RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 MASTLQ96GX5 879 aa12.25□□□□□ -0.45
LINC00642-203ENST00000444942 PHACTR3Q96KR7 559 aa12.25□□□□□ -0.45
LINC00642-203ENST00000444942 SCN7AQ01118 1682 aa12.25□□□□□ -0.45
LINC00642-203ENST00000444942 IARSP41252 1262 aaKnown RBP12.24□□□□□ -0.45
LINC00642-203ENST00000444942 LGR6Q9HBX8 967 aa12.24□□□□□ -0.45
LINC00642-203ENST00000444942 GJA3Q9Y6H8 435 aa12.24□□□□□ -0.45
LINC00642-203ENST00000444942 FAM155AB1AL88 458 aaPredicted RBP12.23□□□□□ -0.45
LINC00642-203ENST00000444942 MNX1P50219 401 aaPredicted RBP12.23□□□□□ -0.45
LINC00642-203ENST00000444942 DNAJC10Q8IXB1 793 aa12.23□□□□□ -0.45
LINC00642-203ENST00000444942 PAPPA2Q9BXP8 1791 aa12.23□□□□□ -0.45
LINC00642-203ENST00000444942 KIAA0100Q14667 2235 aaKnown RBP12.23□□□□□ -0.45
LINC00642-203ENST00000444942 COL4A5P29400 1685 aa12.23□□□□□ -0.45
LINC00642-203ENST00000444942 CYP19A1P11511 503 aaPredicted RBP12.22□□□□□ -0.45
LINC00642-203ENST00000444942 KIF23Q02241 960 aaPredicted RBP12.22□□□□□ -0.45
LINC00642-203ENST00000444942 TBC1D9BQ66K14 1250 aa12.22□□□□□ -0.45
LINC00642-203ENST00000444942 GLIS2Q9BZE0 524 aaPredicted RBP12.22□□□□□ -0.45
LINC00642-203ENST00000444942 RNMTO43148 476 aaKnown RBP12.21□□□□□ -0.45
LINC00642-203ENST00000444942 EIF6P56537 245 aaKnown RBP12.21□□□□□ -0.45
LINC00642-203ENST00000444942 HUNKP57058 714 aa12.21□□□□□ -0.45
LINC00642-203ENST00000444942 CCDC184Q52MB2 194 aa12.21□□□□□ -0.45
LINC00642-203ENST00000444942 CCDC146Q8IYE0 955 aa12.21□□□□□ -0.45
LINC00642-203ENST00000444942 RTKN2Q8IZC4 609 aa12.21□□□□□ -0.45
LINC00642-203ENST00000444942 SYNE4Q8N205 404 aa12.21□□□□□ -0.45
LINC00642-203ENST00000444942 JDP2Q8WYK2 163 aa12.21□□□□□ -0.45
LINC00642-203ENST00000444942 ZNF408Q9H9D4 720 aa12.21□□□□□ -0.45
LINC00642-203ENST00000444942 ZBTB1Q9Y2K1 713 aa12.21□□□□□ -0.45
LINC00642-203ENST00000444942 NEFMP07197 916 aa12.2□□□□□ -0.46
LINC00642-203ENST00000444942 WDR43Q15061 677 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00642-203ENST00000444942 OLFM4Q6UX06 510 aa12.2□□□□□ -0.46
LINC00642-203ENST00000444942 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
LINC00642-203ENST00000444942 GAS2L2Q8NHY3 880 aa12.2□□□□□ -0.46
LINC00642-203ENST00000444942 GNAT3A8MTJ3 354 aa12.19□□□□□ -0.46
LINC00642-203ENST00000444942 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
LINC00642-203ENST00000444942 RGMBQ6NW40 437 aa12.19□□□□□ -0.46
LINC00642-203ENST00000444942 FBXO46Q6PJ61 603 aaPredicted RBP12.19□□□□□ -0.46
LINC00642-203ENST00000444942 ADARB2Q9NS39 739 aaKnown RBP12.19□□□□□ -0.46
LINC00642-203ENST00000444942 PGAP2Q9UHJ9 254 aa12.19□□□□□ -0.46
LINC00642-203ENST00000444942 HDAC9Q9UKV0 1011 aa12.19□□□□□ -0.46
LINC00642-203ENST00000444942 MAPK8IP3Q9UPT6 1336 aa12.19□□□□□ -0.46
LINC00642-203ENST00000444942 RANBP2P49792 3224 aaKnown RBP12.19□□□□□ -0.46
LINC00642-203ENST00000444942 CNBD1Q8NA66 436 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 CCDC102AQ96A19 550 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 POLR2AP24928 1970 aaKnown RBP12.18□□□□□ -0.46
LINC00642-203ENST00000444942 SNED1Q8TER0 1413 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 SIPA1L3O60292 1781 aaPredicted RBP12.18□□□□□ -0.46
LINC00642-203ENST00000444942 ST5P78524 1137 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 MCM10Q7L590 875 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 IL17REQ8NFR9 667 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 CSRNP1Q96S65 589 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 PLEKHF1Q96S99 279 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 ADAMTS8Q9UP79 889 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 GTF3C3Q9Y5Q9 886 aa12.18□□□□□ -0.46
LINC00642-203ENST00000444942 HTTP42858 3142 aa12.17□□□□□ -0.46
LINC00642-203ENST00000444942 NPR1P16066 1061 aa12.17□□□□□ -0.46
LINC00642-203ENST00000444942 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
LINC00642-203ENST00000444942 RTF1Q92541 710 aaKnown RBP12.17□□□□□ -0.46
LINC00642-203ENST00000444942 PSMD1Q99460 953 aa12.17□□□□□ -0.46
LINC00642-203ENST00000444942 SLC52A2Q9HAB3 445 aa12.17□□□□□ -0.46
LINC00642-203ENST00000444942 GPRC5DQ9NZD1 345 aa12.17□□□□□ -0.46
LINC00642-203ENST00000444942 RRP7AQ9Y3A4 280 aaKnown RBP12.17□□□□□ -0.46
LINC00642-203ENST00000444942 BRCA2P51587 3418 aa12.16□□□□□ -0.46
LINC00642-203ENST00000444942 CENPFP49454 3210 aa12.16□□□□□ -0.46
LINC00642-203ENST00000444942 POTEFA5A3E0 1075 aa12.16□□□□□ -0.46
LINC00642-203ENST00000444942 TEFQ10587 303 aa12.16□□□□□ -0.46
LINC00642-203ENST00000444942 CDC37L1Q7L3B6 337 aa12.16□□□□□ -0.46
LINC00642-203ENST00000444942 ZC3H15Q8WU90 426 aaKnown RBP12.16□□□□□ -0.46
LINC00642-203ENST00000444942 ZNF296Q8WUU4 475 aaPredicted RBP12.16□□□□□ -0.46
LINC00642-203ENST00000444942 OTUD5Q96G74 571 aa12.16□□□□□ -0.46
LINC00642-203ENST00000444942 PNNQ9H307 717 aaKnown RBP12.16□□□□□ -0.46
LINC00642-203ENST00000444942 MRS2Q9HD23 443 aa12.16□□□□□ -0.46
LINC00642-203ENST00000444942 A0A087WZG4 1122 aa12.15□□□□□ -0.46
LINC00642-203ENST00000444942 NPHP1O15259 732 aa12.15□□□□□ -0.46
LINC00642-203ENST00000444942 EIF5P55010 431 aaKnown RBP12.15□□□□□ -0.46
LINC00642-203ENST00000444942 THUMPD2Q9BTF0 503 aaKnown RBP12.15□□□□□ -0.46
LINC00642-203ENST00000444942 MRC1P22897 1456 aa12.14□□□□□ -0.47
LINC00642-203ENST00000444942 SLC10A3P09131 477 aa12.14□□□□□ -0.47
LINC00642-203ENST00000444942 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
LINC00642-203ENST00000444942 ZNF157P51786 506 aaPredicted RBP12.14□□□□□ -0.47
LINC00642-203ENST00000444942 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
LINC00642-203ENST00000444942 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
LINC00642-203ENST00000444942 SETDB2Q96T68 719 aa12.14□□□□□ -0.47
LINC00642-203ENST00000444942 UBR2Q8IWV8 1755 aa12.14□□□□□ -0.47
LINC00642-203ENST00000444942 UNC80Q8N2C7 3258 aa12.13□□□□□ -0.47
LINC00642-203ENST00000444942 KLRG2A4D1S0 409 aaPredicted RBP12.13□□□□□ -0.47
LINC00642-203ENST00000444942 RIPK4P57078 832 aa12.13□□□□□ -0.47
LINC00642-203ENST00000444942 MIS18AQ9NYP9 233 aa12.13□□□□□ -0.47
LINC00642-203ENST00000444942 BTBD11A6QL63 1104 aa12.12□□□□□ -0.47
LINC00642-203ENST00000444942 KCNQ3O43525 872 aa12.12□□□□□ -0.47
LINC00642-203ENST00000444942 TMPOP42166 694 aaKnown RBP12.12□□□□□ -0.47
LINC00642-203ENST00000444942 INTS3Q68E01 1043 aaKnown RBP12.12□□□□□ -0.47
LINC00642-203ENST00000444942 TTC5Q8N0Z6 440 aa12.12□□□□□ -0.47
LINC00642-203ENST00000444942 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
LINC00642-203ENST00000444942 GBA2Q9HCG7 927 aaPredicted RBP12.12□□□□□ -0.47
LINC00642-203ENST00000444942 HIRAP54198 1017 aaPredicted RBP12.11□□□□□ -0.47
LINC00642-203ENST00000444942 NOM1Q5C9Z4 860 aaKnown RBP12.11□□□□□ -0.47
LINC00642-203ENST00000444942 USP48Q86UV5 1035 aa12.11□□□□□ -0.47
LINC00642-203ENST00000444942 LARGE2Q8N3Y3 721 aa12.11□□□□□ -0.47
LINC00642-203ENST00000444942 FAM9BQ8IZU0 186 aa12.1□□□□□ -0.47
LINC00642-203ENST00000444942 VSIG10Q8N0Z9 540 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms