RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 RABGEF1Q9UJ41 708 aa7.97□□□□□ -1.13
PTPN3-205ENST00000447271 CPDO75976 1380 aa7.97□□□□□ -1.13
PTPN3-205ENST00000447271 ROCK1Q13464 1354 aa7.97□□□□□ -1.13
PTPN3-205ENST00000447271 CCER2I3L3R5 266 aa7.96□□□□□ -1.14
PTPN3-205ENST00000447271 NBPF1Q3BBV0 1214 aa7.96□□□□□ -1.14
PTPN3-205ENST00000447271 FBXO46Q6PJ61 603 aaPredicted RBP7.96□□□□□ -1.14
PTPN3-205ENST00000447271 STAC3Q96MF2 364 aa7.96□□□□□ -1.14
PTPN3-205ENST00000447271 CCDC87Q9NVE4 849 aa7.96□□□□□ -1.14
PTPN3-205ENST00000447271 KIAA1468Q9P260 1216 aa7.96□□□□□ -1.14
PTPN3-205ENST00000447271 STK26Q9P289 416 aa7.96□□□□□ -1.14
PTPN3-205ENST00000447271 SEPT9Q9UHD8 586 aaPredicted RBP7.96□□□□□ -1.14
PTPN3-205ENST00000447271 SLIT3O75094 1523 aa7.96□□□□□ -1.14
PTPN3-205ENST00000447271 ABCC6O95255 1503 aa7.96□□□□□ -1.14
PTPN3-205ENST00000447271 TAF1LQ8IZX4 1826 aa7.96□□□□□ -1.14
PTPN3-205ENST00000447271 A0A1W2PPC1 479 aa7.95□□□□□ -1.14
PTPN3-205ENST00000447271 CST9Q5W186 159 aa7.95□□□□□ -1.14
PTPN3-205ENST00000447271 SYTL4Q96C24 671 aaPredicted RBP7.95□□□□□ -1.14
PTPN3-205ENST00000447271 FAM198AQ9UFP1 575 aa7.95□□□□□ -1.14
PTPN3-205ENST00000447271 UBR3Q6ZT12 1888 aa7.95□□□□□ -1.14
PTPN3-205ENST00000447271 TOGARAM1Q9Y4F4 1720 aa7.95□□□□□ -1.14
PTPN3-205ENST00000447271 BCAMP50895 628 aa7.94□□□□□ -1.14
PTPN3-205ENST00000447271 ERFEQ4G0M1 354 aa7.94□□□□□ -1.14
PTPN3-205ENST00000447271 AMIGO3Q86WK7 504 aa7.94□□□□□ -1.14
PTPN3-205ENST00000447271 NBPF3Q9H094 633 aa7.94□□□□□ -1.14
PTPN3-205ENST00000447271 CDHR5Q9HBB8 845 aa7.94□□□□□ -1.14
PTPN3-205ENST00000447271 RNF186Q9NXI6 227 aa7.94□□□□□ -1.14
PTPN3-205ENST00000447271 E9PCH4 1651 aa7.94□□□□□ -1.14
PTPN3-205ENST00000447271 RPTORQ8N122 1335 aa7.94□□□□□ -1.14
PTPN3-205ENST00000447271 ATRXP46100 2492 aa7.94□□□□□ -1.14
PTPN3-205ENST00000447271 TRIM6-TRIM34B2RNG4 842 aa7.93□□□□□ -1.14
PTPN3-205ENST00000447271 EIF4G2P78344 907 aaKnown RBP eCLIP7.93□□□□□ -1.14
PTPN3-205ENST00000447271 NOGQ13253 232 aa7.93□□□□□ -1.14
PTPN3-205ENST00000447271 INTS3Q68E01 1043 aaKnown RBP7.93□□□□□ -1.14
PTPN3-205ENST00000447271 SAPCD2Q86UD0 394 aa7.93□□□□□ -1.14
PTPN3-205ENST00000447271 MPHOSPH9Q99550 1183 aa7.93□□□□□ -1.14
PTPN3-205ENST00000447271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.92□□□□□ -1.14
PTPN3-205ENST00000447271 SPDYE16A6NNV3 312 aaPredicted RBP7.92□□□□□ -1.14
PTPN3-205ENST00000447271 MAP3K7O43318 606 aa7.92□□□□□ -1.14
PTPN3-205ENST00000447271 SLC24A1O60721 1099 aa7.92□□□□□ -1.14
PTPN3-205ENST00000447271 OSBPP22059 807 aa7.92□□□□□ -1.14
PTPN3-205ENST00000447271 MAP3K11Q16584 847 aa7.92□□□□□ -1.14
PTPN3-205ENST00000447271 AK7Q96M32 723 aa7.92□□□□□ -1.14
PTPN3-205ENST00000447271 GTF3C3Q9Y5Q9 886 aa7.92□□□□□ -1.14
PTPN3-205ENST00000447271 ANKRD30AQ9BXX3 1397 aa7.92□□□□□ -1.14
PTPN3-205ENST00000447271 ZDBF2Q9HCK1 2354 aa7.91□□□□□ -1.14
PTPN3-205ENST00000447271 GRXCR2A6NFK2 248 aa7.91□□□□□ -1.14
PTPN3-205ENST00000447271 NEFLP07196 543 aa7.91□□□□□ -1.14
PTPN3-205ENST00000447271 COL9A2Q14055 689 aaPredicted RBP7.91□□□□□ -1.14
PTPN3-205ENST00000447271 SYNE4Q8N205 404 aa7.91□□□□□ -1.14
PTPN3-205ENST00000447271 NGDNQ8NEJ9 315 aaKnown RBP7.91□□□□□ -1.14
PTPN3-205ENST00000447271 WDR17Q8IZU2 1322 aa7.91□□□□□ -1.14
PTPN3-205ENST00000447271 PPLO60437 1756 aa7.91□□□□□ -1.14
PTPN3-205ENST00000447271 NCOR1O75376 2440 aa7.91□□□□□ -1.14
PTPN3-205ENST00000447271 C4BP0C0L5 1744 aa7.9□□□□□ -1.14
PTPN3-205ENST00000447271 ACEP12821 1306 aa7.9□□□□□ -1.14
PTPN3-205ENST00000447271 GOLGA8CPA6NN73 597 aa7.9□□□□□ -1.14
PTPN3-205ENST00000447271 CHRNA5P30532 468 aa7.9□□□□□ -1.14
PTPN3-205ENST00000447271 EPHX2P34913 555 aa7.9□□□□□ -1.14
PTPN3-205ENST00000447271 PNMA8AQ86V59 439 aaPredicted RBP7.9□□□□□ -1.14
PTPN3-205ENST00000447271 DPF3Q92784 378 aa7.9□□□□□ -1.14
PTPN3-205ENST00000447271 HHIPL1Q96JK4 782 aa7.9□□□□□ -1.14
PTPN3-205ENST00000447271 ZFRQ96KR1 1074 aaKnown RBP7.9□□□□□ -1.14
PTPN3-205ENST00000447271 YTHDC1Q96MU7 727 aaKnown RBP7.9□□□□□ -1.14
PTPN3-205ENST00000447271 C1QTNF1Q9BXJ1 281 aa7.9□□□□□ -1.14
PTPN3-205ENST00000447271 HACL1Q9UJ83 578 aa7.9□□□□□ -1.14
PTPN3-205ENST00000447271 C4AP0C0L4 1744 aa7.89□□□□□ -1.15
PTPN3-205ENST00000447271 NFKBIEO00221 500 aa7.89□□□□□ -1.15
PTPN3-205ENST00000447271 TRAF5O00463 557 aa7.89□□□□□ -1.15
PTPN3-205ENST00000447271 KCNV2Q8TDN2 545 aa7.89□□□□□ -1.15
PTPN3-205ENST00000447271 SIN3AQ96ST3 1273 aa7.89□□□□□ -1.15
PTPN3-205ENST00000447271 CARD10Q9BWT7 1032 aa7.89□□□□□ -1.15
PTPN3-205ENST00000447271 CHIC2Q9UKJ5 165 aa7.89□□□□□ -1.15
PTPN3-205ENST00000447271 PPIP5K1Q6PFW1 1433 aa7.88□□□□□ -1.15
PTPN3-205ENST00000447271 SOWAHBA6NEL2 793 aa7.88□□□□□ -1.15
PTPN3-205ENST00000447271 SMAPO00193 183 aa7.88□□□□□ -1.15
PTPN3-205ENST00000447271 CSB-PGBD3P0DP91 1061 aa7.88□□□□□ -1.15
PTPN3-205ENST00000447271 TJAP1Q5JTD0 557 aa7.88□□□□□ -1.15
PTPN3-205ENST00000447271 WDR70Q9NW82 654 aa7.88□□□□□ -1.15
PTPN3-205ENST00000447271 RGPD5Q99666 1765 aa7.88□□□□□ -1.15
PTPN3-205ENST00000447271 HTTP42858 3142 aa7.87□□□□□ -1.15
PTPN3-205ENST00000447271 ANKARQ7Z5J8 1434 aa7.87□□□□□ -1.15
PTPN3-205ENST00000447271 NSD3Q9BZ95 1437 aa7.87□□□□□ -1.15
PTPN3-205ENST00000447271 MLLT3P42568 568 aaPredicted RBP7.87□□□□□ -1.15
PTPN3-205ENST00000447271 DDX10Q13206 875 aaKnown RBP7.87□□□□□ -1.15
PTPN3-205ENST00000447271 LAPTM4BQ86VI4 370 aa7.87□□□□□ -1.15
PTPN3-205ENST00000447271 ANKK1Q8NFD2 765 aa7.87□□□□□ -1.15
PTPN3-205ENST00000447271 ZNF296Q8WUU4 475 aaPredicted RBP7.87□□□□□ -1.15
PTPN3-205ENST00000447271 PARP3Q9Y6F1 533 aa7.87□□□□□ -1.15
PTPN3-205ENST00000447271 DOT1LQ8TEK3 1739 aa7.86□□□□□ -1.15
PTPN3-205ENST00000447271 USP47Q96K76 1375 aa7.86□□□□□ -1.15
PTPN3-205ENST00000447271 GCP02774 474 aa7.86□□□□□ -1.15
PTPN3-205ENST00000447271 HMGB2P26583 209 aaKnown RBP7.86□□□□□ -1.15
PTPN3-205ENST00000447271 CDCA7LQ96GN5 454 aa7.86□□□□□ -1.15
PTPN3-205ENST00000447271 TRANK1O15050 2925 aa7.86□□□□□ -1.15
PTPN3-205ENST00000447271 SETXQ7Z333 2677 aaKnown RBP7.85□□□□□ -1.15
PTPN3-205ENST00000447271 BDP1A6H8Y1 2624 aa7.85□□□□□ -1.15
PTPN3-205ENST00000447271 KIF7Q2M1P5 1343 aa7.85□□□□□ -1.15
PTPN3-205ENST00000447271 CELF2O95319 508 aaKnown RBP7.85□□□□□ -1.15
PTPN3-205ENST00000447271 SSFA2P28290 1259 aa7.85□□□□□ -1.15
PTPN3-205ENST00000447271 PRSS12P56730 875 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms