RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 HDAC9Q9UKV0 1011 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 NSD2O96028 1365 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 CCDC40Q4G0X9 1142 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 STXBP4Q6ZWJ1 553 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 RAB11FIP4Q86YS3 637 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 NCOA7Q8NI08 942 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 FANCAO15360 1455 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 TCERG1LQ5VWI1 586 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 MICU3Q86XE3 530 aa16.14■□□□□ 0.17
RAPGEF3-205ENST00000449771 TNRQ92752 1358 aa16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 FSIP1Q8NA03 581 aa16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 F8W031 263 aaPredicted RBP16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 CTNNA2P26232 953 aa16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 CPLX3Q8WVH0 158 aa16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 SLC26A6Q9BXS9 759 aa16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 SCAF11Q99590 1463 aaKnown RBP16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 GSTTP1A0A1W2PQM5 241 aa16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 IDEP14735 1019 aa16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 GRM1Q13255 1194 aa16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 C20orf194Q5TEA3 1177 aa16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 DYDC1Q8WWB3 177 aa16.13■□□□□ 0.17
RAPGEF3-205ENST00000449771 YEATS4O95619 227 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 TSPY8P0CW00 308 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 GJB2P29033 226 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 LUZP1Q86V48 1076 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 C8orf37Q96NL8 207 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 TOM1O60784 492 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 TRIM27P14373 513 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 BICD1Q96G01 975 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 TTC21AQ8NDW8 1320 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 CUL7Q14999 1698 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 CTAGE5O15320 804 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 USO1O60763 962 aaKnown RBP16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 UBXN4Q92575 508 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 CA8P35219 290 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
RAPGEF3-205ENST00000449771 PUF60Q9UHX1 559 aaKnown RBP16.11■□□□□ 0.17
RAPGEF3-205ENST00000449771 ANXA1P04083 346 aa16.11■□□□□ 0.17
RAPGEF3-205ENST00000449771 NEK1Q96PY6 1258 aa16.11■□□□□ 0.17
RAPGEF3-205ENST00000449771 TRERF1Q96PN7 1200 aa16.11■□□□□ 0.17
RAPGEF3-205ENST00000449771 CRACR2AQ9BSW2 395 aa16.11■□□□□ 0.17
RAPGEF3-205ENST00000449771 C14orf93Q9H972 538 aaKnown RBP16.11■□□□□ 0.17
RAPGEF3-205ENST00000449771 PRC1O43663 620 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 CKAP2LQ8IYA6 745 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 KIF4BQ2VIQ3 1234 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 CLIP2Q9UDT6 1046 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 CYP7A1P22680 504 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 PICALMQ13492 652 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 HOOK3Q86VS8 718 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 ZGPATQ8N5A5 531 aaKnown RBP16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 PTPN14Q15678 1187 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 GBP3Q9H0R5 595 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 STX8Q9UNK0 236 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 PANK2Q9BZ23 570 aa16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 ORC3Q9UBD5 711 aaPredicted RBP16.1■□□□□ 0.17
RAPGEF3-205ENST00000449771 MAP2K1Q02750 393 aaPredicted RBP16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 TSHZ3Q63HK5 1081 aa16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 CHPF2Q9P2E5 772 aa16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 DHX29Q7Z478 1369 aaKnown RBP16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 PPFIA3O75145 1194 aa16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 TBCAO75347 108 aaKnown RBP16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 UBA7P41226 1012 aa16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 FAM114A1Q8IWE2 563 aa16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 VTI1AQ96AJ9 217 aa16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 TMX1Q9H3N1 280 aa16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 SLC4A4Q9Y6R1 1079 aa16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 IFFO1Q0D2I5 559 aa16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
RAPGEF3-205ENST00000449771 BIN1O00499 593 aa16.08■□□□□ 0.17
RAPGEF3-205ENST00000449771 PYM1Q9BRP8 204 aaKnown RBP16.08■□□□□ 0.17
RAPGEF3-205ENST00000449771 MMRN2Q9H8L6 949 aa16.08■□□□□ 0.17
RAPGEF3-205ENST00000449771 WTAPQ15007 396 aa16.08■□□□□ 0.17
RAPGEF3-205ENST00000449771 LRRC27Q9C0I9 530 aa16.08■□□□□ 0.17
RAPGEF3-205ENST00000449771 COMMD10Q9Y6G5 202 aa16.08■□□□□ 0.17
RAPGEF3-205ENST00000449771 OGFOD1Q8N543 542 aa16.08■□□□□ 0.16
RAPGEF3-205ENST00000449771 IQSEC3Q9UPP2 1182 aaPredicted RBP16.08■□□□□ 0.16
RAPGEF3-205ENST00000449771 ANKRD36BQ8N2N9 1353 aa16.08■□□□□ 0.16
RAPGEF3-205ENST00000449771 KIF2AO00139 706 aaPredicted RBP16.08■□□□□ 0.16
RAPGEF3-205ENST00000449771 NLRP3Q96P20 1036 aa16.08■□□□□ 0.16
RAPGEF3-205ENST00000449771 HMG20BQ9P0W2 317 aa16.08■□□□□ 0.16
RAPGEF3-205ENST00000449771 XAGE3Q8WTP9 111 aa16.08■□□□□ 0.16
RAPGEF3-205ENST00000449771 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
RAPGEF3-205ENST00000449771 KRT23Q9C075 422 aa16.08■□□□□ 0.16
RAPGEF3-205ENST00000449771 ZNF804AQ7Z570 1209 aa16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 IFIT1BQ5T764 474 aaKnown RBP16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 NPHP3Q7Z494 1330 aa16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 TFIP11Q9UBB9 837 aaKnown RBP16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 TMCO5BA8MYB1 307 aa16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 MCM5P33992 734 aa16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 DDB1Q16531 1140 aa16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 CCDC174Q6PII3 467 aa16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 SSFA2P28290 1259 aa16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 PAFAH1B1P43034 410 aa16.07■□□□□ 0.16
RAPGEF3-205ENST00000449771 ERMNQ8TAM6 284 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms