RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 PROSER3Q2NL68 480 aa14.19□□□□□ -0.14
NPIPB3-202ENST00000448012 DUSP27Q5VZP5 1158 aa14.19□□□□□ -0.14
NPIPB3-202ENST00000448012 SMC1BQ8NDV3 1235 aa14.19□□□□□ -0.14
NPIPB3-202ENST00000448012 MRS2Q9HD23 443 aa14.19□□□□□ -0.14
NPIPB3-202ENST00000448012 MBIPQ9NS73 344 aa14.19□□□□□ -0.14
NPIPB3-202ENST00000448012 UBN2Q6ZU65 1347 aa14.18□□□□□ -0.14
NPIPB3-202ENST00000448012 TCIRG1Q13488 830 aa14.18□□□□□ -0.14
NPIPB3-202ENST00000448012 CRY2Q49AN0 593 aa14.18□□□□□ -0.14
NPIPB3-202ENST00000448012 TRMT112Q9UI30 125 aaKnown RBP14.18□□□□□ -0.14
NPIPB3-202ENST00000448012 ABCC12Q96J65 1359 aa14.18□□□□□ -0.14
NPIPB3-202ENST00000448012 RIC1Q4ADV7 1423 aa14.17□□□□□ -0.14
NPIPB3-202ENST00000448012 ANKRD31Q8N7Z5 1873 aa14.17□□□□□ -0.14
NPIPB3-202ENST00000448012 NTSR2O95665 410 aa14.17□□□□□ -0.14
NPIPB3-202ENST00000448012 GOLGA2Q08379 1002 aa14.17□□□□□ -0.14
NPIPB3-202ENST00000448012 ANKRD13DQ6ZTN6 518 aa14.17□□□□□ -0.14
NPIPB3-202ENST00000448012 PLBD2Q8NHP8 589 aa14.17□□□□□ -0.14
NPIPB3-202ENST00000448012 C7orf43Q8WVR3 580 aa14.17□□□□□ -0.14
NPIPB3-202ENST00000448012 JDP2Q8WYK2 163 aa14.17□□□□□ -0.14
NPIPB3-202ENST00000448012 CRAMP1Q96RY5 1269 aa14.17□□□□□ -0.14
NPIPB3-202ENST00000448012 PPEF1O14829 653 aaPredicted RBP14.16□□□□□ -0.14
NPIPB3-202ENST00000448012 HOXA10P31260 410 aaPredicted RBP14.16□□□□□ -0.14
NPIPB3-202ENST00000448012 PRELPP51888 382 aa14.16□□□□□ -0.14
NPIPB3-202ENST00000448012 LRP10Q7Z4F1 713 aa14.16□□□□□ -0.14
NPIPB3-202ENST00000448012 SH3TC1Q8TE82 1336 aa14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 COL11A2P13942 1736 aaPredicted RBP14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 IQCA1LA6NCM1 817 aa14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 ELL2O00472 640 aaPredicted RBP14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 DDX58O95786 925 aaKnown RBP14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 HSP90B1P14625 803 aaKnown RBP14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 CCDC30Q5VVM6 783 aa14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 DDX46Q7L014 1031 aaKnown RBP14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 RIC3Q7Z5B4 369 aa14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 NLRP10Q86W26 655 aa14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 SYNE4Q8N205 404 aa14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 ZNF277Q9NRM2 450 aaPredicted RBP14.15□□□□□ -0.14
NPIPB3-202ENST00000448012 TCERG1O14776 1098 aaKnown RBP14.14□□□□□ -0.15
NPIPB3-202ENST00000448012 ZNF853P0CG23 659 aa14.14□□□□□ -0.15
NPIPB3-202ENST00000448012 IARSP41252 1262 aaKnown RBP14.14□□□□□ -0.15
NPIPB3-202ENST00000448012 SLC10A5Q5PT55 438 aa14.14□□□□□ -0.15
NPIPB3-202ENST00000448012 PSMD1Q99460 953 aa14.14□□□□□ -0.15
NPIPB3-202ENST00000448012 EIF6P56537 245 aaKnown RBP14.13□□□□□ -0.15
NPIPB3-202ENST00000448012 SUPT20HQ8NEM7 779 aa14.13□□□□□ -0.15
NPIPB3-202ENST00000448012 STK31Q9BXU1 1019 aa14.13□□□□□ -0.15
NPIPB3-202ENST00000448012 TNRC6CQ9HCJ0 1690 aaKnown RBP14.12□□□□□ -0.15
NPIPB3-202ENST00000448012 BBOX1O75936 387 aa14.12□□□□□ -0.15
NPIPB3-202ENST00000448012 DDNO94850 711 aaPredicted RBP14.12□□□□□ -0.15
NPIPB3-202ENST00000448012 HCLS1P14317 486 aaPredicted RBP14.12□□□□□ -0.15
NPIPB3-202ENST00000448012 CCDC27Q2M243 656 aa14.12□□□□□ -0.15
NPIPB3-202ENST00000448012 OLFM4Q6UX06 510 aa14.12□□□□□ -0.15
NPIPB3-202ENST00000448012 LARGE2Q8N3Y3 721 aa14.12□□□□□ -0.15
NPIPB3-202ENST00000448012 SLX4Q8IY92 1834 aa14.12□□□□□ -0.15
NPIPB3-202ENST00000448012 ATP5J2-PTCD1G3V325 749 aa14.11□□□□□ -0.15
NPIPB3-202ENST00000448012 TMC4Q7Z404 712 aa14.11□□□□□ -0.15
NPIPB3-202ENST00000448012 ATP6V0A2Q9Y487 856 aa14.11□□□□□ -0.15
NPIPB3-202ENST00000448012 SBF1O95248 1867 aa14.1□□□□□ -0.15
NPIPB3-202ENST00000448012 CCDC184Q52MB2 194 aa14.1□□□□□ -0.15
NPIPB3-202ENST00000448012 WWC1Q8IX03 1113 aa14.1□□□□□ -0.15
NPIPB3-202ENST00000448012 NIM1KQ8IY84 436 aa14.1□□□□□ -0.15
NPIPB3-202ENST00000448012 NUP98P52948 1817 aa14.1□□□□□ -0.15
NPIPB3-202ENST00000448012 PPIP5K2O43314 1243 aa14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 LMOD1P29536 600 aaPredicted RBP14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 NCBP3Q53F19 620 aaKnown RBP14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 DPP8Q6V1X1 898 aaPredicted RBP14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 C3orf67Q6ZVT6 689 aa14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 C8orf58Q8NAV2 365 aa14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 ISCA1Q9BUE6 129 aa14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 VPS33BQ9H267 617 aa14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 HACL1Q9UJ83 578 aa14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 TIAM2Q8IVF5 1701 aa14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 ABCC4O15439 1325 aa14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 IL16Q14005 1332 aa14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 ARFGEF2Q9Y6D5 1785 aa14.09□□□□□ -0.15
NPIPB3-202ENST00000448012 FER1L6Q2WGJ9 1857 aa14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 NEXNQ0ZGT2 675 aa14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 TRIM28Q13263 835 aaKnown RBP14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 GRAPQ13588 217 aa14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 CHADLQ6NUI6 762 aa14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 SP8Q8IXZ3 490 aa14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 GPC2Q8N158 579 aa14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 MPNDQ8N594 471 aa14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 GRAPLQ8TC17 118 aaPredicted RBP14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 FAM89AQ96GI7 184 aa14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 L3MBTL3Q96JM7 780 aaPredicted RBP14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 MYD88Q99836 296 aa14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 GJA3Q9Y6H8 435 aa14.08□□□□□ -0.16
NPIPB3-202ENST00000448012 FZD9O00144 591 aa14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 IRS4O14654 1257 aaPredicted RBP14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 TWISTNBQ3B726 338 aaPredicted RBP14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 EAPPQ56P03 285 aaPredicted RBP14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 RTL5Q5HYW3 569 aaPredicted RBP14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 PNMA8AQ86V59 439 aaPredicted RBP14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 CCDC191Q8NCU4 936 aa14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 TSR2Q969E8 191 aaKnown RBP14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 ZNF428Q96B54 188 aa14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 PHAXQ9H814 394 aaKnown RBP14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 CWC25Q9NXE8 425 aaPredicted RBP14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 SALL2Q9Y467 1007 aaPredicted RBP14.07□□□□□ -0.16
NPIPB3-202ENST00000448012 LDHDQ86WU2 507 aa14.06□□□□□ -0.16
NPIPB3-202ENST00000448012 WDR63Q8IWG1 891 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms