RNA–Protein interactions for RNA: ENST00000448333.1

KCTD3-202, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 2

Gene KCTD3, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-202ENST00000448333 NTSR2O95665 410 aa12.51□□□□□ -0.41
KCTD3-202ENST00000448333 CALD1Q05682 793 aaKnown RBP12.51□□□□□ -0.41
KCTD3-202ENST00000448333 HSP90AB3PQ58FF7 597 aa12.51□□□□□ -0.41
KCTD3-202ENST00000448333 C7orf43Q8WVR3 580 aa12.51□□□□□ -0.41
KCTD3-202ENST00000448333 NLRP3Q96P20 1036 aa12.51□□□□□ -0.41
KCTD3-202ENST00000448333 ZNF277Q9NRM2 450 aaPredicted RBP12.51□□□□□ -0.41
KCTD3-202ENST00000448333 ZC3H4Q9UPT8 1303 aaKnown RBP12.51□□□□□ -0.41
KCTD3-202ENST00000448333 VEGFAP15692 232 aaPredicted RBP12.5□□□□□ -0.41
KCTD3-202ENST00000448333 GNAI1P63096 354 aa12.5□□□□□ -0.41
KCTD3-202ENST00000448333 RTKN2Q8IZC4 609 aa12.5□□□□□ -0.41
KCTD3-202ENST00000448333 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
KCTD3-202ENST00000448333 RBM17Q96I25 401 aaKnown RBP12.5□□□□□ -0.41
KCTD3-202ENST00000448333 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
KCTD3-202ENST00000448333 DBF4Q9UBU7 674 aaPredicted RBP12.5□□□□□ -0.41
KCTD3-202ENST00000448333 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
KCTD3-202ENST00000448333 DDNO94850 711 aaPredicted RBP12.49□□□□□ -0.41
KCTD3-202ENST00000448333 FKBP4Q02790 459 aaKnown RBP eCLIP12.49□□□□□ -0.41
KCTD3-202ENST00000448333 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
KCTD3-202ENST00000448333 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
KCTD3-202ENST00000448333 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
KCTD3-202ENST00000448333 SYNE4Q8N205 404 aa12.49□□□□□ -0.41
KCTD3-202ENST00000448333 TMX4Q9H1E5 349 aaPredicted RBP12.49□□□□□ -0.41
KCTD3-202ENST00000448333 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
KCTD3-202ENST00000448333 TRMT112Q9UI30 125 aaKnown RBP12.49□□□□□ -0.41
KCTD3-202ENST00000448333 SALL2Q9Y467 1007 aaPredicted RBP12.49□□□□□ -0.41
KCTD3-202ENST00000448333 ATP5J2-PTCD1G3V325 749 aa12.48□□□□□ -0.41
KCTD3-202ENST00000448333 HOXB7P09629 217 aa12.48□□□□□ -0.41
KCTD3-202ENST00000448333 ZNF853P0CG23 659 aa12.48□□□□□ -0.41
KCTD3-202ENST00000448333 HCLS1P14317 486 aaPredicted RBP12.48□□□□□ -0.41
KCTD3-202ENST00000448333 APLP1P51693 650 aa12.48□□□□□ -0.41
KCTD3-202ENST00000448333 CRY2Q49AN0 593 aa12.48□□□□□ -0.41
KCTD3-202ENST00000448333 NLRP10Q86W26 655 aa12.48□□□□□ -0.41
KCTD3-202ENST00000448333 PLBD2Q8NHP8 589 aa12.48□□□□□ -0.41
KCTD3-202ENST00000448333 HYPKQ9NX55 129 aa12.48□□□□□ -0.41
KCTD3-202ENST00000448333 FER1L6Q2WGJ9 1857 aa12.48□□□□□ -0.41
KCTD3-202ENST00000448333 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
KCTD3-202ENST00000448333 FSTL1Q12841 308 aa12.47□□□□□ -0.41
KCTD3-202ENST00000448333 RTL5Q5HYW3 569 aaPredicted RBP12.47□□□□□ -0.41
KCTD3-202ENST00000448333 SMC1BQ8NDV3 1235 aa12.47□□□□□ -0.41
KCTD3-202ENST00000448333 IBTKQ9P2D0 1353 aaPredicted RBP12.46□□□□□ -0.41
KCTD3-202ENST00000448333 TNRC6CQ9HCJ0 1690 aaKnown RBP12.46□□□□□ -0.41
KCTD3-202ENST00000448333 HOXA10P31260 410 aaPredicted RBP12.46□□□□□ -0.41
KCTD3-202ENST00000448333 IARSP41252 1262 aaKnown RBP12.46□□□□□ -0.41
KCTD3-202ENST00000448333 HTRA3P83110 453 aa12.46□□□□□ -0.41
KCTD3-202ENST00000448333 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.41
KCTD3-202ENST00000448333 RIC3Q7Z5B4 369 aa12.46□□□□□ -0.41
KCTD3-202ENST00000448333 C8orf58Q8NAV2 365 aa12.46□□□□□ -0.41
KCTD3-202ENST00000448333 CRAMP1Q96RY5 1269 aa12.46□□□□□ -0.41
KCTD3-202ENST00000448333 PHAXQ9H814 394 aaKnown RBP12.46□□□□□ -0.41
KCTD3-202ENST00000448333 TIAM2Q8IVF5 1701 aa12.45□□□□□ -0.42
KCTD3-202ENST00000448333 SH3TC1Q8TE82 1336 aa12.45□□□□□ -0.42
KCTD3-202ENST00000448333 POTECB2RU33 542 aa12.45□□□□□ -0.42
KCTD3-202ENST00000448333 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
KCTD3-202ENST00000448333 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
KCTD3-202ENST00000448333 SLC51AQ86UW1 340 aa12.45□□□□□ -0.42
KCTD3-202ENST00000448333 JDP2Q8WYK2 163 aa12.45□□□□□ -0.42
KCTD3-202ENST00000448333 TSR2Q969E8 191 aaKnown RBP12.45□□□□□ -0.42
KCTD3-202ENST00000448333 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
KCTD3-202ENST00000448333 DDX46Q7L014 1031 aaKnown RBP12.44□□□□□ -0.42
KCTD3-202ENST00000448333 WWC1Q8IX03 1113 aa12.44□□□□□ -0.42
KCTD3-202ENST00000448333 LARGE2Q8N3Y3 721 aa12.44□□□□□ -0.42
KCTD3-202ENST00000448333 TSPYL6Q8N831 410 aa12.44□□□□□ -0.42
KCTD3-202ENST00000448333 ARFGEF2Q9Y6D5 1785 aa12.43□□□□□ -0.42
KCTD3-202ENST00000448333 ABCC4O15439 1325 aa12.43□□□□□ -0.42
KCTD3-202ENST00000448333 ZNF541Q9H0D2 1346 aa12.43□□□□□ -0.42
KCTD3-202ENST00000448333 DICER1Q9UPY3 1922 aaKnown RBP12.43□□□□□ -0.42
KCTD3-202ENST00000448333 EIF6P56537 245 aaKnown RBP12.43□□□□□ -0.42
KCTD3-202ENST00000448333 EAPPQ56P03 285 aaPredicted RBP12.43□□□□□ -0.42
KCTD3-202ENST00000448333 CCDC30Q5VVM6 783 aa12.43□□□□□ -0.42
KCTD3-202ENST00000448333 FAM9BQ8IZU0 186 aa12.43□□□□□ -0.42
KCTD3-202ENST00000448333 PSMD1Q99460 953 aa12.43□□□□□ -0.42
KCTD3-202ENST00000448333 MYD88Q99836 296 aa12.43□□□□□ -0.42
KCTD3-202ENST00000448333 GJA3Q9Y6H8 435 aa12.43□□□□□ -0.42
KCTD3-202ENST00000448333 RNF123Q5XPI4 1314 aa12.42□□□□□ -0.42
KCTD3-202ENST00000448333 IQCA1LA6NCM1 817 aa12.42□□□□□ -0.42
KCTD3-202ENST00000448333 BBOX1O75936 387 aa12.42□□□□□ -0.42
KCTD3-202ENST00000448333 ISCA1Q9BUE6 129 aa12.42□□□□□ -0.42
KCTD3-202ENST00000448333 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
KCTD3-202ENST00000448333 IRS4O14654 1257 aaPredicted RBP12.41□□□□□ -0.42
KCTD3-202ENST00000448333 PPIP5K2O43314 1243 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 DDX58O95786 925 aaKnown RBP12.41□□□□□ -0.42
KCTD3-202ENST00000448333 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 POTEJP0CG39 1038 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
KCTD3-202ENST00000448333 GRAPQ13588 217 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 CCDC27Q2M243 656 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 RIC1Q4ADV7 1423 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 GRIPAP1Q4V328 841 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 NIM1KQ8IY84 436 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 MPNDQ8N594 471 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 GRAPLQ8TC17 118 aaPredicted RBP12.41□□□□□ -0.42
KCTD3-202ENST00000448333 JARID2Q92833 1246 aaPredicted RBP12.41□□□□□ -0.42
KCTD3-202ENST00000448333 STK31Q9BXU1 1019 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 CHMP4AQ9BY43 222 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
KCTD3-202ENST00000448333 FZD9O00144 591 aa12.4□□□□□ -0.42
KCTD3-202ENST00000448333 AOC3Q16853 763 aa12.4□□□□□ -0.42
KCTD3-202ENST00000448333 TWISTNBQ3B726 338 aaPredicted RBP12.4□□□□□ -0.42
KCTD3-202ENST00000448333 DPP8Q6V1X1 898 aaPredicted RBP12.4□□□□□ -0.42
KCTD3-202ENST00000448333 SP8Q8IXZ3 490 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms