RNA–Protein interactions for RNA: ENST00000446764.5

GARNL3-209, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-209ENST00000446764 CNKSR1Q969H4 720 aa26.77■■□□□ 1.88
GARNL3-209ENST00000446764 NPR1P16066 1061 aa26.76■■□□□ 1.87
GARNL3-209ENST00000446764 BRCA1P38398 1863 aaKnown RBP26.76■■□□□ 1.87
GARNL3-209ENST00000446764 RNF123Q5XPI4 1314 aa26.75■■□□□ 1.87
GARNL3-209ENST00000446764 TRIM28Q13263 835 aaKnown RBP26.75■■□□□ 1.87
GARNL3-209ENST00000446764 SLC10A5Q5PT55 438 aa26.75■■□□□ 1.87
GARNL3-209ENST00000446764 CDCA7LQ96GN5 454 aa26.75■■□□□ 1.87
GARNL3-209ENST00000446764 TRMT112Q9UI30 125 aaKnown RBP26.75■■□□□ 1.87
GARNL3-209ENST00000446764 RIC1Q4ADV7 1423 aa26.74■■□□□ 1.87
GARNL3-209ENST00000446764 CRY2Q49AN0 593 aa26.74■■□□□ 1.87
GARNL3-209ENST00000446764 ZNF428Q96B54 188 aa26.74■■□□□ 1.87
GARNL3-209ENST00000446764 MYD88Q99836 296 aa26.74■■□□□ 1.87
GARNL3-209ENST00000446764 KSR2Q6VAB6 950 aa26.73■■□□□ 1.87
GARNL3-209ENST00000446764 SYNE4Q8N205 404 aa26.73■■□□□ 1.87
GARNL3-209ENST00000446764 METTL22Q9BUU2 404 aaPredicted RBP26.73■■□□□ 1.87
GARNL3-209ENST00000446764 MAP3K2Q9Y2U5 619 aa26.73■■□□□ 1.87
GARNL3-209ENST00000446764 SH3TC1Q8TE82 1336 aa26.72■■□□□ 1.87
GARNL3-209ENST00000446764 PI4KAP2A4QPH2 592 aa26.72■■□□□ 1.87
GARNL3-209ENST00000446764 PRPF40BQ6NWY9 871 aaKnown RBP26.72■■□□□ 1.87
GARNL3-209ENST00000446764 C3orf67Q6ZVT6 689 aa26.72■■□□□ 1.87
GARNL3-209ENST00000446764 PI4KAP1Q8N8J0 262 aa26.72■■□□□ 1.87
GARNL3-209ENST00000446764 COL11A2P13942 1736 aaPredicted RBP26.71■■□□□ 1.87
GARNL3-209ENST00000446764 C21orf2O43822 256 aa26.71■■□□□ 1.87
GARNL3-209ENST00000446764 FLIIQ13045 1269 aa26.71■■□□□ 1.87
GARNL3-209ENST00000446764 NLRP3Q96P20 1036 aa26.71■■□□□ 1.87
GARNL3-209ENST00000446764 ZNF219Q9P2Y4 722 aaPredicted RBP26.71■■□□□ 1.87
GARNL3-209ENST00000446764 DLEC1Q9Y238 1755 aa26.71■■□□□ 1.87
GARNL3-209ENST00000446764 ADCY9O60503 1353 aa26.71■■□□□ 1.87
GARNL3-209ENST00000446764 TRMT2AQ8IZ69 625 aaKnown RBP26.7■■□□□ 1.86
GARNL3-209ENST00000446764 HCLS1P14317 486 aaPredicted RBP26.69■■□□□ 1.86
GARNL3-209ENST00000446764 ALDH1B1P30837 517 aa26.68■■□□□ 1.86
GARNL3-209ENST00000446764 HOXA10P31260 410 aaPredicted RBP26.68■■□□□ 1.86
GARNL3-209ENST00000446764 CCDC191Q8NCU4 936 aa26.68■■□□□ 1.86
GARNL3-209ENST00000446764 RPGRQ92834 1020 aaKnown RBP26.68■■□□□ 1.86
GARNL3-209ENST00000446764 FAM89AQ96GI7 184 aa26.68■■□□□ 1.86
GARNL3-209ENST00000446764 TNRC6CQ9HCJ0 1690 aaKnown RBP26.68■■□□□ 1.86
GARNL3-209ENST00000446764 FKBP5Q13451 457 aaPredicted RBP26.67■■□□□ 1.86
GARNL3-209ENST00000446764 ZNF784Q8NCA9 323 aaPredicted RBP26.67■■□□□ 1.86
GARNL3-209ENST00000446764 C7orf43Q8WVR3 580 aa26.67■■□□□ 1.86
GARNL3-209ENST00000446764 RASSF7Q02833 373 aa26.66■■□□□ 1.86
GARNL3-209ENST00000446764 ANKRD36CQ5JPF3 1778 aa26.66■■□□□ 1.86
GARNL3-209ENST00000446764 ARFGEF1Q9Y6D6 1849 aa26.65■■□□□ 1.86
GARNL3-209ENST00000446764 NFKBIEO00221 500 aa26.65■■□□□ 1.86
GARNL3-209ENST00000446764 IGKV5-2P06315 115 aa26.65■■□□□ 1.86
GARNL3-209ENST00000446764 RTL5Q5HYW3 569 aaPredicted RBP26.65■■□□□ 1.86
GARNL3-209ENST00000446764 ZBTB38Q8NAP3 1195 aaPredicted RBP26.65■■□□□ 1.86
GARNL3-209ENST00000446764 RBM17Q96I25 401 aaKnown RBP26.65■■□□□ 1.86
GARNL3-209ENST00000446764 CWC25Q9NXE8 425 aaPredicted RBP26.65■■□□□ 1.86
GARNL3-209ENST00000446764 ARFGEF2Q9Y6D5 1785 aa26.64■■□□□ 1.86
GARNL3-209ENST00000446764 C9orf131Q5VYM1 1079 aa26.64■■□□□ 1.86
GARNL3-209ENST00000446764 CRAMP1Q96RY5 1269 aa26.64■■□□□ 1.86
GARNL3-209ENST00000446764 CHD4Q14839 1912 aa26.63■■□□□ 1.85
GARNL3-209ENST00000446764 NEXNQ0ZGT2 675 aa26.63■■□□□ 1.85
GARNL3-209ENST00000446764 SOGA3Q5TF21 947 aa26.63■■□□□ 1.85
GARNL3-209ENST00000446764 IRS4O14654 1257 aaPredicted RBP26.62■■□□□ 1.85
GARNL3-209ENST00000446764 PRELPP51888 382 aa26.62■■□□□ 1.85
GARNL3-209ENST00000446764 HNRNPUQ00839 825 aaKnown RBP eCLIP26.62■■□□□ 1.85
GARNL3-209ENST00000446764 DNAAF4Q8WXU2 420 aa26.62■■□□□ 1.85
GARNL3-209ENST00000446764 PCCAP05165 728 aaPredicted RBP26.61■■□□□ 1.85
GARNL3-209ENST00000446764 CWF19L2Q2TBE0 894 aaKnown RBP26.61■■□□□ 1.85
GARNL3-209ENST00000446764 NEURL1BA8MQ27 555 aa26.6■■□□□ 1.85
GARNL3-209ENST00000446764 CCDC93Q567U6 631 aa26.6■■□□□ 1.85
GARNL3-209ENST00000446764 OLFM4Q6UX06 510 aa26.6■■□□□ 1.85
GARNL3-209ENST00000446764 JARID2Q92833 1246 aaPredicted RBP26.6■■□□□ 1.85
GARNL3-209ENST00000446764 RNF181Q9P0P0 153 aa26.6■■□□□ 1.85
GARNL3-209ENST00000446764 LMNB1P20700 586 aa26.59■■□□□ 1.85
GARNL3-209ENST00000446764 SF3B3Q15393 1217 aaKnown RBP26.59■■□□□ 1.85
GARNL3-209ENST00000446764 MRPL50Q8N5N7 158 aaKnown RBP26.59■■□□□ 1.85
GARNL3-209ENST00000446764 SLX4Q8IY92 1834 aa26.58■■□□□ 1.85
GARNL3-209ENST00000446764 F6X3S4 739 aa26.58■■□□□ 1.85
GARNL3-209ENST00000446764 SSH1Q8WYL5 1049 aa26.58■■□□□ 1.85
GARNL3-209ENST00000446764 ABCC4O15439 1325 aa26.58■■□□□ 1.85
GARNL3-209ENST00000446764 PPEF1O14829 653 aaPredicted RBP26.57■■□□□ 1.84
GARNL3-209ENST00000446764 LINS1Q8NG48 757 aa26.57■■□□□ 1.84
GARNL3-209ENST00000446764 TAOK3Q9H2K8 898 aa26.57■■□□□ 1.84
GARNL3-209ENST00000446764 LTBP3Q9NS15 1303 aa26.57■■□□□ 1.84
GARNL3-209ENST00000446764 DDX46Q7L014 1031 aaKnown RBP26.56■■□□□ 1.84
GARNL3-209ENST00000446764 CT47B1P0C2W7 299 aaPredicted RBP26.55■■□□□ 1.84
GARNL3-209ENST00000446764 HSP90B1P14625 803 aaKnown RBP26.55■■□□□ 1.84
GARNL3-209ENST00000446764 GCKRQ14397 625 aa26.55■■□□□ 1.84
GARNL3-209ENST00000446764 RTKN2Q8IZC4 609 aa26.55■■□□□ 1.84
GARNL3-209ENST00000446764 GRAPQ13588 217 aa26.54■■□□□ 1.84
GARNL3-209ENST00000446764 ALDH1L2Q3SY69 923 aa26.54■■□□□ 1.84
GARNL3-209ENST00000446764 BEND3Q5T5X7 828 aa26.54■■□□□ 1.84
GARNL3-209ENST00000446764 CC2D2BQ6DHV5 1058 aa26.54■■□□□ 1.84
GARNL3-209ENST00000446764 SLC51AQ86UW1 340 aa26.54■■□□□ 1.84
GARNL3-209ENST00000446764 GRAPLQ8TC17 118 aaPredicted RBP26.54■■□□□ 1.84
GARNL3-209ENST00000446764 CDHR2Q9BYE9 1310 aa26.54■■□□□ 1.84
GARNL3-209ENST00000446764 H7C1W4 665 aa26.53■■□□□ 1.84
GARNL3-209ENST00000446764 PDE8AO60658 829 aa26.53■■□□□ 1.84
GARNL3-209ENST00000446764 BBOX1O75936 387 aa26.53■■□□□ 1.84
GARNL3-209ENST00000446764 FKBP4Q02790 459 aaKnown RBP eCLIP26.53■■□□□ 1.84
GARNL3-209ENST00000446764 ZNF526Q8TF50 670 aaPredicted RBP26.53■■□□□ 1.84
GARNL3-209ENST00000446764 BCL2L13Q9BXK5 485 aa26.53■■□□□ 1.84
GARNL3-209ENST00000446764 ATP6V0A2Q9Y487 856 aa26.52■■□□□ 1.84
GARNL3-209ENST00000446764 SNED1Q8TER0 1413 aa26.51■■□□□ 1.83
GARNL3-209ENST00000446764 UBE3BQ7Z3V4 1068 aa26.5■■□□□ 1.83
GARNL3-209ENST00000446764 SMC4Q9NTJ3 1288 aa26.5■■□□□ 1.83
GARNL3-209ENST00000446764 PTPRCP08575 1304 aa26.49■■□□□ 1.83
GARNL3-209ENST00000446764 DDX60Q8IY21 1712 aaKnown RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms