RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 CRNKL1Q9BZJ0 848 aaKnown RBP8.16□□□□□ -1.1
CDK12-202ENST00000447079 KRT23Q9C075 422 aa8.16□□□□□ -1.1
CDK12-202ENST00000447079 BMP15O95972 392 aa8.16□□□□□ -1.1
CDK12-202ENST00000447079 UPF3BQ9BZI7 483 aaKnown RBP8.16□□□□□ -1.1
CDK12-202ENST00000447079 CCDC183Q5T5S1 534 aa8.16□□□□□ -1.1
CDK12-202ENST00000447079 LRRC59Q96AG4 307 aaKnown RBP8.16□□□□□ -1.1
CDK12-202ENST00000447079 GOLGA6L10A6NI86 522 aa8.16□□□□□ -1.1
CDK12-202ENST00000447079 ANAPC15P60006 121 aa8.16□□□□□ -1.1
CDK12-202ENST00000447079 ARAP3Q8WWN8 1544 aa8.16□□□□□ -1.1
CDK12-202ENST00000447079 DYNC1I1O14576 645 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 BAG4O95429 457 aaKnown RBP8.15□□□□□ -1.1
CDK12-202ENST00000447079 GNAT2P19087 354 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 AMPD3Q01432 767 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 ZRSR2Q15696 482 aaKnown RBP8.15□□□□□ -1.1
CDK12-202ENST00000447079 AXDND1Q5T1B0 1012 aaPredicted RBP8.15□□□□□ -1.1
CDK12-202ENST00000447079 LDHAL6AQ6ZMR3 332 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 ANO10Q9NW15 660 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 A0A1W2PP64 1363 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 MINDY4BA8MYZ0 360 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 GIMAP7Q8NHV1 300 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 DCAF5Q96JK2 942 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 SETDB2Q96T68 719 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 POLR1AO95602 1720 aaPredicted RBP8.15□□□□□ -1.1
CDK12-202ENST00000447079 TTC41PQ6P2S7 1318 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 GRM8O00222 908 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 STXBP4Q6ZWJ1 553 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 CCDC150Q8NCX0 1101 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 TANGO6Q9C0B7 1094 aa8.15□□□□□ -1.1
CDK12-202ENST00000447079 ERICH4A6NGS2 130 aa8.15□□□□□ -1.11
CDK12-202ENST00000447079 MCM5P33992 734 aa8.15□□□□□ -1.11
CDK12-202ENST00000447079 VPS36Q86VN1 386 aa8.15□□□□□ -1.11
CDK12-202ENST00000447079 RBM27Q9P2N5 1060 aaKnown RBP8.15□□□□□ -1.11
CDK12-202ENST00000447079 NBPF6Q5VWK0 638 aa8.15□□□□□ -1.11
CDK12-202ENST00000447079 KSR2Q6VAB6 950 aa8.15□□□□□ -1.11
CDK12-202ENST00000447079 UBE3BQ7Z3V4 1068 aa8.15□□□□□ -1.11
CDK12-202ENST00000447079 NBPF5PQ86XG9 351 aaPredicted RBP8.15□□□□□ -1.11
CDK12-202ENST00000447079 CERS3Q8IU89 383 aa8.15□□□□□ -1.11
CDK12-202ENST00000447079 NBPF4Q96M43 638 aa8.15□□□□□ -1.11
CDK12-202ENST00000447079 ZSCAN16Q9H4T2 348 aaPredicted RBP8.15□□□□□ -1.11
CDK12-202ENST00000447079 CGNQ9P2M7 1197 aaKnown RBP8.15□□□□□ -1.11
CDK12-202ENST00000447079 NCOA7Q8NI08 942 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 PLCG2P16885 1265 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 CETN2P41208 172 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 PRPF40BQ6NWY9 871 aaKnown RBP8.14□□□□□ -1.11
CDK12-202ENST00000447079 MFSD6Q6ZSS7 791 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 IL15P40933 162 aaPredicted RBP8.14□□□□□ -1.11
CDK12-202ENST00000447079 NUCB1Q02818 461 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 TTC22Q5TAA0 569 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 ZHX3Q9H4I2 956 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 INCENPQ9NQS7 918 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 PI4KAP2A4QPH2 592 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 HOXB7P09629 217 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 BRPF1P55201 1214 aaPredicted RBP8.14□□□□□ -1.11
CDK12-202ENST00000447079 CCDC181Q5TID7 509 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 PI4KAP1Q8N8J0 262 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 MYOM2P54296 1465 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 CCDC184Q52MB2 194 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 FKBP15Q5T1M5 1219 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 DDB1Q16531 1140 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 JAKMIP3Q5VZ66 844 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 ZNF804AQ7Z570 1209 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 FAM107BQ9H098 131 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 GOLGA8BA8MQT2 603 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 IFIT3O14879 490 aaKnown RBP8.14□□□□□ -1.11
CDK12-202ENST00000447079 GNAQP50148 359 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 GTPBP4Q9BZE4 634 aaKnown RBP8.14□□□□□ -1.11
CDK12-202ENST00000447079 PRDM10Q9NQV6 1147 aa8.14□□□□□ -1.11
CDK12-202ENST00000447079 IP6K1Q92551 441 aa8.13□□□□□ -1.11
CDK12-202ENST00000447079 CCDC194A0A1B0GVG4 234 aa8.13□□□□□ -1.11
CDK12-202ENST00000447079 CABP5Q9NP86 173 aa8.13□□□□□ -1.11
CDK12-202ENST00000447079 MCM3P25205 808 aa8.13□□□□□ -1.11
CDK12-202ENST00000447079 CBX1P83916 185 aa8.13□□□□□ -1.11
CDK12-202ENST00000447079 FAM114A1Q8IWE2 563 aa8.13□□□□□ -1.11
CDK12-202ENST00000447079 CEP152O94986 1710 aa8.13□□□□□ -1.11
CDK12-202ENST00000447079 RANBP6O60518 1105 aaKnown RBP8.13□□□□□ -1.11
CDK12-202ENST00000447079 CLCN1P35523 988 aa8.13□□□□□ -1.11
CDK12-202ENST00000447079 ATP6V1AP38606 617 aa8.13□□□□□ -1.11
CDK12-202ENST00000447079 MATR3P43243 847 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDK12-202ENST00000447079 EIF4A2Q14240 407 aaKnown RBP8.13□□□□□ -1.11
CDK12-202ENST00000447079 CCDC96Q2M329 555 aa8.13□□□□□ -1.11
CDK12-202ENST00000447079 DDX19AQ9NUU7 478 aaKnown RBP8.13□□□□□ -1.11
CDK12-202ENST00000447079 F6X3S4 739 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 BBXQ8WY36 941 aaPredicted RBP8.12□□□□□ -1.11
CDK12-202ENST00000447079 CALML4Q96GE6 196 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 NLRP3Q96P20 1036 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 KAT14Q9H8E8 782 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 HDAC9Q9UKV0 1011 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 EPB41L2O43491 1005 aaKnown RBP8.12□□□□□ -1.11
CDK12-202ENST00000447079 NEMFO60524 1076 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 CETN1Q12798 172 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 ANKRD2Q9GZV1 360 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 CHPF2Q9P2E5 772 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 CCDC85AQ96PX6 553 aaPredicted RBP8.12□□□□□ -1.11
CDK12-202ENST00000447079 SPINK5Q9NQ38 1064 aaPredicted RBP8.12□□□□□ -1.11
CDK12-202ENST00000447079 TCP11L1Q9NUJ3 509 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 RTL1A6NKG5 1358 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 C6orf229H3BNL8 230 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 ZSCAN12O43309 604 aa8.12□□□□□ -1.11
CDK12-202ENST00000447079 ZHX1Q9UKY1 873 aaPredicted RBP8.12□□□□□ -1.11
CDK12-202ENST00000447079 GOLGA8AA7E2F4 631 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms