RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 DUSP27Q5VZP5 1158 aa23■■□□□ 1.27
DDX56-207ENST00000448192 RPGRQ92834 1020 aaKnown RBP23■■□□□ 1.27
DDX56-207ENST00000448192 IFT57Q9NWB7 429 aa23■■□□□ 1.27
DDX56-207ENST00000448192 CRY2Q49AN0 593 aa22.99■■□□□ 1.27
DDX56-207ENST00000448192 HSP90AB3PQ58FF7 597 aa22.99■■□□□ 1.27
DDX56-207ENST00000448192 OLFM4Q6UX06 510 aa22.99■■□□□ 1.27
DDX56-207ENST00000448192 UTP14AQ9BVJ6 771 aaKnown RBP22.99■■□□□ 1.27
DDX56-207ENST00000448192 DBF4Q9UBU7 674 aaPredicted RBP22.99■■□□□ 1.27
DDX56-207ENST00000448192 CEP350Q5VT06 3117 aa22.99■■□□□ 1.27
DDX56-207ENST00000448192 RIC1Q4ADV7 1423 aa22.99■■□□□ 1.27
DDX56-207ENST00000448192 MRS2Q9HD23 443 aa22.98■■□□□ 1.27
DDX56-207ENST00000448192 ELL2O00472 640 aaPredicted RBP22.97■■□□□ 1.27
DDX56-207ENST00000448192 DPY19L2Q6NUT2 758 aa22.97■■□□□ 1.27
DDX56-207ENST00000448192 TCIRG1Q13488 830 aa22.96■■□□□ 1.27
DDX56-207ENST00000448192 RBM46Q8TBY0 533 aaKnown RBP22.96■■□□□ 1.27
DDX56-207ENST00000448192 FKBP4Q02790 459 aaKnown RBP eCLIP22.95■■□□□ 1.26
DDX56-207ENST00000448192 C3orf67Q6ZVT6 689 aa22.95■■□□□ 1.26
DDX56-207ENST00000448192 NLRP10Q86W26 655 aa22.95■■□□□ 1.26
DDX56-207ENST00000448192 RTKN2Q8IZC4 609 aa22.95■■□□□ 1.26
DDX56-207ENST00000448192 RBM17Q96I25 401 aaKnown RBP22.95■■□□□ 1.26
DDX56-207ENST00000448192 NLRP3Q96P20 1036 aa22.95■■□□□ 1.26
DDX56-207ENST00000448192 HYPKQ9NX55 129 aa22.95■■□□□ 1.26
DDX56-207ENST00000448192 VEGFAP15692 232 aaPredicted RBP22.94■■□□□ 1.26
DDX56-207ENST00000448192 HOXA10P31260 410 aaPredicted RBP22.94■■□□□ 1.26
DDX56-207ENST00000448192 ANKRD13DQ6ZTN6 518 aa22.94■■□□□ 1.26
DDX56-207ENST00000448192 PLBD2Q8NHP8 589 aa22.94■■□□□ 1.26
DDX56-207ENST00000448192 LAMB2P55268 1798 aa22.94■■□□□ 1.26
DDX56-207ENST00000448192 ZNF428Q96B54 188 aa22.93■■□□□ 1.26
DDX56-207ENST00000448192 ZNF277Q9NRM2 450 aaPredicted RBP22.93■■□□□ 1.26
DDX56-207ENST00000448192 TRMT112Q9UI30 125 aaKnown RBP22.93■■□□□ 1.26
DDX56-207ENST00000448192 WDR90Q96KV7 1748 aa22.92■■□□□ 1.26
DDX56-207ENST00000448192 TCERG1O14776 1098 aaKnown RBP22.92■■□□□ 1.26
DDX56-207ENST00000448192 SLC10A5Q5PT55 438 aa22.92■■□□□ 1.26
DDX56-207ENST00000448192 C8orf58Q8NAV2 365 aa22.92■■□□□ 1.26
DDX56-207ENST00000448192 CRAMP1Q96RY5 1269 aa22.92■■□□□ 1.26
DDX56-207ENST00000448192 RNF123Q5XPI4 1314 aa22.91■■□□□ 1.26
DDX56-207ENST00000448192 SYNE4Q8N205 404 aa22.91■■□□□ 1.26
DDX56-207ENST00000448192 HCLS1P14317 486 aaPredicted RBP22.9■■□□□ 1.26
DDX56-207ENST00000448192 FSTL1Q12841 308 aa22.9■■□□□ 1.26
DDX56-207ENST00000448192 SH3TC1Q8TE82 1336 aa22.89■■□□□ 1.26
DDX56-207ENST00000448192 ATP5J2-PTCD1G3V325 749 aa22.89■■□□□ 1.25
DDX56-207ENST00000448192 PPEF1O14829 653 aaPredicted RBP22.89■■□□□ 1.25
DDX56-207ENST00000448192 DDNO94850 711 aaPredicted RBP22.89■■□□□ 1.25
DDX56-207ENST00000448192 CC2D2BQ6DHV5 1058 aa22.89■■□□□ 1.25
DDX56-207ENST00000448192 WWC1Q8IX03 1113 aa22.89■■□□□ 1.25
DDX56-207ENST00000448192 TSR2Q969E8 191 aaKnown RBP22.89■■□□□ 1.25
DDX56-207ENST00000448192 APLP1P51693 650 aa22.88■■□□□ 1.25
DDX56-207ENST00000448192 CCDC27Q2M243 656 aa22.88■■□□□ 1.25
DDX56-207ENST00000448192 PHAXQ9H814 394 aaKnown RBP22.88■■□□□ 1.25
DDX56-207ENST00000448192 POTECB2RU33 542 aa22.87■■□□□ 1.25
DDX56-207ENST00000448192 IARSP41252 1262 aaKnown RBP22.87■■□□□ 1.25
DDX56-207ENST00000448192 RIC3Q7Z5B4 369 aa22.87■■□□□ 1.25
DDX56-207ENST00000448192 SMC1BQ8NDV3 1235 aa22.87■■□□□ 1.25
DDX56-207ENST00000448192 ISCA1Q9BUE6 129 aa22.87■■□□□ 1.25
DDX56-207ENST00000448192 DDX60Q8IY21 1712 aaKnown RBP22.87■■□□□ 1.25
DDX56-207ENST00000448192 SNED1Q8TER0 1413 aa22.86■■□□□ 1.25
DDX56-207ENST00000448192 GOLGA2Q08379 1002 aa22.86■■□□□ 1.25
DDX56-207ENST00000448192 SLC51AQ86UW1 340 aa22.86■■□□□ 1.25
DDX56-207ENST00000448192 TSPYL6Q8N831 410 aa22.86■■□□□ 1.25
DDX56-207ENST00000448192 PSMD1Q99460 953 aa22.86■■□□□ 1.25
DDX56-207ENST00000448192 TMX4Q9H1E5 349 aaPredicted RBP22.86■■□□□ 1.25
DDX56-207ENST00000448192 TAF1P21675 1872 aa22.85■■□□□ 1.25
DDX56-207ENST00000448192 ABCC4O15439 1325 aa22.85■■□□□ 1.25
DDX56-207ENST00000448192 GRIPAP1Q4V328 841 aa22.85■■□□□ 1.25
DDX56-207ENST00000448192 CCDC30Q5VVM6 783 aa22.85■■□□□ 1.25
DDX56-207ENST00000448192 CHMP4AQ9BY43 222 aa22.85■■□□□ 1.25
DDX56-207ENST00000448192 SALL2Q9Y467 1007 aaPredicted RBP22.85■■□□□ 1.25
DDX56-207ENST00000448192 RTL5Q5HYW3 569 aaPredicted RBP22.84■■□□□ 1.25
DDX56-207ENST00000448192 FAM89AQ96GI7 184 aa22.84■■□□□ 1.25
DDX56-207ENST00000448192 ZNF541Q9H0D2 1346 aa22.83■■□□□ 1.25
DDX56-207ENST00000448192 DDX46Q7L014 1031 aaKnown RBP22.83■■□□□ 1.25
DDX56-207ENST00000448192 JDP2Q8WYK2 163 aa22.83■■□□□ 1.25
DDX56-207ENST00000448192 ATP6V0A2Q9Y487 856 aa22.83■■□□□ 1.25
DDX56-207ENST00000448192 SCN4AP35499 1836 aa22.82■■□□□ 1.24
DDX56-207ENST00000448192 IL16Q14005 1332 aa22.82■■□□□ 1.24
DDX56-207ENST00000448192 BBOX1O75936 387 aa22.81■■□□□ 1.24
DDX56-207ENST00000448192 TRIM28Q13263 835 aaKnown RBP22.81■■□□□ 1.24
DDX56-207ENST00000448192 FAM9BQ8IZU0 186 aa22.81■■□□□ 1.24
DDX56-207ENST00000448192 MYD88Q99836 296 aa22.81■■□□□ 1.24
DDX56-207ENST00000448192 DDX58O95786 925 aaKnown RBP22.8■■□□□ 1.24
DDX56-207ENST00000448192 NCBP3Q53F19 620 aaKnown RBP22.8■■□□□ 1.24
DDX56-207ENST00000448192 LARGE2Q8N3Y3 721 aa22.8■■□□□ 1.24
DDX56-207ENST00000448192 COL4A5P29400 1685 aa22.79■■□□□ 1.24
DDX56-207ENST00000448192 IQCA1LA6NCM1 817 aa22.79■■□□□ 1.24
DDX56-207ENST00000448192 FZD9O00144 591 aa22.79■■□□□ 1.24
DDX56-207ENST00000448192 HTRA3P83110 453 aa22.79■■□□□ 1.24
DDX56-207ENST00000448192 GRAPQ13588 217 aa22.79■■□□□ 1.24
DDX56-207ENST00000448192 TWISTNBQ3B726 338 aaPredicted RBP22.79■■□□□ 1.24
DDX56-207ENST00000448192 GRAPLQ8TC17 118 aaPredicted RBP22.79■■□□□ 1.24
DDX56-207ENST00000448192 STK31Q9BXU1 1019 aa22.79■■□□□ 1.24
DDX56-207ENST00000448192 SP8Q8IXZ3 490 aa22.78■■□□□ 1.24
DDX56-207ENST00000448192 L3MBTL3Q96JM7 780 aaPredicted RBP22.78■■□□□ 1.24
DDX56-207ENST00000448192 IRS4O14654 1257 aaPredicted RBP22.77■■□□□ 1.24
DDX56-207ENST00000448192 EIF6P56537 245 aaKnown RBP22.77■■□□□ 1.24
DDX56-207ENST00000448192 PPIP5K2O43314 1243 aa22.76■■□□□ 1.23
DDX56-207ENST00000448192 POTEIP0CG38 1075 aa22.76■■□□□ 1.23
DDX56-207ENST00000448192 POTEJP0CG39 1038 aa22.76■■□□□ 1.23
DDX56-207ENST00000448192 DPP8Q6V1X1 898 aaPredicted RBP22.76■■□□□ 1.23
DDX56-207ENST00000448192 WDR63Q8IWG1 891 aa22.76■■□□□ 1.23
DDX56-207ENST00000448192 METTL22Q9BUU2 404 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms