RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 CCDC191Q8NCU4 936 aa28.04■■■□□ 2.08
APOE-204ENST00000446996 MYD88Q99836 296 aa28.04■■■□□ 2.08
APOE-204ENST00000446996 BRCA1P38398 1863 aaKnown RBP28.04■■■□□ 2.08
APOE-204ENST00000446996 A0A0G2JLW4 131 aa28.03■■■□□ 2.08
APOE-204ENST00000446996 H0YIN7 160 aa28.03■■■□□ 2.08
APOE-204ENST00000446996 KCNA3P22001 575 aa28.03■■■□□ 2.08
APOE-204ENST00000446996 DNAAF4Q8WXU2 420 aa28.03■■■□□ 2.08
APOE-204ENST00000446996 DLEC1Q9Y238 1755 aa28.02■■■□□ 2.08
APOE-204ENST00000446996 PTPRCP08575 1304 aa28.02■■■□□ 2.08
APOE-204ENST00000446996 ATP5J2-PTCD1G3V325 749 aa28.02■■■□□ 2.08
APOE-204ENST00000446996 ERFEQ4G0M1 354 aa28.01■■■□□ 2.07
APOE-204ENST00000446996 C2CD5Q86YS7 1000 aa28.01■■■□□ 2.07
APOE-204ENST00000446996 PIM2Q9P1W9 311 aa28.01■■■□□ 2.07
APOE-204ENST00000446996 TRMT112Q9UI30 125 aaKnown RBP28.01■■■□□ 2.07
APOE-204ENST00000446996 SH3TC1Q8TE82 1336 aa28■■■□□ 2.07
APOE-204ENST00000446996 RARSP54136 660 aaKnown RBP28■■■□□ 2.07
APOE-204ENST00000446996 NUTM1Q86Y26 1132 aa28■■■□□ 2.07
APOE-204ENST00000446996 CCDC24Q8N4L8 307 aa28■■■□□ 2.07
APOE-204ENST00000446996 SMC4Q9NTJ3 1288 aa27.99■■■□□ 2.07
APOE-204ENST00000446996 CWC25Q9NXE8 425 aaPredicted RBP27.99■■■□□ 2.07
APOE-204ENST00000446996 CHRNA5P30532 468 aa27.98■■■□□ 2.07
APOE-204ENST00000446996 LINS1Q8NG48 757 aa27.98■■■□□ 2.07
APOE-204ENST00000446996 ABCC12Q96J65 1359 aa27.98■■■□□ 2.07
APOE-204ENST00000446996 IGKV5-2P06315 115 aa27.97■■■□□ 2.07
APOE-204ENST00000446996 SRGNP10124 158 aa27.97■■■□□ 2.07
APOE-204ENST00000446996 HSP90B1P14625 803 aaKnown RBP27.97■■■□□ 2.07
APOE-204ENST00000446996 GPR162Q16538 588 aa27.97■■■□□ 2.07
APOE-204ENST00000446996 STYK1Q6J9G0 422 aa27.97■■■□□ 2.07
APOE-204ENST00000446996 ZBTB38Q8NAP3 1195 aaPredicted RBP27.97■■■□□ 2.07
APOE-204ENST00000446996 MASTLQ96GX5 879 aa27.97■■■□□ 2.07
APOE-204ENST00000446996 PCCAP05165 728 aaPredicted RBP27.96■■■□□ 2.07
APOE-204ENST00000446996 CRY2Q49AN0 593 aa27.96■■■□□ 2.07
APOE-204ENST00000446996 NLRP3Q96P20 1036 aa27.96■■■□□ 2.07
APOE-204ENST00000446996 NEURL1BA8MQ27 555 aa27.95■■■□□ 2.06
APOE-204ENST00000446996 GRIN3BO60391 1043 aa27.95■■■□□ 2.06
APOE-204ENST00000446996 ARFGEF1Q9Y6D6 1849 aa27.95■■■□□ 2.06
APOE-204ENST00000446996 NPR1P16066 1061 aa27.94■■■□□ 2.06
APOE-204ENST00000446996 DALRD3Q5D0E6 543 aaKnown RBP27.94■■■□□ 2.06
APOE-204ENST00000446996 CNKSR1Q969H4 720 aa27.94■■■□□ 2.06
APOE-204ENST00000446996 BCL2L13Q9BXK5 485 aa27.94■■■□□ 2.06
APOE-204ENST00000446996 COL11A2P13942 1736 aaPredicted RBP27.94■■■□□ 2.06
APOE-204ENST00000446996 GOLGB1Q14789 3259 aaKnown RBP27.93■■■□□ 2.06
APOE-204ENST00000446996 BEND3Q5T5X7 828 aa27.93■■■□□ 2.06
APOE-204ENST00000446996 TTLL6Q8N841 843 aa27.93■■■□□ 2.06
APOE-204ENST00000446996 TNRC6CQ9HCJ0 1690 aaKnown RBP27.92■■■□□ 2.06
APOE-204ENST00000446996 F6X3S4 739 aa27.92■■■□□ 2.06
APOE-204ENST00000446996 ARHGAP45Q92619 1136 aa27.92■■■□□ 2.06
APOE-204ENST00000446996 FAM89AQ96GI7 184 aa27.92■■■□□ 2.06
APOE-204ENST00000446996 KIF16BQ96L93 1317 aa27.92■■■□□ 2.06
APOE-204ENST00000446996 CDHR2Q9BYE9 1310 aa27.92■■■□□ 2.06
APOE-204ENST00000446996 ALDH1L1O75891 902 aa27.91■■■□□ 2.06
APOE-204ENST00000446996 YBX3P16989 372 aaKnown RBP eCLIP27.91■■■□□ 2.06
APOE-204ENST00000446996 HOXA10P31260 410 aaPredicted RBP27.91■■■□□ 2.06
APOE-204ENST00000446996 GCKRQ14397 625 aa27.91■■■□□ 2.06
APOE-204ENST00000446996 CWF19L2Q2TBE0 894 aaKnown RBP27.91■■■□□ 2.06
APOE-204ENST00000446996 ZNF622Q969S3 477 aaKnown RBP eCLIP27.91■■■□□ 2.062e-7■□□□□ 8.5
APOE-204ENST00000446996 LAMB2P55268 1798 aa27.91■■■□□ 2.06
APOE-204ENST00000446996 ALDH1B1P30837 517 aa27.9■■■□□ 2.06
APOE-204ENST00000446996 BCS1LQ9Y276 419 aa27.9■■■□□ 2.06
APOE-204ENST00000446996 DDX60Q8IY21 1712 aaKnown RBP27.89■■■□□ 2.06
APOE-204ENST00000446996 H7C1W4 665 aa27.89■■■□□ 2.06
APOE-204ENST00000446996 IRS4O14654 1257 aaPredicted RBP27.89■■■□□ 2.06
APOE-204ENST00000446996 PELP1Q8IZL8 1130 aaKnown RBP27.89■■■□□ 2.06
APOE-204ENST00000446996 SYNE4Q8N205 404 aa27.89■■■□□ 2.06
APOE-204ENST00000446996 API5Q9BZZ5 524 aaKnown RBP27.89■■■□□ 2.06
APOE-204ENST00000446996 NOB1Q9ULX3 412 aaKnown RBP27.89■■■□□ 2.06
APOE-204ENST00000446996 HCLS1P14317 486 aaPredicted RBP27.88■■■□□ 2.05
APOE-204ENST00000446996 YY1P25490 414 aa27.88■■■□□ 2.05
APOE-204ENST00000446996 SF3B3Q15393 1217 aaKnown RBP27.88■■■□□ 2.05
APOE-204ENST00000446996 SRCIN1Q9C0H9 1055 aa27.88■■■□□ 2.05
APOE-204ENST00000446996 IPO8O15397 1037 aaKnown RBP27.87■■■□□ 2.05
APOE-204ENST00000446996 RPGRQ92834 1020 aaKnown RBP27.87■■■□□ 2.05
APOE-204ENST00000446996 RBM17Q96I25 401 aaKnown RBP27.87■■■□□ 2.05
APOE-204ENST00000446996 CRAMP1Q96RY5 1269 aa27.87■■■□□ 2.05
APOE-204ENST00000446996 PDE8AO60658 829 aa27.85■■■□□ 2.05
APOE-204ENST00000446996 SLC4A10Q6U841 1118 aa27.85■■■□□ 2.05
APOE-204ENST00000446996 C3orf67Q6ZVT6 689 aa27.84■■■□□ 2.05
APOE-204ENST00000446996 SLX4Q8IY92 1834 aa27.83■■■□□ 2.05
APOE-204ENST00000446996 BCAR3O75815 825 aa27.83■■■□□ 2.05
APOE-204ENST00000446996 CASP7P55210 303 aa27.83■■■□□ 2.05
APOE-204ENST00000446996 PLA2G12BQ9BX93 195 aa27.83■■■□□ 2.05
APOE-204ENST00000446996 WWC3Q9ULE0 1092 aa27.83■■■□□ 2.05
APOE-204ENST00000446996 CHD4Q14839 1912 aa27.82■■■□□ 2.04
APOE-204ENST00000446996 RTL5Q5HYW3 569 aaPredicted RBP27.82■■■□□ 2.04
APOE-204ENST00000446996 SOGA3Q5TF21 947 aa27.82■■■□□ 2.04
APOE-204ENST00000446996 PRPF40BQ6NWY9 871 aaKnown RBP27.82■■■□□ 2.04
APOE-204ENST00000446996 MYH3P11055 1940 aa27.82■■■□□ 2.04
APOE-204ENST00000446996 CACNA1SQ13698 1873 aa27.81■■■□□ 2.04
APOE-204ENST00000446996 CCT4P50991 539 aaKnown RBP27.81■■■□□ 2.04
APOE-204ENST00000446996 GRM8O00222 908 aa27.8■■■□□ 2.04
APOE-204ENST00000446996 DDX46Q7L014 1031 aaKnown RBP27.8■■■□□ 2.04
APOE-204ENST00000446996 UBE3BQ7Z3V4 1068 aa27.8■■■□□ 2.04
APOE-204ENST00000446996 UTYO14607 1347 aa27.79■■■□□ 2.04
APOE-204ENST00000446996 ATF7IPQ6VMQ6 1270 aa27.79■■■□□ 2.04
APOE-204ENST00000446996 C7orf43Q8WVR3 580 aa27.79■■■□□ 2.04
APOE-204ENST00000446996 BBOX1O75936 387 aa27.78■■■□□ 2.04
APOE-204ENST00000446996 CCDC152Q4G0S7 254 aa27.78■■■□□ 2.04
APOE-204ENST00000446996 ZKSCAN2Q63HK3 967 aa27.78■■■□□ 2.04
APOE-204ENST00000446996 CC2D2BQ6DHV5 1058 aa27.78■■■□□ 2.04
APOE-204ENST00000446996 JARID2Q92833 1246 aaPredicted RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms