RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 USP42Q9H9J4 1324 aaKnown RBP11.92□□□□□ -0.5
NPHP1-207ENST00000445609 PARP10Q53GL7 1025 aa11.92□□□□□ -0.5
NPHP1-207ENST00000445609 SIRT2Q8IXJ6 389 aa11.92□□□□□ -0.5
NPHP1-207ENST00000445609 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
NPHP1-207ENST00000445609 NIP7Q9Y221 180 aaKnown RBP eCLIP11.92□□□□□ -0.5
NPHP1-207ENST00000445609 CENPQQ7L2Z9 268 aaPredicted RBP11.91□□□□□ -0.5
NPHP1-207ENST00000445609 ZBTB38Q8NAP3 1195 aaPredicted RBP11.91□□□□□ -0.5
NPHP1-207ENST00000445609 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
NPHP1-207ENST00000445609 JARID2Q92833 1246 aaPredicted RBP11.91□□□□□ -0.5
NPHP1-207ENST00000445609 UBN2Q6ZU65 1347 aa11.91□□□□□ -0.5
NPHP1-207ENST00000445609 PCCAP05165 728 aaPredicted RBP11.91□□□□□ -0.5
NPHP1-207ENST00000445609 CASP7P55210 303 aa11.91□□□□□ -0.5
NPHP1-207ENST00000445609 SUCLG2Q96I99 432 aa11.91□□□□□ -0.5
NPHP1-207ENST00000445609 KDM2BQ8NHM5 1336 aa11.9□□□□□ -0.5
NPHP1-207ENST00000445609 ATP8B2P98198 1209 aa11.9□□□□□ -0.5
NPHP1-207ENST00000445609 TRMT112Q9UI30 125 aaKnown RBP11.9□□□□□ -0.5
NPHP1-207ENST00000445609 HMMRO75330 724 aa11.9□□□□□ -0.5
NPHP1-207ENST00000445609 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.5
NPHP1-207ENST00000445609 SUSD4Q5VX71 490 aa11.9□□□□□ -0.5
NPHP1-207ENST00000445609 PPP1R42Q7Z4L9 355 aa11.9□□□□□ -0.5
NPHP1-207ENST00000445609 FAM89AQ96GI7 184 aa11.9□□□□□ -0.5
NPHP1-207ENST00000445609 KAZALD1Q96I82 304 aa11.9□□□□□ -0.5
NPHP1-207ENST00000445609 STK32BQ9NY57 414 aa11.9□□□□□ -0.5
NPHP1-207ENST00000445609 SLC15A2Q16348 729 aa11.89□□□□□ -0.51
NPHP1-207ENST00000445609 TBC1D9BQ66K14 1250 aa11.89□□□□□ -0.51
NPHP1-207ENST00000445609 UTP14AQ9BVJ6 771 aaKnown RBP11.89□□□□□ -0.51
NPHP1-207ENST00000445609 BICDL1Q6ZP65 573 aa11.89□□□□□ -0.51
NPHP1-207ENST00000445609 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
NPHP1-207ENST00000445609 SETDB2Q96T68 719 aa11.89□□□□□ -0.51
NPHP1-207ENST00000445609 BICC1Q9H694 974 aaKnown RBP11.89□□□□□ -0.51
NPHP1-207ENST00000445609 PNMA6EA0A0J9YXQ4 647 aa11.88□□□□□ -0.51
NPHP1-207ENST00000445609 MSH5O43196 834 aa11.88□□□□□ -0.51
NPHP1-207ENST00000445609 GYS1P13807 737 aa11.88□□□□□ -0.51
NPHP1-207ENST00000445609 MTX1Q13505 466 aa11.88□□□□□ -0.51
NPHP1-207ENST00000445609 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
NPHP1-207ENST00000445609 SRGAP3O43295 1099 aa11.88□□□□□ -0.51
NPHP1-207ENST00000445609 EPHA10Q5JZY3 1008 aa11.88□□□□□ -0.51
NPHP1-207ENST00000445609 UPF1Q92900 1129 aaKnown RBP eCLIP11.88□□□□□ -0.51
NPHP1-207ENST00000445609 CDHR2Q9BYE9 1310 aa11.88□□□□□ -0.51
NPHP1-207ENST00000445609 UBR3Q6ZT12 1888 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 FAM177BA6PVY3 158 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 SSH3Q8TE77 659 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 NUP98P52948 1817 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 PNPLA7Q6ZV29 1317 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 SH3TC1Q8TE82 1336 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 NTSR2O95665 410 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 FOXO4P98177 505 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 RABL6Q3YEC7 729 aaPredicted RBP11.87□□□□□ -0.51
NPHP1-207ENST00000445609 SYNE4Q8N205 404 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 GCC1Q96CN9 775 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 PLA2G12BQ9BX93 195 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 SCN7AQ01118 1682 aa11.87□□□□□ -0.51
NPHP1-207ENST00000445609 BCORQ6W2J9 1755 aa11.86□□□□□ -0.51
NPHP1-207ENST00000445609 IRS4O14654 1257 aaPredicted RBP11.86□□□□□ -0.51
NPHP1-207ENST00000445609 POLA2Q14181 598 aa11.86□□□□□ -0.51
NPHP1-207ENST00000445609 NFIXQ14938 502 aa11.86□□□□□ -0.51
NPHP1-207ENST00000445609 SMC5Q8IY18 1101 aa11.86□□□□□ -0.51
NPHP1-207ENST00000445609 NYXQ9GZU5 481 aa11.86□□□□□ -0.51
NPHP1-207ENST00000445609 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
NPHP1-207ENST00000445609 AFDNP55196 1824 aaKnown RBP11.86□□□□□ -0.51
NPHP1-207ENST00000445609 HSP90B1P14625 803 aaKnown RBP11.86□□□□□ -0.51
NPHP1-207ENST00000445609 LMBR1LQ6UX01 489 aa11.86□□□□□ -0.51
NPHP1-207ENST00000445609 NLGN1Q8N2Q7 840 aa11.86□□□□□ -0.51
NPHP1-207ENST00000445609 TPTE2Q6XPS3 522 aa11.85□□□□□ -0.51
NPHP1-207ENST00000445609 NBPF5PQ86XG9 351 aaPredicted RBP11.85□□□□□ -0.51
NPHP1-207ENST00000445609 ANKRD36CQ5JPF3 1778 aa11.85□□□□□ -0.51
NPHP1-207ENST00000445609 C4AP0C0L4 1744 aa11.85□□□□□ -0.51
NPHP1-207ENST00000445609 GTF2E1P29083 439 aaPredicted RBP11.85□□□□□ -0.51
NPHP1-207ENST00000445609 TM4SF1P30408 202 aa11.85□□□□□ -0.51
NPHP1-207ENST00000445609 NUTM1Q86Y26 1132 aa11.85□□□□□ -0.51
NPHP1-207ENST00000445609 CARMIL3Q8ND23 1372 aa11.84□□□□□ -0.51
NPHP1-207ENST00000445609 PDE8AO60658 829 aa11.84□□□□□ -0.51
NPHP1-207ENST00000445609 CSF1RP07333 972 aa11.84□□□□□ -0.51
NPHP1-207ENST00000445609 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
NPHP1-207ENST00000445609 HCLS1P14317 486 aaPredicted RBP11.83□□□□□ -0.52
NPHP1-207ENST00000445609 CTSWP56202 376 aa11.83□□□□□ -0.52
NPHP1-207ENST00000445609 ERFEQ4G0M1 354 aa11.83□□□□□ -0.52
NPHP1-207ENST00000445609 NPHP1O15259 732 aa11.83□□□□□ -0.52
NPHP1-207ENST00000445609 SURF6O75683 361 aaKnown RBP11.83□□□□□ -0.52
NPHP1-207ENST00000445609 SLC10A5Q5PT55 438 aa11.83□□□□□ -0.52
NPHP1-207ENST00000445609 TTLL11Q8NHH1 800 aa11.83□□□□□ -0.52
NPHP1-207ENST00000445609 EXOC6BQ9Y2D4 811 aa11.82□□□□□ -0.52
NPHP1-207ENST00000445609 NOP58Q9Y2X3 529 aaKnown RBP11.82□□□□□ -0.52
NPHP1-207ENST00000445609 SERPINB2P05120 415 aa11.82□□□□□ -0.52
NPHP1-207ENST00000445609 RFX5P48382 616 aaPredicted RBP11.82□□□□□ -0.52
NPHP1-207ENST00000445609 NUCB1Q02818 461 aa11.82□□□□□ -0.52
NPHP1-207ENST00000445609 HSP90AB4PQ58FF6 505 aa11.82□□□□□ -0.52
NPHP1-207ENST00000445609 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
NPHP1-207ENST00000445609 CNBD1Q8NA66 436 aa11.82□□□□□ -0.52
NPHP1-207ENST00000445609 PDZRN3Q9UPQ7 1066 aa11.82□□□□□ -0.52
NPHP1-207ENST00000445609 CCDC57Q2TAC2 916 aa11.81□□□□□ -0.52
NPHP1-207ENST00000445609 COPRSQ9NQ92 184 aa11.81□□□□□ -0.52
NPHP1-207ENST00000445609 POLRMTO00411 1230 aaKnown RBP11.81□□□□□ -0.52
NPHP1-207ENST00000445609 RAB11FIP3O75154 756 aa11.81□□□□□ -0.52
NPHP1-207ENST00000445609 DDR1Q08345 913 aa11.81□□□□□ -0.52
NPHP1-207ENST00000445609 IFIT5Q13325 482 aaKnown RBP11.81□□□□□ -0.52
NPHP1-207ENST00000445609 CCDC85AQ96PX6 553 aaPredicted RBP11.81□□□□□ -0.52
NPHP1-207ENST00000445609 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
NPHP1-207ENST00000445609 PA2G4Q9UQ80 394 aaKnown RBP11.81□□□□□ -0.52
NPHP1-207ENST00000445609 APBB1O00213 710 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms