RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SMC5Q8IY18 1101 aa21.43■■□□□ 1.02
SHANK3-203ENST00000445220 GOLGA1Q92805 767 aa21.43■■□□□ 1.02
SHANK3-203ENST00000445220 JADE2Q9NQC1 790 aa21.43■■□□□ 1.02
SHANK3-203ENST00000445220 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.43■■□□□ 1.02
SHANK3-203ENST00000445220 OPA1O60313 960 aa21.42■■□□□ 1.02
SHANK3-203ENST00000445220 ZC3H6P61129 1189 aaKnown RBP21.42■■□□□ 1.02
SHANK3-203ENST00000445220 TDRD12Q587J7 1177 aaKnown RBP21.42■■□□□ 1.02
SHANK3-203ENST00000445220 TSG101Q99816 390 aa21.42■■□□□ 1.02
SHANK3-203ENST00000445220 PHF8Q9UPP1 1060 aa21.42■■□□□ 1.02
SHANK3-203ENST00000445220 EMILIN1Q9Y6C2 1016 aa21.42■■□□□ 1.02
SHANK3-203ENST00000445220 HDAC1Q13547 482 aaPredicted RBP21.42■■□□□ 1.02
SHANK3-203ENST00000445220 PPP1R12BO60237 982 aaPredicted RBP21.42■■□□□ 1.02
SHANK3-203ENST00000445220 ZSCAN16Q9H4T2 348 aaPredicted RBP21.42■■□□□ 1.02
SHANK3-203ENST00000445220 AKAP2Q9Y2D5 859 aa21.42■■□□□ 1.02
SHANK3-203ENST00000445220 NUP160Q12769 1436 aa21.42■■□□□ 1.02
SHANK3-203ENST00000445220 NBPF11Q86T75 865 aa21.42■■□□□ 1.02
SHANK3-203ENST00000445220 UBASH3AP57075 661 aa21.41■■□□□ 1.02
SHANK3-203ENST00000445220 CCDC196A0A1B0GTZ2 297 aa21.41■■□□□ 1.02
SHANK3-203ENST00000445220 A0A1B0GUL7 405 aa21.41■■□□□ 1.02
SHANK3-203ENST00000445220 GABPB1Q06547 395 aaPredicted RBP21.41■■□□□ 1.02
SHANK3-203ENST00000445220 WDR62O43379 1518 aa21.41■■□□□ 1.02
SHANK3-203ENST00000445220 UGGT2Q9NYU1 1516 aa21.41■■□□□ 1.02
SHANK3-203ENST00000445220 UBE4AQ14139 1066 aa21.41■■□□□ 1.02
SHANK3-203ENST00000445220 LARP6Q9BRS8 491 aaKnown RBP21.4■■□□□ 1.02
SHANK3-203ENST00000445220 AMOTL2Q9Y2J4 779 aa21.4■■□□□ 1.02
SHANK3-203ENST00000445220 CNPY2Q9Y2B0 182 aa21.4■■□□□ 1.02
SHANK3-203ENST00000445220 ATP2C2O75185 946 aa21.4■■□□□ 1.02
SHANK3-203ENST00000445220 OTUD6BQ8N6M0 293 aa21.4■■□□□ 1.02
SHANK3-203ENST00000445220 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
SHANK3-203ENST00000445220 DISP3Q9P2K9 1392 aa21.4■■□□□ 1.02
SHANK3-203ENST00000445220 NUCB1Q02818 461 aa21.4■■□□□ 1.02
SHANK3-203ENST00000445220 PLCD3Q8N3E9 789 aa21.4■■□□□ 1.02
SHANK3-203ENST00000445220 MIS18AQ9NYP9 233 aa21.4■■□□□ 1.02
SHANK3-203ENST00000445220 RALGAPBQ86X10 1494 aa21.39■■□□□ 1.02
SHANK3-203ENST00000445220 LMTK3Q96Q04 1460 aa21.39■■□□□ 1.02
SHANK3-203ENST00000445220 ATRIPQ8WXE1 791 aa21.39■■□□□ 1.02
SHANK3-203ENST00000445220 CCDC102BQ68D86 513 aa21.39■■□□□ 1.01
SHANK3-203ENST00000445220 IGHMBP2P38935 993 aaKnown RBP21.39■■□□□ 1.01
SHANK3-203ENST00000445220 TMEM132AQ24JP5 1023 aa21.39■■□□□ 1.01
SHANK3-203ENST00000445220 C6orf163Q5TEZ5 329 aa21.39■■□□□ 1.01
SHANK3-203ENST00000445220 SPATA24Q86W54 205 aa21.39■■□□□ 1.01
SHANK3-203ENST00000445220 VPS18Q9P253 973 aa21.39■■□□□ 1.01
SHANK3-203ENST00000445220 MSL1Q68DK7 614 aa21.39■■□□□ 1.01
SHANK3-203ENST00000445220 SSR1P43307 286 aaKnown RBP21.38■■□□□ 1.01
SHANK3-203ENST00000445220 KANK3Q6NY19 840 aa21.38■■□□□ 1.01
SHANK3-203ENST00000445220 BOLA2Q9H3K6 86 aa21.38■■□□□ 1.01
SHANK3-203ENST00000445220 KDM5BQ9UGL1 1544 aa21.38■■□□□ 1.01
SHANK3-203ENST00000445220 MATR3P43243 847 aaKnown RBP eCLIP21.38■■□□□ 1.013e-7■■■□□ 18
SHANK3-203ENST00000445220 CEP57Q86XR8 500 aa21.38■■□□□ 1.01
SHANK3-203ENST00000445220 CEP63Q96MT8 703 aa21.38■■□□□ 1.01
SHANK3-203ENST00000445220 RAPGEF6Q8TEU7 1601 aa21.38■■□□□ 1.01
SHANK3-203ENST00000445220 TUBBP07437 444 aa21.38■■□□□ 1.01
SHANK3-203ENST00000445220 GBP6Q6ZN66 633 aa21.37■■□□□ 1.01
SHANK3-203ENST00000445220 NSRP1Q9H0G5 558 aaKnown RBP21.37■■□□□ 1.01
SHANK3-203ENST00000445220 DBF4Q9UBU7 674 aaPredicted RBP21.37■■□□□ 1.01
SHANK3-203ENST00000445220 HYPKQ9NX55 129 aa21.37■■□□□ 1.01
SHANK3-203ENST00000445220 STAMBPO95630 424 aa21.37■■□□□ 1.01
SHANK3-203ENST00000445220 FBXO31Q5XUX0 539 aaPredicted RBP21.37■■□□□ 1.01
SHANK3-203ENST00000445220 CCDC121Q6ZUS5 278 aa21.37■■□□□ 1.01
SHANK3-203ENST00000445220 FBF1Q8TES7 1133 aa21.37■■□□□ 1.01
SHANK3-203ENST00000445220 RNF216Q9NWF9 866 aaPredicted RBP21.37■■□□□ 1.01
SHANK3-203ENST00000445220 PTGS1P23219 599 aa21.36■■□□□ 1.01
SHANK3-203ENST00000445220 MTIF2P46199 727 aaKnown RBP21.36■■□□□ 1.01
SHANK3-203ENST00000445220 POTEJP0CG39 1038 aa21.36■■□□□ 1.01
SHANK3-203ENST00000445220 AIDAQ96BJ3 306 aa21.36■■□□□ 1.01
SHANK3-203ENST00000445220 DUOX2Q9NRD8 1548 aa21.36■■□□□ 1.01
SHANK3-203ENST00000445220 ANAPC15P60006 121 aa21.36■■□□□ 1.01
SHANK3-203ENST00000445220 KIF21AQ7Z4S6 1674 aa21.36■■□□□ 1.01
SHANK3-203ENST00000445220 ERO1AQ96HE7 468 aa21.36■■□□□ 1.01
SHANK3-203ENST00000445220 DACT1Q9NYF0 836 aa21.36■■□□□ 1.01
SHANK3-203ENST00000445220 DNAJC25Q9H1X3 360 aa21.35■■□□□ 1.01
SHANK3-203ENST00000445220 ITSN2Q9NZM3 1697 aa21.35■■□□□ 1.01
SHANK3-203ENST00000445220 TMCO5BA8MYB1 307 aa21.35■■□□□ 1.01
SHANK3-203ENST00000445220 SYT1P21579 422 aa21.35■■□□□ 1.01
SHANK3-203ENST00000445220 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.35■■□□□ 1.01
SHANK3-203ENST00000445220 EVI5LQ96CN4 794 aa21.35■■□□□ 1.01
SHANK3-203ENST00000445220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.35■■□□□ 1.01
SHANK3-203ENST00000445220 TYRO3Q06418 890 aa21.34■■□□□ 1.01
SHANK3-203ENST00000445220 MYRIPQ8NFW9 859 aa21.34■■□□□ 1.01
SHANK3-203ENST00000445220 PLCH2O75038 1416 aa21.34■■□□□ 1.01
SHANK3-203ENST00000445220 N4BP3O15049 544 aa21.34■■□□□ 1.01
SHANK3-203ENST00000445220 CCT2P78371 535 aaKnown RBP21.34■■□□□ 1.01
SHANK3-203ENST00000445220 GOLGA8BA8MQT2 603 aa21.34■■□□□ 1.01
SHANK3-203ENST00000445220 CTAGE9A4FU28 777 aa21.34■■□□□ 1.01
SHANK3-203ENST00000445220 LRP2BPQ9P2M1 347 aa21.34■■□□□ 1.01
SHANK3-203ENST00000445220 ZNF652Q9Y2D9 606 aa21.34■■□□□ 1.01
SHANK3-203ENST00000445220 CCDC6Q16204 474 aa21.33■■□□□ 1.01
SHANK3-203ENST00000445220 METTL24Q5JXM2 366 aa21.33■■□□□ 1.01
SHANK3-203ENST00000445220 TMOD3Q9NYL9 352 aa21.33■■□□□ 1.01
SHANK3-203ENST00000445220 IDH1O75874 414 aaKnown RBP21.33■■□□□ 1.01
SHANK3-203ENST00000445220 ISM2Q6H9L7 571 aa21.33■■□□□ 1.01
SHANK3-203ENST00000445220 KRBA2Q6ZNG9 492 aa21.33■■□□□ 1.01
SHANK3-203ENST00000445220 FAM114A1Q8IWE2 563 aa21.33■■□□□ 1.01
SHANK3-203ENST00000445220 F13A1P00488 732 aa21.33■■□□□ 1
SHANK3-203ENST00000445220 DESP17661 470 aa21.33■■□□□ 1
SHANK3-203ENST00000445220 CTAGE1Q96RT6 745 aa21.33■■□□□ 1
SHANK3-203ENST00000445220 FLIIQ13045 1269 aa21.33■■□□□ 1
SHANK3-203ENST00000445220 CADPS2Q86UW7 1296 aa21.33■■□□□ 1
SHANK3-203ENST00000445220 HOOK3Q86VS8 718 aa21.33■■□□□ 1
SHANK3-203ENST00000445220 AOPEPQ8N6M6 819 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms