RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 FAM89AQ96GI7 184 aa10.75□□□□□ -0.69
TTC39A-212ENST00000447632 SETDB2Q96T68 719 aa10.75□□□□□ -0.69
TTC39A-212ENST00000447632 PPP1R1BQ9UD71 204 aaPredicted RBP10.75□□□□□ -0.69
TTC39A-212ENST00000447632 PTPRCP08575 1304 aa10.75□□□□□ -0.69
TTC39A-212ENST00000447632 MMP10P09238 476 aa10.75□□□□□ -0.69
TTC39A-212ENST00000447632 GTF2E1P29083 439 aaPredicted RBP10.75□□□□□ -0.69
TTC39A-212ENST00000447632 BEND3Q5T5X7 828 aa10.75□□□□□ -0.69
TTC39A-212ENST00000447632 SUSD4Q5VX71 490 aa10.75□□□□□ -0.69
TTC39A-212ENST00000447632 TJP1Q07157 1748 aa10.75□□□□□ -0.69
TTC39A-212ENST00000447632 ERVV-1B6SEH8 477 aa10.74□□□□□ -0.69
TTC39A-212ENST00000447632 BRPF1P55201 1214 aaPredicted RBP10.74□□□□□ -0.69
TTC39A-212ENST00000447632 KLHL34Q8N239 644 aa10.74□□□□□ -0.69
TTC39A-212ENST00000447632 SRCIN1Q9C0H9 1055 aa10.74□□□□□ -0.69
TTC39A-212ENST00000447632 C4BP0C0L5 1744 aa10.74□□□□□ -0.69
TTC39A-212ENST00000447632 LY75O60449 1722 aa10.74□□□□□ -0.69
TTC39A-212ENST00000447632 HMGB2P26583 209 aaKnown RBP10.74□□□□□ -0.69
TTC39A-212ENST00000447632 CCDC85AQ96PX6 553 aaPredicted RBP10.74□□□□□ -0.69
TTC39A-212ENST00000447632 TRMT112Q9UI30 125 aaKnown RBP10.74□□□□□ -0.69
TTC39A-212ENST00000447632 WWC3Q9ULE0 1092 aa10.74□□□□□ -0.69
TTC39A-212ENST00000447632 ZNF652Q9Y2D9 606 aa10.74□□□□□ -0.69
TTC39A-212ENST00000447632 UBN2Q6ZU65 1347 aa10.73□□□□□ -0.69
TTC39A-212ENST00000447632 NLGN1Q8N2Q7 840 aa10.73□□□□□ -0.69
TTC39A-212ENST00000447632 ARHGAP45Q92619 1136 aa10.73□□□□□ -0.69
TTC39A-212ENST00000447632 C9orf78Q9NZ63 289 aaPredicted RBP10.73□□□□□ -0.69
TTC39A-212ENST00000447632 NEURL1BA8MQ27 555 aa10.73□□□□□ -0.69
TTC39A-212ENST00000447632 NBPF7P0C2Y1 421 aaPredicted RBP10.73□□□□□ -0.69
TTC39A-212ENST00000447632 NLRP10Q86W26 655 aa10.73□□□□□ -0.69
TTC39A-212ENST00000447632 NBPF5PQ86XG9 351 aaPredicted RBP10.73□□□□□ -0.69
TTC39A-212ENST00000447632 C1orf115Q9H7X2 142 aa10.73□□□□□ -0.69
TTC39A-212ENST00000447632 HCLS1P14317 486 aaPredicted RBP10.72□□□□□ -0.69
TTC39A-212ENST00000447632 DDR1Q08345 913 aa10.72□□□□□ -0.69
TTC39A-212ENST00000447632 CLEC4GQ6UXB4 293 aa10.72□□□□□ -0.69
TTC39A-212ENST00000447632 UBE3BQ7Z3V4 1068 aa10.72□□□□□ -0.69
TTC39A-212ENST00000447632 ZNF34Q8IZ26 560 aa10.72□□□□□ -0.69
TTC39A-212ENST00000447632 LINS1Q8NG48 757 aa10.72□□□□□ -0.69
TTC39A-212ENST00000447632 SERPINB2P05120 415 aa10.72□□□□□ -0.69
TTC39A-212ENST00000447632 MEIS3Q99687 375 aa10.72□□□□□ -0.69
TTC39A-212ENST00000447632 PCDHB15Q9Y5E8 787 aa10.72□□□□□ -0.69
TTC39A-212ENST00000447632 TM4SF1P30408 202 aa10.71□□□□□ -0.69
TTC39A-212ENST00000447632 GCKRQ14397 625 aa10.71□□□□□ -0.69
TTC39A-212ENST00000447632 ISCA1Q9BUE6 129 aa10.71□□□□□ -0.69
TTC39A-212ENST00000447632 USP44Q9H0E7 712 aa10.71□□□□□ -0.69
TTC39A-212ENST00000447632 CWC25Q9NXE8 425 aaPredicted RBP10.71□□□□□ -0.69
TTC39A-212ENST00000447632 ERFEQ4G0M1 354 aa10.71□□□□□ -0.7
TTC39A-212ENST00000447632 HSP90AB3PQ58FF7 597 aa10.71□□□□□ -0.7
TTC39A-212ENST00000447632 UTP14AQ9BVJ6 771 aaKnown RBP10.71□□□□□ -0.7
TTC39A-212ENST00000447632 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.71□□□□□ -0.7
TTC39A-212ENST00000447632 PARP3Q9Y6F1 533 aa10.71□□□□□ -0.7
TTC39A-212ENST00000447632 CCT4P50991 539 aaKnown RBP10.7□□□□□ -0.7
TTC39A-212ENST00000447632 POLRMTO00411 1230 aaKnown RBP10.7□□□□□ -0.7
TTC39A-212ENST00000447632 INTS3Q68E01 1043 aaKnown RBP10.7□□□□□ -0.7
TTC39A-212ENST00000447632 TPTE2Q6XPS3 522 aa10.7□□□□□ -0.7
TTC39A-212ENST00000447632 CCDC191Q8NCU4 936 aa10.7□□□□□ -0.7
TTC39A-212ENST00000447632 ABCC4O15439 1325 aa10.69□□□□□ -0.7
TTC39A-212ENST00000447632 TAF1LQ8IZX4 1826 aa10.69□□□□□ -0.7
TTC39A-212ENST00000447632 MVPQ14764 893 aaKnown RBP10.69□□□□□ -0.7
TTC39A-212ENST00000447632 PPP1R42Q7Z4L9 355 aa10.69□□□□□ -0.7
TTC39A-212ENST00000447632 MTFR1LQ9H019 292 aa10.69□□□□□ -0.7
TTC39A-212ENST00000447632 SLKQ9H2G2 1235 aaPredicted RBP10.69□□□□□ -0.7
TTC39A-212ENST00000447632 GRM8O00222 908 aa10.69□□□□□ -0.7
TTC39A-212ENST00000447632 ZBTB7BO15156 539 aaPredicted RBP10.69□□□□□ -0.7
TTC39A-212ENST00000447632 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
TTC39A-212ENST00000447632 IRS4O14654 1257 aaPredicted RBP10.68□□□□□ -0.7
TTC39A-212ENST00000447632 C3orf67Q6ZVT6 689 aa10.68□□□□□ -0.7
TTC39A-212ENST00000447632 CNBD1Q8NA66 436 aa10.68□□□□□ -0.7
TTC39A-212ENST00000447632 COL5A3P25940 1745 aaPredicted RBP10.68□□□□□ -0.7
TTC39A-212ENST00000447632 ALDH1L1O75891 902 aa10.68□□□□□ -0.7
TTC39A-212ENST00000447632 TRIM28Q13263 835 aaKnown RBP10.68□□□□□ -0.7
TTC39A-212ENST00000447632 EPHA10Q5JZY3 1008 aa10.68□□□□□ -0.7
TTC39A-212ENST00000447632 PRR5LQ6MZQ0 368 aa10.68□□□□□ -0.7
TTC39A-212ENST00000447632 SLC16A10Q8TF71 515 aa10.68□□□□□ -0.7
TTC39A-212ENST00000447632 PDZRN3Q9UPQ7 1066 aa10.68□□□□□ -0.7
TTC39A-212ENST00000447632 NTSR2O95665 410 aa10.67□□□□□ -0.7
TTC39A-212ENST00000447632 UBTFL1P0CB47 393 aaPredicted RBP10.67□□□□□ -0.7
TTC39A-212ENST00000447632 PARP10Q53GL7 1025 aa10.67□□□□□ -0.7
TTC39A-212ENST00000447632 ZBTB38Q8NAP3 1195 aaPredicted RBP10.67□□□□□ -0.7
TTC39A-212ENST00000447632 SUCLG2Q96I99 432 aa10.67□□□□□ -0.7
TTC39A-212ENST00000447632 ANTXR1Q9H6X2 564 aa10.67□□□□□ -0.7
TTC39A-212ENST00000447632 LRRFIP2Q9Y608 721 aaKnown RBP10.67□□□□□ -0.7
TTC39A-212ENST00000447632 H7C1W4 665 aa10.67□□□□□ -0.7
TTC39A-212ENST00000447632 POLD1P28340 1107 aa10.67□□□□□ -0.7
TTC39A-212ENST00000447632 SH3TC1Q8TE82 1336 aa10.67□□□□□ -0.7
TTC39A-212ENST00000447632 BECN1Q14457 450 aa10.66□□□□□ -0.7
TTC39A-212ENST00000447632 SPON1Q9HCB6 807 aa10.66□□□□□ -0.7
TTC39A-212ENST00000447632 NUP188Q5SRE5 1749 aa10.66□□□□□ -0.7
TTC39A-212ENST00000447632 KAZALD1Q96I82 304 aa10.66□□□□□ -0.7
TTC39A-212ENST00000447632 TBC1D32Q96NH3 1257 aa10.66□□□□□ -0.7
TTC39A-212ENST00000447632 DDX19BQ9UMR2 479 aa10.66□□□□□ -0.7
TTC39A-212ENST00000447632 PCCAP05165 728 aaPredicted RBP10.65□□□□□ -0.7
TTC39A-212ENST00000447632 PTGER2P43116 358 aa10.65□□□□□ -0.7
TTC39A-212ENST00000447632 LMBR1LQ6UX01 489 aa10.65□□□□□ -0.7
TTC39A-212ENST00000447632 BICC1Q9H694 974 aaKnown RBP10.65□□□□□ -0.7
TTC39A-212ENST00000447632 UBR3Q6ZT12 1888 aa10.65□□□□□ -0.7
TTC39A-212ENST00000447632 LAMB4A4D0S4 1761 aa10.65□□□□□ -0.7
TTC39A-212ENST00000447632 CARMIL3Q8ND23 1372 aa10.65□□□□□ -0.7
TTC39A-212ENST00000447632 A0A0G2JLW4 131 aa10.65□□□□□ -0.7
TTC39A-212ENST00000447632 CHRNA5P30532 468 aa10.65□□□□□ -0.7
TTC39A-212ENST00000447632 KLHDC4Q8TBB5 520 aa10.65□□□□□ -0.7
TTC39A-212ENST00000447632 TBC1D2Q9BYX2 928 aa10.65□□□□□ -0.7
TTC39A-212ENST00000447632 NYXQ9GZU5 481 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms