RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.35□□□□□ -1.873e-9■■■□□ 16.8
CHD9-203ENST00000447540 SMARCE1Q969G3 411 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 CALR3Q96L12 384 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 SH2B1Q9NRF2 756 aaPredicted RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 SYNJ1O43426 1573 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 CREB3O43889 395 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 HOXA7P31268 230 aaPredicted RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 ANKRD1Q15327 319 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 CCDC26Q8TAB7 109 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 CCDC28BQ9BUN5 200 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 PLEKHG2Q9H7P9 1386 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 TTC41PQ6P2S7 1318 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 CCDC27Q2M243 656 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 SESTD1Q86VW0 696 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 IMPDH2P12268 514 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 ETF1P62495 437 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 TUBA4AP68366 448 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 CCDC174Q6PII3 467 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 PHLDB2Q86SQ0 1253 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 NUP62CLQ9H1M0 184 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 MYO1AQ9UBC5 1043 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 ANKRD30BQ9BXX2 1392 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 IL16Q14005 1332 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 RPGRIP1LQ68CZ1 1315 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 LRRD1A4D1F6 860 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 DDR1Q08345 913 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 TSNAXIP1Q2TAA8 658 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 HSP90AA5PQ58FG0 334 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 DZIP1LQ8IYY4 767 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 MAK16Q9BXY0 300 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 ERBB4Q15303 1308 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 PHLPP2Q6ZVD8 1323 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 EIF3CLB5ME19 914 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 NCBP1Q09161 790 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 DZIP1Q86YF9 867 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 MIEF2Q96C03 454 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 C16orf45Q96MC5 204 aaPredicted RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 EIF3CQ99613 913 aaKnown RBP3.35□□□□□ -1.87
CHD9-203ENST00000447540 ANO10Q9NW15 660 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 DACH1Q9UI36 760 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 ADAM21Q9UKJ8 722 aa3.35□□□□□ -1.87
CHD9-203ENST00000447540 E7ENQ6 273 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 KINO60870 393 aaKnown RBP3.34□□□□□ -1.87
CHD9-203ENST00000447540 PNMA6AP0CW24 399 aaPredicted RBP3.34□□□□□ -1.87
CHD9-203ENST00000447540 KRT72Q14CN4 511 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 TEX9Q8N6V9 391 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 C17orf50Q8WW18 174 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 SRCIN1Q9C0H9 1055 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 NDUFA13Q9P0J0 144 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 YTHDF3Q7Z739 585 aaKnown RBP3.34□□□□□ -1.87
CHD9-203ENST00000447540 SLC4A1APQ9BWU0 796 aaKnown RBP3.34□□□□□ -1.87
CHD9-203ENST00000447540 SYNPO2Q9UMS6 1093 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 TBC1D12O60347 775 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 CCDC159P0C7I6 412 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 CCAR2Q8N163 923 aaKnown RBP3.34□□□□□ -1.87
CHD9-203ENST00000447540 AFAP1L1Q8TED9 768 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 RRP36Q96EU6 259 aaKnown RBP3.34□□□□□ -1.87
CHD9-203ENST00000447540 PPP6R1Q9UPN7 881 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 AQRO60306 1485 aaKnown RBP eCLIP3.34□□□□□ -1.875e-7■■□□□ 14.2
CHD9-203ENST00000447540 IMMTQ16891 758 aaKnown RBP3.34□□□□□ -1.87
CHD9-203ENST00000447540 RUFY2Q8WXA3 655 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 DDX12PQ92771 950 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 L3MBTL2Q969R5 705 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 CCDC102AQ96A19 550 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 RGL1Q9NZL6 768 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 GSTA2P09210 222 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 SNCBQ16143 134 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 RBM12BQ8IXT5 1001 aaKnown RBP3.34□□□□□ -1.87
CHD9-203ENST00000447540 TMEM87AQ8NBN3 555 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 NAA15Q9BXJ9 866 aaKnown RBP3.34□□□□□ -1.87
CHD9-203ENST00000447540 API5Q9BZZ5 524 aaKnown RBP3.34□□□□□ -1.87
CHD9-203ENST00000447540 THEGQ9P2T0 379 aa3.34□□□□□ -1.87
CHD9-203ENST00000447540 RPAP1Q9BWH6 1393 aaPredicted RBP3.34□□□□□ -1.88
CHD9-203ENST00000447540 SOX12O15370 315 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 ROR2Q01974 943 aaKnown RBP3.34□□□□□ -1.88
CHD9-203ENST00000447540 PARVBQ9HBI1 364 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 KCND1Q9NSA2 647 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 LRRC9Q6ZRR7 1453 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 SMIM24O75264 130 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 MYBPC2Q14324 1141 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 CCDC121Q6ZUS5 278 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.34□□□□□ -1.882e-7■■■■■ 50.8
CHD9-203ENST00000447540 ALS2CR12Q96Q35 445 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 EXOC1Q9NV70 894 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 SMC3Q9UQE7 1217 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 AKAP2Q9Y2D5 859 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 TIAM1Q13009 1591 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 AHCYL1O43865 530 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 ZKSCAN1P17029 563 aaPredicted RBP3.34□□□□□ -1.88
CHD9-203ENST00000447540 LACTBP83111 547 aaPredicted RBP3.34□□□□□ -1.88
CHD9-203ENST00000447540 CCDC96Q2M329 555 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 C11orf91Q3C1V1 193 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 WHAMMQ8TF30 809 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 PANK3Q9H999 370 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 IRAK4Q9NWZ3 460 aa3.34□□□□□ -1.88
CHD9-203ENST00000447540 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.34□□□□□ -1.88
CHD9-203ENST00000447540 PLIN1O60240 522 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 CD151P48509 253 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 AIMP1Q12904 312 aaKnown RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 SEMA3FQ13275 785 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms