RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 DDX58O95786 925 aaKnown RBP12.5□□□□□ -0.41
CCDC171-203ENST00000449575 SLC4A10Q6U841 1118 aa12.5□□□□□ -0.41
CCDC171-203ENST00000449575 NLRP10Q86W26 655 aa12.5□□□□□ -0.41
CCDC171-203ENST00000449575 ISCA1Q9BUE6 129 aa12.5□□□□□ -0.41
CCDC171-203ENST00000449575 PODXL2Q9NZ53 605 aa12.5□□□□□ -0.41
CCDC171-203ENST00000449575 TNRC6CQ9HCJ0 1690 aaKnown RBP12.5□□□□□ -0.41
CCDC171-203ENST00000449575 TAF1P21675 1872 aa12.5□□□□□ -0.41
CCDC171-203ENST00000449575 PLIN1O60240 522 aa12.5□□□□□ -0.41
CCDC171-203ENST00000449575 POLD1P28340 1107 aa12.5□□□□□ -0.41
CCDC171-203ENST00000449575 BRPF1P55201 1214 aaPredicted RBP12.5□□□□□ -0.41
CCDC171-203ENST00000449575 PARP3Q9Y6F1 533 aa12.5□□□□□ -0.41
CCDC171-203ENST00000449575 LAMB2P55268 1798 aa12.5□□□□□ -0.41
CCDC171-203ENST00000449575 KIAA1551Q9HCM1 1747 aa12.5□□□□□ -0.41
CCDC171-203ENST00000449575 DDX60Q8IY21 1712 aaKnown RBP12.49□□□□□ -0.41
CCDC171-203ENST00000449575 PRR5LQ6MZQ0 368 aa12.49□□□□□ -0.41
CCDC171-203ENST00000449575 HOMEZQ8IX15 550 aa12.49□□□□□ -0.41
CCDC171-203ENST00000449575 CLUAP1Q96AJ1 413 aa12.49□□□□□ -0.41
CCDC171-203ENST00000449575 PPP1R1BQ9UD71 204 aaPredicted RBP12.49□□□□□ -0.41
CCDC171-203ENST00000449575 CACNA1SQ13698 1873 aa12.48□□□□□ -0.41
CCDC171-203ENST00000449575 NTSR2O95665 410 aa12.48□□□□□ -0.41
CCDC171-203ENST00000449575 TRIM27P14373 513 aa12.48□□□□□ -0.41
CCDC171-203ENST00000449575 COL11A2P13942 1736 aaPredicted RBP12.48□□□□□ -0.41
CCDC171-203ENST00000449575 ABCC12Q96J65 1359 aa12.48□□□□□ -0.41
CCDC171-203ENST00000449575 PTPRCP08575 1304 aa12.48□□□□□ -0.41
CCDC171-203ENST00000449575 BEND3Q5T5X7 828 aa12.48□□□□□ -0.41
CCDC171-203ENST00000449575 NBPF5PQ86XG9 351 aaPredicted RBP12.48□□□□□ -0.41
CCDC171-203ENST00000449575 NEURL1BA8MQ27 555 aa12.47□□□□□ -0.41
CCDC171-203ENST00000449575 RGL2O15211 777 aa12.47□□□□□ -0.41
CCDC171-203ENST00000449575 ERFEQ4G0M1 354 aa12.47□□□□□ -0.41
CCDC171-203ENST00000449575 FAM89AQ96GI7 184 aa12.47□□□□□ -0.41
CCDC171-203ENST00000449575 FHDC1Q9C0D6 1143 aaPredicted RBP12.47□□□□□ -0.41
CCDC171-203ENST00000449575 RLBP1P12271 317 aa12.47□□□□□ -0.41
CCDC171-203ENST00000449575 HSP90AB3PQ58FF7 597 aa12.47□□□□□ -0.41
CCDC171-203ENST00000449575 WWC3Q9ULE0 1092 aa12.47□□□□□ -0.41
CCDC171-203ENST00000449575 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
CCDC171-203ENST00000449575 CNBD1Q8NA66 436 aa12.46□□□□□ -0.41
CCDC171-203ENST00000449575 NLGN2Q8NFZ4 835 aa12.46□□□□□ -0.41
CCDC171-203ENST00000449575 MYH3P11055 1940 aa12.46□□□□□ -0.41
CCDC171-203ENST00000449575 C10orf71Q711Q0 1435 aa12.46□□□□□ -0.41
CCDC171-203ENST00000449575 ATF7IPQ6VMQ6 1270 aa12.46□□□□□ -0.42
CCDC171-203ENST00000449575 C3orf67Q6ZVT6 689 aa12.46□□□□□ -0.42
CCDC171-203ENST00000449575 TRMT112Q9UI30 125 aaKnown RBP12.46□□□□□ -0.42
CCDC171-203ENST00000449575 BRCA1P38398 1863 aaKnown RBP12.46□□□□□ -0.42
CCDC171-203ENST00000449575 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
CCDC171-203ENST00000449575 NBR1Q14596 966 aa12.45□□□□□ -0.42
CCDC171-203ENST00000449575 LINS1Q8NG48 757 aa12.45□□□□□ -0.42
CCDC171-203ENST00000449575 HCLS1P14317 486 aaPredicted RBP12.45□□□□□ -0.42
CCDC171-203ENST00000449575 NEXNQ0ZGT2 675 aa12.45□□□□□ -0.42
CCDC171-203ENST00000449575 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
CCDC171-203ENST00000449575 C20orf194Q5TEA3 1177 aa12.45□□□□□ -0.42
CCDC171-203ENST00000449575 ZKSCAN2Q63HK3 967 aa12.45□□□□□ -0.42
CCDC171-203ENST00000449575 TPTE2Q6XPS3 522 aa12.45□□□□□ -0.42
CCDC171-203ENST00000449575 UBE2Q2Q8WVN8 375 aa12.45□□□□□ -0.42
CCDC171-203ENST00000449575 UTP14AQ9BVJ6 771 aaKnown RBP12.45□□□□□ -0.42
CCDC171-203ENST00000449575 CWC25Q9NXE8 425 aaPredicted RBP12.45□□□□□ -0.42
CCDC171-203ENST00000449575 NPHP1O15259 732 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 GCKRQ14397 625 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 CCDC191Q8NCU4 936 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 ABCC4O15439 1325 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 COL4A1P02462 1669 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 CHRNA5P30532 468 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 PPP1R42Q7Z4L9 355 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 PANK1Q8TE04 598 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 ARHGAP45Q92619 1136 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 SYT17Q9BSW7 474 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 TAOK2Q9UL54 1235 aa12.44□□□□□ -0.42
CCDC171-203ENST00000449575 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
CCDC171-203ENST00000449575 GTF2E1P29083 439 aaPredicted RBP12.43□□□□□ -0.42
CCDC171-203ENST00000449575 UBE3BQ7Z3V4 1068 aa12.43□□□□□ -0.42
CCDC171-203ENST00000449575 API5Q9BZZ5 524 aaKnown RBP12.43□□□□□ -0.42
CCDC171-203ENST00000449575 SRCIN1Q9C0H9 1055 aa12.43□□□□□ -0.42
CCDC171-203ENST00000449575 PXDNLA1KZ92 1463 aa12.43□□□□□ -0.42
CCDC171-203ENST00000449575 A0A0G2JLW4 131 aa12.43□□□□□ -0.42
CCDC171-203ENST00000449575 ANP32AP39687 249 aaKnown RBP12.43□□□□□ -0.42
CCDC171-203ENST00000449575 TMEM57Q8N5G2 664 aa12.43□□□□□ -0.42
CCDC171-203ENST00000449575 NBPF7P0C2Y1 421 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-203ENST00000449575 CASP7P55210 303 aa12.42□□□□□ -0.42
CCDC171-203ENST00000449575 ZBTB38Q8NAP3 1195 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-203ENST00000449575 NYXQ9GZU5 481 aa12.42□□□□□ -0.42
CCDC171-203ENST00000449575 SH3TC1Q8TE82 1336 aa12.42□□□□□ -0.42
CCDC171-203ENST00000449575 IBTKQ9P2D0 1353 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-203ENST00000449575 IPO8O15397 1037 aaKnown RBP12.42□□□□□ -0.42
CCDC171-203ENST00000449575 SLC51AQ86UW1 340 aa12.42□□□□□ -0.42
CCDC171-203ENST00000449575 H7C1W4 665 aa12.41□□□□□ -0.42
CCDC171-203ENST00000449575 PCCAP05165 728 aaPredicted RBP12.41□□□□□ -0.42
CCDC171-203ENST00000449575 DPEP1P16444 411 aa12.41□□□□□ -0.42
CCDC171-203ENST00000449575 KCNA3P22001 575 aa12.41□□□□□ -0.42
CCDC171-203ENST00000449575 IRX6P78412 446 aaPredicted RBP12.41□□□□□ -0.42
CCDC171-203ENST00000449575 ST5P78524 1137 aa12.41□□□□□ -0.42
CCDC171-203ENST00000449575 USP44Q9H0E7 712 aa12.41□□□□□ -0.42
CCDC171-203ENST00000449575 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
CCDC171-203ENST00000449575 IRS4O14654 1257 aaPredicted RBP12.41□□□□□ -0.42
CCDC171-203ENST00000449575 BRIP1Q9BX63 1249 aa12.41□□□□□ -0.42
CCDC171-203ENST00000449575 SPEF2Q9C093 1822 aa12.41□□□□□ -0.42
CCDC171-203ENST00000449575 ALDH1L1O75891 902 aa12.41□□□□□ -0.42
CCDC171-203ENST00000449575 INTS3Q68E01 1043 aaKnown RBP12.41□□□□□ -0.42
CCDC171-203ENST00000449575 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
CCDC171-203ENST00000449575 IPO9Q96P70 1041 aaKnown RBP12.41□□□□□ -0.42
CCDC171-203ENST00000449575 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
CCDC171-203ENST00000449575 CD2APQ9Y5K6 639 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms