RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 UBE3BQ7Z3V4 1068 aa9.54□□□□□ -0.88
SF3A3P1-201ENST00000446317 NLRP10Q86W26 655 aa9.54□□□□□ -0.88
SF3A3P1-201ENST00000446317 CHMP4AQ9BY43 222 aa9.54□□□□□ -0.88
SF3A3P1-201ENST00000446317 C9orf78Q9NZ63 289 aaPredicted RBP9.54□□□□□ -0.88
SF3A3P1-201ENST00000446317 TRMT112Q9UI30 125 aaKnown RBP9.54□□□□□ -0.88
SF3A3P1-201ENST00000446317 SCN7AQ01118 1682 aa9.54□□□□□ -0.88
SF3A3P1-201ENST00000446317 MMP10P09238 476 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 BRPF1P55201 1214 aaPredicted RBP9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 SLC51AQ86UW1 340 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 ARHGAP45Q92619 1136 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 SUCLG2Q96I99 432 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 SETDB2Q96T68 719 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 ISCA1Q9BUE6 129 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 CWC25Q9NXE8 425 aaPredicted RBP9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 PPP1R1BQ9UD71 204 aaPredicted RBP9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 ZNF652Q9Y2D9 606 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 CHMP3Q9Y3E7 222 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 GTF3C3Q9Y5Q9 886 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 BCORQ6W2J9 1755 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 ERVV-1B6SEH8 477 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 GTF2E1P29083 439 aaPredicted RBP9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 CCT4P50991 539 aaKnown RBP9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 GCKRQ14397 625 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 EPHA10Q5JZY3 1008 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 INTS3Q68E01 1043 aaKnown RBP9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 C3orf67Q6ZVT6 689 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 NBPF5PQ86XG9 351 aaPredicted RBP9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 ZNF34Q8IZ26 560 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 LINS1Q8NG48 757 aa9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 LRRFIP2Q9Y608 721 aaKnown RBP9.53□□□□□ -0.88
SF3A3P1-201ENST00000446317 AFDNP55196 1824 aaKnown RBP9.52□□□□□ -0.88
SF3A3P1-201ENST00000446317 CARMIL3Q8ND23 1372 aa9.52□□□□□ -0.89
SF3A3P1-201ENST00000446317 ABCC12Q96J65 1359 aa9.52□□□□□ -0.89
SF3A3P1-201ENST00000446317 UTP14AQ9BVJ6 771 aaKnown RBP9.52□□□□□ -0.89
SF3A3P1-201ENST00000446317 USP44Q9H0E7 712 aa9.52□□□□□ -0.89
SF3A3P1-201ENST00000446317 APBB1O00213 710 aa9.51□□□□□ -0.89
SF3A3P1-201ENST00000446317 GRM8O00222 908 aa9.51□□□□□ -0.89
SF3A3P1-201ENST00000446317 POLRMTO00411 1230 aaKnown RBP9.51□□□□□ -0.89
SF3A3P1-201ENST00000446317 ZBTB7BO15156 539 aaPredicted RBP9.51□□□□□ -0.89
SF3A3P1-201ENST00000446317 NTSR2O95665 410 aa9.51□□□□□ -0.89
SF3A3P1-201ENST00000446317 SERPINB2P05120 415 aa9.51□□□□□ -0.89
SF3A3P1-201ENST00000446317 UBTFL1P0CB47 393 aaPredicted RBP9.51□□□□□ -0.89
SF3A3P1-201ENST00000446317 PRKCSHP14314 528 aaPredicted RBP9.51□□□□□ -0.89
SF3A3P1-201ENST00000446317 PDE3AQ14432 1141 aa9.51□□□□□ -0.89
SF3A3P1-201ENST00000446317 NUP98P52948 1817 aa9.51□□□□□ -0.89
SF3A3P1-201ENST00000446317 IRS4O14654 1257 aaPredicted RBP9.5□□□□□ -0.89
SF3A3P1-201ENST00000446317 HSP90AB3PQ58FF7 597 aa9.5□□□□□ -0.89
SF3A3P1-201ENST00000446317 B4GALNT3Q6L9W6 998 aa9.5□□□□□ -0.89
SF3A3P1-201ENST00000446317 FLAD1Q8NFF5 587 aa9.5□□□□□ -0.89
SF3A3P1-201ENST00000446317 KLHDC4Q8TBB5 520 aa9.5□□□□□ -0.89
SF3A3P1-201ENST00000446317 BICC1Q9H694 974 aaKnown RBP9.5□□□□□ -0.89
SF3A3P1-201ENST00000446317 PARP3Q9Y6F1 533 aa9.5□□□□□ -0.89
SF3A3P1-201ENST00000446317 ATP10DQ9P241 1426 aa9.5□□□□□ -0.89
SF3A3P1-201ENST00000446317 ALDH1L1O75891 902 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 MS4A1P11836 297 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 TM4SF1P30408 202 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 PRR5LQ6MZQ0 368 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 SKAP1Q86WV1 359 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 CNBD1Q8NA66 436 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 CCDC191Q8NCU4 936 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 KAZALD1Q96I82 304 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 ZNF219Q9P2Y4 722 aaPredicted RBP9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 DDX19BQ9UMR2 479 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 PXDNLA1KZ92 1463 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 ANKRD36CQ5JPF3 1778 aa9.49□□□□□ -0.89
SF3A3P1-201ENST00000446317 H7C1W4 665 aa9.48□□□□□ -0.89
SF3A3P1-201ENST00000446317 CASP7P55210 303 aa9.48□□□□□ -0.89
SF3A3P1-201ENST00000446317 LMBR1LQ6UX01 489 aa9.48□□□□□ -0.89
SF3A3P1-201ENST00000446317 PPP1R42Q7Z4L9 355 aa9.48□□□□□ -0.89
SF3A3P1-201ENST00000446317 NLGN1Q8N2Q7 840 aa9.48□□□□□ -0.89
SF3A3P1-201ENST00000446317 ZBTB38Q8NAP3 1195 aaPredicted RBP9.48□□□□□ -0.89
SF3A3P1-201ENST00000446317 ZNF594Q96JF6 807 aaPredicted RBP9.48□□□□□ -0.89
SF3A3P1-201ENST00000446317 SIL1Q9H173 461 aa9.48□□□□□ -0.89
SF3A3P1-201ENST00000446317 PA2G4Q9UQ80 394 aaKnown RBP9.48□□□□□ -0.89
SF3A3P1-201ENST00000446317 CASZ1Q86V15 1759 aa9.48□□□□□ -0.89
SF3A3P1-201ENST00000446317 TNRC6CQ9HCJ0 1690 aaKnown RBP9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 SH3TC1Q8TE82 1336 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 PNMA6EA0A0J9YXQ4 647 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 GNAI2P04899 355 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 PCCAP05165 728 aaPredicted RBP9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 CHRNA5P30532 468 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 FOXO4P98177 505 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 FAM161AQ3B820 660 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 PARP10Q53GL7 1025 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 CLEC4GQ6UXB4 293 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 ANKRD44Q8N8A2 993 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 SEC31BQ9NQW1 1179 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 ZBTB40Q9NUA8 1239 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 COL4A1P02462 1669 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 GNAI3P08754 354 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 ST5P78524 1137 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 SIRT2Q8IXJ6 389 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 GREM2Q9H772 168 aa9.47□□□□□ -0.89
SF3A3P1-201ENST00000446317 SRGAP3O43295 1099 aa9.46□□□□□ -0.9
SF3A3P1-201ENST00000446317 IGHDP01880 384 aa9.46□□□□□ -0.9
SF3A3P1-201ENST00000446317 CEP85Q6P2H3 762 aa9.46□□□□□ -0.9
SF3A3P1-201ENST00000446317 TPTE2Q6XPS3 522 aa9.46□□□□□ -0.9
SF3A3P1-201ENST00000446317 NYXQ9GZU5 481 aa9.46□□□□□ -0.9
SF3A3P1-201ENST00000446317 MTFR1LQ9H019 292 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms