RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 FMR1Q06787 632 aaKnown RBP eCLIP9.6□□□□□ -0.87
LRRC28-203ENST00000447360 GRIPAP1Q4V328 841 aa9.6□□□□□ -0.87
LRRC28-203ENST00000447360 GJA3Q9Y6H8 435 aa9.6□□□□□ -0.87
LRRC28-203ENST00000447360 SCN7AQ01118 1682 aa9.6□□□□□ -0.87
LRRC28-203ENST00000447360 TRAF5O00463 557 aa9.59□□□□□ -0.87
LRRC28-203ENST00000447360 DGKZQ13574 1117 aa9.59□□□□□ -0.87
LRRC28-203ENST00000447360 IL17REQ8NFR9 667 aa9.59□□□□□ -0.87
LRRC28-203ENST00000447360 KNSTRNQ9Y448 316 aa9.59□□□□□ -0.87
LRRC28-203ENST00000447360 SNED1Q8TER0 1413 aa9.58□□□□□ -0.88
LRRC28-203ENST00000447360 UBR2Q8IWV8 1755 aa9.58□□□□□ -0.88
LRRC28-203ENST00000447360 ARFGEF2Q9Y6D5 1785 aa9.58□□□□□ -0.88
LRRC28-203ENST00000447360 GNAT3A8MTJ3 354 aa9.58□□□□□ -0.88
LRRC28-203ENST00000447360 CRY2Q49AN0 593 aa9.58□□□□□ -0.88
LRRC28-203ENST00000447360 PCGF6Q9BYE7 350 aa9.58□□□□□ -0.88
LRRC28-203ENST00000447360 ADARB2Q9NS39 739 aaKnown RBP9.58□□□□□ -0.88
LRRC28-203ENST00000447360 TIMELESSQ9UNS1 1208 aa9.58□□□□□ -0.88
LRRC28-203ENST00000447360 NIP7Q9Y221 180 aaKnown RBP eCLIP9.58□□□□□ -0.88
LRRC28-203ENST00000447360 DIAPH1O60610 1272 aaKnown RBP9.57□□□□□ -0.88
LRRC28-203ENST00000447360 CELF2O95319 508 aaKnown RBP9.57□□□□□ -0.88
LRRC28-203ENST00000447360 NOGQ13253 232 aa9.57□□□□□ -0.88
LRRC28-203ENST00000447360 PRPF38BQ5VTL8 546 aaKnown RBP9.57□□□□□ -0.88
LRRC28-203ENST00000447360 LARGE2Q8N3Y3 721 aa9.57□□□□□ -0.88
LRRC28-203ENST00000447360 GAS2L2Q8NHY3 880 aa9.57□□□□□ -0.88
LRRC28-203ENST00000447360 USP16Q9Y5T5 823 aa9.57□□□□□ -0.88
LRRC28-203ENST00000447360 BTBD11A6QL63 1104 aa9.56□□□□□ -0.88
LRRC28-203ENST00000447360 GTF2E1P29083 439 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-203ENST00000447360 DSG3P32926 999 aa9.56□□□□□ -0.88
LRRC28-203ENST00000447360 CIAPIN1Q6FI81 312 aa9.56□□□□□ -0.88
LRRC28-203ENST00000447360 ZC3H15Q8WU90 426 aaKnown RBP9.56□□□□□ -0.88
LRRC28-203ENST00000447360 VPS33BQ9H267 617 aa9.56□□□□□ -0.88
LRRC28-203ENST00000447360 GPRC5DQ9NZD1 345 aa9.56□□□□□ -0.88
LRRC28-203ENST00000447360 PGAP2Q9UHJ9 254 aa9.56□□□□□ -0.88
LRRC28-203ENST00000447360 LTBP1Q14766 1721 aa9.56□□□□□ -0.88
LRRC28-203ENST00000447360 CEMIPQ8WUJ3 1361 aa9.55□□□□□ -0.88
LRRC28-203ENST00000447360 SNRPA1P09661 255 aaKnown RBP9.55□□□□□ -0.88
LRRC28-203ENST00000447360 HOXA10P31260 410 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-203ENST00000447360 NIM1KQ8IY84 436 aa9.55□□□□□ -0.88
LRRC28-203ENST00000447360 NYXQ9GZU5 481 aa9.55□□□□□ -0.88
LRRC28-203ENST00000447360 SAGE1Q9NXZ1 904 aa9.55□□□□□ -0.88
LRRC28-203ENST00000447360 FAM177BA6PVY3 158 aa9.54□□□□□ -0.88
LRRC28-203ENST00000447360 KCNQ3O43525 872 aa9.54□□□□□ -0.88
LRRC28-203ENST00000447360 PIP4K2AP48426 406 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-203ENST00000447360 KIF7Q2M1P5 1343 aa9.54□□□□□ -0.88
LRRC28-203ENST00000447360 CDHR2Q9BYE9 1310 aa9.54□□□□□ -0.88
LRRC28-203ENST00000447360 COL4A5P29400 1685 aa9.53□□□□□ -0.88
LRRC28-203ENST00000447360 VASPP50552 380 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-203ENST00000447360 EIF4G2P78344 907 aaKnown RBP eCLIP9.53□□□□□ -0.88
LRRC28-203ENST00000447360 CDC37L1Q7L3B6 337 aa9.53□□□□□ -0.88
LRRC28-203ENST00000447360 RPGRQ92834 1020 aaKnown RBP9.53□□□□□ -0.88
LRRC28-203ENST00000447360 CRAMP1Q96RY5 1269 aa9.53□□□□□ -0.88
LRRC28-203ENST00000447360 GLIS2Q9BZE0 524 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-203ENST00000447360 SPDYE4A6NLX3 237 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 NBPF26B4DH59 902 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 PPIP5K2O43314 1243 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 SOX10P56693 466 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 CXCL9Q07325 125 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 CACNA1SQ13698 1873 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 HLFQ16534 295 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 NBPF10Q6P3W6 841 aaKnown RBP9.52□□□□□ -0.89
LRRC28-203ENST00000447360 NBPF15Q8N660 670 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 RBM17Q96I25 401 aaKnown RBP9.52□□□□□ -0.89
LRRC28-203ENST00000447360 TMX4Q9H1E5 349 aaPredicted RBP9.52□□□□□ -0.89
LRRC28-203ENST00000447360 ZNF408Q9H9D4 720 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 ZNRF3Q9ULT6 936 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 BCORQ6W2J9 1755 aa9.52□□□□□ -0.89
LRRC28-203ENST00000447360 NPC1L1Q9UHC9 1359 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 RIC1Q4ADV7 1423 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 PRAMEF22A3QJZ6 481 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 ERVV-1B6SEH8 477 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 PPEF1O14829 653 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-203ENST00000447360 GMPSP49915 693 aaPredicted RBP9.51□□□□□ -0.89
LRRC28-203ENST00000447360 HUNKP57058 714 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 AOC3Q16853 763 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 NUTM1Q86Y26 1132 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 SUPT20HQ8NEM7 779 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 CCDC102AQ96A19 550 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 ZIC5Q96T25 663 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 CASP8AP2Q9UKL3 1982 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 CLSPNQ9HAW4 1339 aa9.51□□□□□ -0.89
LRRC28-203ENST00000447360 ABCC12Q96J65 1359 aa9.5□□□□□ -0.89
LRRC28-203ENST00000447360 U2SURPO15042 1029 aaKnown RBP9.5□□□□□ -0.89
LRRC28-203ENST00000447360 HSPA5P11021 654 aaKnown RBP9.5□□□□□ -0.89
LRRC28-203ENST00000447360 HIRAP54198 1017 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-203ENST00000447360 TNIP1Q15025 636 aa9.5□□□□□ -0.89
LRRC28-203ENST00000447360 RGMBQ6NW40 437 aa9.5□□□□□ -0.89
LRRC28-203ENST00000447360 RTFDC1Q9BY42 306 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-203ENST00000447360 TRPM7Q96QT4 1865 aa9.5□□□□□ -0.89
LRRC28-203ENST00000447360 IBTKQ9P2D0 1353 aaPredicted RBP9.5□□□□□ -0.89
LRRC28-203ENST00000447360 FAM155AB1AL88 458 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-203ENST00000447360 CTU1Q7Z7A3 348 aaKnown RBP9.49□□□□□ -0.89
LRRC28-203ENST00000447360 GCC1Q96CN9 775 aa9.49□□□□□ -0.89
LRRC28-203ENST00000447360 BCL2L13Q9BXK5 485 aa9.49□□□□□ -0.89
LRRC28-203ENST00000447360 RNF186Q9NXI6 227 aa9.49□□□□□ -0.89
LRRC28-203ENST00000447360 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
LRRC28-203ENST00000447360 H7C1D1 291 aa9.48□□□□□ -0.89
LRRC28-203ENST00000447360 TCERG1O14776 1098 aaKnown RBP9.48□□□□□ -0.89
LRRC28-203ENST00000447360 ABCB7O75027 752 aa9.48□□□□□ -0.89
LRRC28-203ENST00000447360 TRPA1O75762 1119 aa9.48□□□□□ -0.89
LRRC28-203ENST00000447360 KIF23Q02241 960 aaPredicted RBP9.48□□□□□ -0.89
LRRC28-203ENST00000447360 PKN2Q16513 984 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms