RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 RAB27AP51159 221 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 ZNF132P52740 706 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 NEDD9Q14511 834 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 CCDC80Q76M96 950 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 MKS1Q9NXB0 559 aa10.1□□□□□ -0.79
MCF2L2-203ENST00000447025 RTN2O75298 545 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 PARNO95453 639 aaKnown RBP10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 COL19A1Q14993 1142 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 TMEM110Q86TL2 294 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 C3orf20Q8ND61 904 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 MAP3K20Q9NYL2 800 aaKnown RBP10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 SWAP70Q9UH65 585 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 AMOTL2Q9Y2J4 779 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 BRD4O60885 1362 aaPredicted RBP10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 GOLGA3Q08378 1498 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 EME2A4GXA9 379 aaPredicted RBP10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 E2F6O75461 281 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 SMARCA1P28370 1054 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 NUCB2P80303 420 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 GPS2Q13227 327 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 TMEM165Q9HC07 324 aa10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.09□□□□□ -0.79
MCF2L2-203ENST00000447025 FOSL1P15407 271 aa10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 NSUN2Q08J23 767 aaKnown RBP eCLIP10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 NBPF8Q3BBV2 869 aa10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 ANKRD18AQ8IVF6 992 aa10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 CDCA7Q9BWT1 371 aaPredicted RBP10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 INO80BQ9C086 356 aaPredicted RBP10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 LRRFIP2Q9Y608 721 aaKnown RBP10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 KIF13AQ9H1H9 1805 aa10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 GIMAP6Q6P9H5 292 aa10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 CLASRPQ8N2M8 674 aaKnown RBP10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 GINM1Q9NU53 330 aa10.08□□□□□ -0.8
MCF2L2-203ENST00000447025 MYCLP1P12525 358 aaPredicted RBP10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 IQCB1Q15051 598 aa10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 GBP6Q6ZN66 633 aa10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 NEK11Q8NG66 645 aa10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 NACC2Q96BF6 587 aa10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 KTN1Q86UP2 1357 aaKnown RBP10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 BOLA2-SMG1P6H3BVE0 249 aa10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 PRIM1P49642 420 aaKnown RBP10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 UBE2Q1Q7Z7E8 422 aa10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 GIMAP1Q8WWP7 306 aa10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 TCP11Q8WWU5 503 aa10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 EZH1Q92800 747 aaPredicted RBP10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 ZSCAN16Q9H4T2 348 aaPredicted RBP10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 KDRP35968 1356 aa10.07□□□□□ -0.8
MCF2L2-203ENST00000447025 TRIM37O94972 964 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 RTN3O95197 1032 aaPredicted RBP10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 ATICP31939 592 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 CDR1P51861 262 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 MNAT1P51948 309 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 ZNF445P59923 1031 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 SNX1Q13596 522 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 KRT72Q14CN4 511 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 POSTNQ15063 836 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 PARP9Q8IXQ6 854 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 PMFBP1Q8TBY8 1022 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 SCLT1Q96NL6 688 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 TMEM63CQ9P1W3 806 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 ANKIB1Q9P2G1 1089 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 V9GYY5 206 aaPredicted RBP10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 KIF21BO75037 1637 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 CEP162Q5TB80 1403 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 EIF3CLB5ME19 914 aaKnown RBP10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 IVLP07476 585 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 ATXN8OSP0DMR3 200 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 ENPP1P22413 925 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 CORO7P57737 925 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 ZRSR1Q15695 479 aaKnown RBP10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 ARMC9Q7Z3E5 817 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 CCDC65Q8IXS2 484 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 EIF3CQ99613 913 aaKnown RBP10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 RBSNQ9H1K0 784 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 ODF2LQ9ULJ1 636 aa10.06□□□□□ -0.8
MCF2L2-203ENST00000447025 USP19O94966 1318 aa10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 SNAPC4Q5SXM2 1469 aa10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 MAGI1Q96QZ7 1491 aaPredicted RBP10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 BBOX1O75936 387 aa10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 MRPL12P52815 198 aaKnown RBP10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 FAAH2Q6GMR7 532 aa10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 CLEC17AQ6ZS10 378 aa10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 RETREG2Q8NC44 543 aa10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 CTCFLQ8NI51 663 aaPredicted RBP10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 PARD3BQ8TEW8 1205 aa10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 MMADHCQ9H3L0 296 aaPredicted RBP10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 GABBR1Q9UBS5 961 aa10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 CLIP2Q9UDT6 1046 aa10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 MCM8Q9UJA3 840 aa10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 G3BP2Q9UN86 482 aaKnown RBP10.05□□□□□ -0.8
MCF2L2-203ENST00000447025 LRRC10BA6NIK2 292 aa10.04□□□□□ -0.8
MCF2L2-203ENST00000447025 ERLIN1O75477 346 aa10.04□□□□□ -0.8
MCF2L2-203ENST00000447025 MPP3Q13368 585 aa10.04□□□□□ -0.8
MCF2L2-203ENST00000447025 LRRC31Q6UY01 552 aa10.04□□□□□ -0.8
MCF2L2-203ENST00000447025 PACS1Q6VY07 963 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms