RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 PPP1R42Q7Z4L9 355 aa17■□□□□ 0.31
SEC22C-209ENST00000449617 MRS2Q9HD23 443 aa17■□□□□ 0.31
SEC22C-209ENST00000449617 ALDH1B1P30837 517 aa16.99■□□□□ 0.31
SEC22C-209ENST00000449617 RPGRQ92834 1020 aaKnown RBP16.99■□□□□ 0.31
SEC22C-209ENST00000449617 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
SEC22C-209ENST00000449617 RRAGCQ9HB90 399 aa16.99■□□□□ 0.31
SEC22C-209ENST00000449617 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
SEC22C-209ENST00000449617 GLTPD2A6NH11 291 aa16.98■□□□□ 0.31
SEC22C-209ENST00000449617 HSPA6P17066 643 aa16.98■□□□□ 0.31
SEC22C-209ENST00000449617 HSP90AB3PQ58FF7 597 aa16.98■□□□□ 0.31
SEC22C-209ENST00000449617 C3orf67Q6ZVT6 689 aa16.98■□□□□ 0.31
SEC22C-209ENST00000449617 HOXA10P31260 410 aaPredicted RBP16.97■□□□□ 0.31
SEC22C-209ENST00000449617 TCIRG1Q13488 830 aa16.97■□□□□ 0.31
SEC22C-209ENST00000449617 NLRP10Q86W26 655 aa16.97■□□□□ 0.31
SEC22C-209ENST00000449617 C16orf71Q8IYS4 520 aaPredicted RBP16.97■□□□□ 0.31
SEC22C-209ENST00000449617 LAMB2P55268 1798 aa16.97■□□□□ 0.31
SEC22C-209ENST00000449617 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
SEC22C-209ENST00000449617 HYPKQ9NX55 129 aa16.96■□□□□ 0.31
SEC22C-209ENST00000449617 FKBP4Q02790 459 aaKnown RBP eCLIP16.96■□□□□ 0.3
SEC22C-209ENST00000449617 RTKN2Q8IZC4 609 aa16.96■□□□□ 0.3
SEC22C-209ENST00000449617 C8orf58Q8NAV2 365 aa16.96■□□□□ 0.3
SEC22C-209ENST00000449617 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.3
SEC22C-209ENST00000449617 RBM46Q8TBY0 533 aaKnown RBP16.96■□□□□ 0.3
SEC22C-209ENST00000449617 RNF123Q5XPI4 1314 aa16.95■□□□□ 0.3
SEC22C-209ENST00000449617 SNED1Q8TER0 1413 aa16.95■□□□□ 0.3
SEC22C-209ENST00000449617 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
SEC22C-209ENST00000449617 SLC10A5Q5PT55 438 aa16.95■□□□□ 0.3
SEC22C-209ENST00000449617 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
SEC22C-209ENST00000449617 RBM17Q96I25 401 aaKnown RBP16.95■□□□□ 0.3
SEC22C-209ENST00000449617 NLRP3Q96P20 1036 aa16.95■□□□□ 0.3
SEC22C-209ENST00000449617 ZNF277Q9NRM2 450 aaPredicted RBP16.95■□□□□ 0.3
SEC22C-209ENST00000449617 WDR90Q96KV7 1748 aa16.94■□□□□ 0.3
SEC22C-209ENST00000449617 DPY19L2Q6NUT2 758 aa16.94■□□□□ 0.3
SEC22C-209ENST00000449617 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
SEC22C-209ENST00000449617 SYNE4Q8N205 404 aa16.94■□□□□ 0.3
SEC22C-209ENST00000449617 TSR2Q969E8 191 aaKnown RBP16.94■□□□□ 0.3
SEC22C-209ENST00000449617 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
SEC22C-209ENST00000449617 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
SEC22C-209ENST00000449617 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
SEC22C-209ENST00000449617 HCLS1P14317 486 aaPredicted RBP16.93■□□□□ 0.3
SEC22C-209ENST00000449617 VEGFAP15692 232 aaPredicted RBP16.93■□□□□ 0.3
SEC22C-209ENST00000449617 SLC51AQ86UW1 340 aa16.93■□□□□ 0.3
SEC22C-209ENST00000449617 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
SEC22C-209ENST00000449617 PPEF1O14829 653 aaPredicted RBP16.92■□□□□ 0.3
SEC22C-209ENST00000449617 DDX60Q8IY21 1712 aaKnown RBP16.92■□□□□ 0.3
SEC22C-209ENST00000449617 ATP5J2-PTCD1G3V325 749 aa16.91■□□□□ 0.3
SEC22C-209ENST00000449617 TCERG1O14776 1098 aaKnown RBP16.91■□□□□ 0.3
SEC22C-209ENST00000449617 CC2D2BQ6DHV5 1058 aa16.91■□□□□ 0.3
SEC22C-209ENST00000449617 TSPYL6Q8N831 410 aa16.91■□□□□ 0.3
SEC22C-209ENST00000449617 ISCA1Q9BUE6 129 aa16.91■□□□□ 0.3
SEC22C-209ENST00000449617 PHAXQ9H814 394 aaKnown RBP16.91■□□□□ 0.3
SEC22C-209ENST00000449617 ABCC4O15439 1325 aa16.91■□□□□ 0.3
SEC22C-209ENST00000449617 POTECB2RU33 542 aa16.9■□□□□ 0.3
SEC22C-209ENST00000449617 DDNO94850 711 aaPredicted RBP16.9■□□□□ 0.3
SEC22C-209ENST00000449617 IARSP41252 1262 aaKnown RBP16.9■□□□□ 0.3
SEC22C-209ENST00000449617 GOLGA2Q08379 1002 aa16.9■□□□□ 0.3
SEC22C-209ENST00000449617 FSTL1Q12841 308 aa16.9■□□□□ 0.3
SEC22C-209ENST00000449617 PSMD1Q99460 953 aa16.9■□□□□ 0.3
SEC22C-209ENST00000449617 APLP1P51693 650 aa16.89■□□□□ 0.29
SEC22C-209ENST00000449617 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
SEC22C-209ENST00000449617 RIC3Q7Z5B4 369 aa16.89■□□□□ 0.29
SEC22C-209ENST00000449617 IL16Q14005 1332 aa16.89■□□□□ 0.29
SEC22C-209ENST00000449617 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
SEC22C-209ENST00000449617 TAF1P21675 1872 aa16.89■□□□□ 0.29
SEC22C-209ENST00000449617 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
SEC22C-209ENST00000449617 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
SEC22C-209ENST00000449617 FAM89AQ96GI7 184 aa16.88■□□□□ 0.29
SEC22C-209ENST00000449617 SALL2Q9Y467 1007 aaPredicted RBP16.88■□□□□ 0.29
SEC22C-209ENST00000449617 COL4A5P29400 1685 aa16.88■□□□□ 0.29
SEC22C-209ENST00000449617 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
SEC22C-209ENST00000449617 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
SEC22C-209ENST00000449617 TRIM28Q13263 835 aaKnown RBP16.87■□□□□ 0.29
SEC22C-209ENST00000449617 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
SEC22C-209ENST00000449617 DDX46Q7L014 1031 aaKnown RBP16.87■□□□□ 0.29
SEC22C-209ENST00000449617 ATP6V0A2Q9Y487 856 aa16.87■□□□□ 0.29
SEC22C-209ENST00000449617 FAM9BQ8IZU0 186 aa16.86■□□□□ 0.29
SEC22C-209ENST00000449617 L3MBTL3Q96JM7 780 aaPredicted RBP16.86■□□□□ 0.29
SEC22C-209ENST00000449617 MYD88Q99836 296 aa16.86■□□□□ 0.29
SEC22C-209ENST00000449617 TMX4Q9H1E5 349 aaPredicted RBP16.86■□□□□ 0.29
SEC22C-209ENST00000449617 SCN4AP35499 1836 aa16.85■□□□□ 0.29
SEC22C-209ENST00000449617 FANCIQ9NVI1 1328 aa16.85■□□□□ 0.29
SEC22C-209ENST00000449617 FZD9O00144 591 aa16.85■□□□□ 0.29
SEC22C-209ENST00000449617 BBOX1O75936 387 aa16.85■□□□□ 0.29
SEC22C-209ENST00000449617 GRAPQ13588 217 aa16.85■□□□□ 0.29
SEC22C-209ENST00000449617 TWISTNBQ3B726 338 aaPredicted RBP16.85■□□□□ 0.29
SEC22C-209ENST00000449617 GRAPLQ8TC17 118 aaPredicted RBP16.85■□□□□ 0.29
SEC22C-209ENST00000449617 JDP2Q8WYK2 163 aa16.85■□□□□ 0.29
SEC22C-209ENST00000449617 DDX58O95786 925 aaKnown RBP16.84■□□□□ 0.29
SEC22C-209ENST00000449617 LARGE2Q8N3Y3 721 aa16.84■□□□□ 0.29
SEC22C-209ENST00000449617 STK31Q9BXU1 1019 aa16.84■□□□□ 0.29
SEC22C-209ENST00000449617 LRRC37AA6NMS7 1700 aa16.83■□□□□ 0.28
SEC22C-209ENST00000449617 IQCA1LA6NCM1 817 aa16.83■□□□□ 0.28
SEC22C-209ENST00000449617 IRS4O14654 1257 aaPredicted RBP16.83■□□□□ 0.28
SEC22C-209ENST00000449617 SF3B3Q15393 1217 aaKnown RBP16.83■□□□□ 0.28
SEC22C-209ENST00000449617 WDR63Q8IWG1 891 aa16.83■□□□□ 0.28
SEC22C-209ENST00000449617 SP8Q8IXZ3 490 aa16.83■□□□□ 0.28
SEC22C-209ENST00000449617 METTL22Q9BUU2 404 aaPredicted RBP16.83■□□□□ 0.28
SEC22C-209ENST00000449617 MAP3K2Q9Y2U5 619 aa16.83■□□□□ 0.28
SEC22C-209ENST00000449617 COL4A1P02462 1669 aa16.83■□□□□ 0.28
SEC22C-209ENST00000449617 PPIP5K2O43314 1243 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms