00000449954 ANKRD31Q8N7Z5 1873 aa11.08□□□□□ -0.64
LINC01961-201ENST00000449954 SOS1Q07889 1333 aaPredicted RBP11.08□□□□□ -0.64
LINC01961-201ENST00000449954 RNF123Q5XPI4 1314 aa11.08□□□□□ -0.64
LINC01961-201ENST00000449954 ZNF541Q9H0D2 1346 aa11.08□□□□□ -0.64
LINC01961-201ENST00000449954 PTCD1O75127 700 aaKnown RBP11.07□□□□□ -0.64
LINC01961-201ENST00000449954 CNKSR1Q969H4 720 aa11.07□□□□□ -0.64
LINC01961-201ENST00000449954 BRIP1Q9BX63 1249 aa11.07□□□□□ -0.64
LINC01961-201ENST00000449954 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
LINC01961-201ENST00000449954 NARFQ9UHQ1 456 aa11.07□□□□□ -0.64
LINC01961-201ENST00000449954 COL15A1P39059 1388 aa11.06□□□□□ -0.64
LINC01961-201ENST00000449954 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
LINC01961-201ENST00000449954 CABP4P57796 275 aa11.06□□□□□ -0.64
LINC01961-201ENST00000449954 INTS5Q6P9B9 1019 aaKnown RBP11.06□□□□□ -0.64
LINC01961-201ENST00000449954 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
LINC01961-201ENST00000449954 GPC2Q8N158 579 aa11.06□□□□□ -0.64
LINC01961-201ENST00000449954 CST9Q5W186 159 aa11.05□□□□□ -0.64
LINC01961-201ENST00000449954 PRPF40BQ6NWY9 871 aaKnown RBP11.05□□□□□ -0.64
LINC01961-201ENST00000449954 SAPCD2Q86UD0 394 aa11.05□□□□□ -0.64
LINC01961-201ENST00000449954 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
LINC01961-201ENST00000449954 KHSRPQ92945 711 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01961-201ENST00000449954 FYB1O15117 783 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 NOGQ13253 232 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 CCDC93Q567U6 631 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 CIAPIN1Q6FI81 312 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 STYK1Q6J9G0 422 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 L3MBTL2Q969R5 705 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 GGNBP2Q9H3C7 697 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 SAGE1Q9NXZ1 904 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 SLX4Q8IY92 1834 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 KIF20BQ96Q89 1820 aa11.04□□□□□ -0.64
LINC01961-201ENST00000449954 MKI67P46013 3256 aaKnown RBP11.04□□□□□ -0.64
LINC01961-201ENST00000449954 BCORQ6W2J9 1755 aa11.03□□□□□ -0.64
LINC01961-201ENST00000449954 LMOD1P29536 600 aaPredicted RBP11.03□□□□□ -0.64
LINC01961-201ENST00000449954 FOXK1P85037 733 aa11.03□□□□□ -0.64
LINC01961-201ENST00000449954 FKBP4Q02790 459 aaKnown RBP eCLIP11.03□□□□□ -0.64
LINC01961-201ENST00000449954 BCL2L12Q9HB09 334 aa11.03□□□□□ -0.64
LINC01961-201ENST00000449954 CACNA1SQ13698 1873 aa11.03□□□□□ -0.64
LINC01961-201ENST00000449954 FZD9O00144 591 aa11.02□□□□□ -0.65
LINC01961-201ENST00000449954 FXR1P51114 621 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC01961-201ENST00000449954 DSG2Q14126 1118 aa11.02□□□□□ -0.65
LINC01961-201ENST00000449954 VARS2Q5ST30 1063 aaKnown RBP11.02□□□□□ -0.65
LINC01961-201ENST00000449954 EYA1Q99502 592 aa11.02□□□□□ -0.65
LINC01961-201ENST00000449954 TRAF5O00463 557 aa11.01□□□□□ -0.65
LINC01961-201ENST00000449954 DLL1O00548 723 aa11.01□□□□□ -0.65
LINC01961-201ENST00000449954 SRGNP10124 158 aa11.01□□□□□ -0.65
LINC01961-201ENST00000449954 FMR1Q06787 632 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC01961-201ENST00000449954 BICDL1Q6ZP65 573 aa11.01□□□□□ -0.65
LINC01961-201ENST00000449954 USP50Q70EL3 339 aaPredicted RBP11.01□□□□□ -0.65
LINC01961-201ENST00000449954 CTU1Q7Z7A3 348 aaKnown RBP11.01□□□□□ -0.65
LINC01961-201ENST00000449954 MASTLQ96GX5 879 aa11.01□□□□□ -0.65
LINC01961-201ENST00000449954 PCDHGA4Q9Y5G9 962 aa11.01□□□□□ -0.65
LINC01961-201ENST00000449954 EMILIN1Q9Y6C2 1016 aa11.01□□□□□ -0.65
LINC01961-201ENST00000449954 SCN7AQ01118 1682 aa11.01□□□□□ -0.65
LINC01961-201ENST00000449954 A0A0C4DFX4 3053 aa11□□□□□ -0.65
LINC01961-201ENST00000449954 PDE4AP27815 886 aa11□□□□□ -0.65
LINC01961-201ENST00000449954 AKAP4Q5JQC9 854 aa11□□□□□ -0.65
LINC01961-201ENST00000449954 PRR5LQ6MZQ0 368 aa11□□□□□ -0.65
LINC01961-201ENST00000449954 ZNF277Q9NRM2 450 aaPredicted RBP11□□□□□ -0.65
LINC01961-201ENST00000449954 WASHC2AQ641Q2 1341 aa11□□□□□ -0.65
LINC01961-201ENST00000449954 CUL9Q8IWT3 2517 aa10.99□□□□□ -0.65
LINC01961-201ENST00000449954 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
LINC01961-201ENST00000449954 CELF2O95319 508 aaKnown RBP10.99□□□□□ -0.65
LINC01961-201ENST00000449954 NUDT7P0C024 238 aa10.99□□□□□ -0.65
LINC01961-201ENST00000449954 CYP19A1P11511 503 aaPredicted RBP10.99□□□□□ -0.65
LINC01961-201ENST00000449954 PKN2Q16513 984 aaKnown RBP10.99□□□□□ -0.65
LINC01961-201ENST00000449954 DNAJC10Q8IXB1 793 aa10.99□□□□□ -0.65
LINC01961-201ENST00000449954 RTKN2Q8IZC4 609 aa10.99□□□□□ -0.65
LINC01961-201ENST00000449954 C7orf43Q8WVR3 580 aa10.99□□□□□ -0.65
LINC01961-201ENST00000449954 CARD11Q9BXL7 1154 aa10.99□□□□□ -0.65
LINC01961-201ENST00000449954 HPS5Q9UPZ3 1129 aa10.99□□□□□ -0.65
LINC01961-201ENST00000449954 SZT2Q5T011 3432 aa10.99□□□□□ -0.65
LINC01961-201ENST00000449954 NPHP1O15259 732 aa10.98□□□□□ -0.65
LINC01961-201ENST00000449954 IARSP41252 1262 aaKnown RBP10.98□□□□□ -0.65
LINC01961-201ENST00000449954 ST5P78524 1137 aa10.98□□□□□ -0.65
LINC01961-201ENST00000449954 CNBD1Q8NA66 436 aa10.98□□□□□ -0.65
LINC01961-201ENST00000449954 JDP2Q8WYK2 163 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms