RNA–Protein interactions for RNA: ENST00000444906.1

SLC4A3-208, Transcript of solute carrier family 4 member 3, humanhuman

TSL 5

Gene SLC4A3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-208ENST00000444906 ZNF219Q9P2Y4 722 aaPredicted RBP22.32■■□□□ 1.16
SLC4A3-208ENST00000444906 LAMB2P55268 1798 aa22.32■■□□□ 1.16
SLC4A3-208ENST00000444906 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
SLC4A3-208ENST00000444906 LTBP3Q9NS15 1303 aa22.31■■□□□ 1.16
SLC4A3-208ENST00000444906 ELL2O00472 640 aaPredicted RBP22.31■■□□□ 1.16
SLC4A3-208ENST00000444906 TCIRG1Q13488 830 aa22.31■■□□□ 1.16
SLC4A3-208ENST00000444906 C7orf43Q8WVR3 580 aa22.31■■□□□ 1.16
SLC4A3-208ENST00000444906 NLRP10Q86W26 655 aa22.3■■□□□ 1.16
SLC4A3-208ENST00000444906 TSR2Q969E8 191 aaKnown RBP22.3■■□□□ 1.16
SLC4A3-208ENST00000444906 UTP14AQ9BVJ6 771 aaKnown RBP22.3■■□□□ 1.16
SLC4A3-208ENST00000444906 ALDH1B1P30837 517 aa22.29■■□□□ 1.16
SLC4A3-208ENST00000444906 ANKRD13DQ6ZTN6 518 aa22.29■■□□□ 1.16
SLC4A3-208ENST00000444906 CHMP4AQ9BY43 222 aa22.29■■□□□ 1.16
SLC4A3-208ENST00000444906 KIF3CO14782 793 aa22.28■■□□□ 1.16
SLC4A3-208ENST00000444906 SLC10A5Q5PT55 438 aa22.28■■□□□ 1.16
SLC4A3-208ENST00000444906 FAM9BQ8IZU0 186 aa22.28■■□□□ 1.16
SLC4A3-208ENST00000444906 TSPYL6Q8N831 410 aa22.28■■□□□ 1.16
SLC4A3-208ENST00000444906 TAOK3Q9H2K8 898 aa22.28■■□□□ 1.16
SLC4A3-208ENST00000444906 HOXA10P31260 410 aaPredicted RBP22.27■■□□□ 1.16
SLC4A3-208ENST00000444906 CCDC93Q567U6 631 aa22.27■■□□□ 1.16
SLC4A3-208ENST00000444906 CCDC30Q5VVM6 783 aa22.27■■□□□ 1.16
SLC4A3-208ENST00000444906 WDR63Q8IWG1 891 aa22.27■■□□□ 1.16
SLC4A3-208ENST00000444906 DDX60Q8IY21 1712 aaKnown RBP22.27■■□□□ 1.16
SLC4A3-208ENST00000444906 RPGRQ92834 1020 aaKnown RBP22.26■■□□□ 1.15
SLC4A3-208ENST00000444906 ISCA1Q9BUE6 129 aa22.26■■□□□ 1.15
SLC4A3-208ENST00000444906 KDM2BQ8NHM5 1336 aa22.26■■□□□ 1.15
SLC4A3-208ENST00000444906 C3orf67Q6ZVT6 689 aa22.25■■□□□ 1.15
SLC4A3-208ENST00000444906 NLRP3Q96P20 1036 aa22.25■■□□□ 1.15
SLC4A3-208ENST00000444906 PHAXQ9H814 394 aaKnown RBP22.25■■□□□ 1.15
SLC4A3-208ENST00000444906 SALL2Q9Y467 1007 aaPredicted RBP22.25■■□□□ 1.15
SLC4A3-208ENST00000444906 SNED1Q8TER0 1413 aa22.24■■□□□ 1.15
SLC4A3-208ENST00000444906 GOLGA2Q08379 1002 aa22.24■■□□□ 1.15
SLC4A3-208ENST00000444906 CRAMP1Q96RY5 1269 aa22.24■■□□□ 1.15
SLC4A3-208ENST00000444906 NMRK2Q9NPI5 230 aa22.24■■□□□ 1.15
SLC4A3-208ENST00000444906 TRMT112Q9UI30 125 aaKnown RBP22.24■■□□□ 1.15
SLC4A3-208ENST00000444906 CACNA1FO60840 1977 aa22.24■■□□□ 1.15
SLC4A3-208ENST00000444906 SH3TC1Q8TE82 1336 aa22.24■■□□□ 1.15
SLC4A3-208ENST00000444906 FANCIQ9NVI1 1328 aa22.24■■□□□ 1.15
SLC4A3-208ENST00000444906 TWISTNBQ3B726 338 aaPredicted RBP22.23■■□□□ 1.15
SLC4A3-208ENST00000444906 RBM17Q96I25 401 aaKnown RBP22.23■■□□□ 1.15
SLC4A3-208ENST00000444906 TRIM28Q13263 835 aaKnown RBP22.22■■□□□ 1.15
SLC4A3-208ENST00000444906 RIC3Q7Z5B4 369 aa22.22■■□□□ 1.15
SLC4A3-208ENST00000444906 ATP5J2-PTCD1G3V325 749 aa22.21■■□□□ 1.15
SLC4A3-208ENST00000444906 FKBP4Q02790 459 aaKnown RBP eCLIP22.21■■□□□ 1.15
SLC4A3-208ENST00000444906 OLFM4Q6UX06 510 aa22.21■■□□□ 1.15
SLC4A3-208ENST00000444906 RTKN2Q8IZC4 609 aa22.21■■□□□ 1.15
SLC4A3-208ENST00000444906 SYNE4Q8N205 404 aa22.21■■□□□ 1.15
SLC4A3-208ENST00000444906 GLTPD2A6NH11 291 aa22.2■■□□□ 1.14
SLC4A3-208ENST00000444906 HCLS1P14317 486 aaPredicted RBP22.2■■□□□ 1.14
SLC4A3-208ENST00000444906 CC2D2BQ6DHV5 1058 aa22.2■■□□□ 1.14
SLC4A3-208ENST00000444906 DDX58O95786 925 aaKnown RBP22.19■■□□□ 1.14
SLC4A3-208ENST00000444906 STK31Q9BXU1 1019 aa22.19■■□□□ 1.14
SLC4A3-208ENST00000444906 WDR90Q96KV7 1748 aa22.19■■□□□ 1.14
SLC4A3-208ENST00000444906 PPEF1O14829 653 aaPredicted RBP22.18■■□□□ 1.14
SLC4A3-208ENST00000444906 TAF1P21675 1872 aa22.17■■□□□ 1.14
SLC4A3-208ENST00000444906 ABCC4O15439 1325 aa22.17■■□□□ 1.14
SLC4A3-208ENST00000444906 TOMM70O94826 608 aa22.17■■□□□ 1.14
SLC4A3-208ENST00000444906 ZNF428Q96B54 188 aa22.17■■□□□ 1.14
SLC4A3-208ENST00000444906 GRIPAP1Q4V328 841 aa22.16■■□□□ 1.14
SLC4A3-208ENST00000444906 FAM89AQ96GI7 184 aa22.16■■□□□ 1.14
SLC4A3-208ENST00000444906 PSMD1Q99460 953 aa22.16■■□□□ 1.14
SLC4A3-208ENST00000444906 MYD88Q99836 296 aa22.16■■□□□ 1.14
SLC4A3-208ENST00000444906 METTL22Q9BUU2 404 aaPredicted RBP22.16■■□□□ 1.14
SLC4A3-208ENST00000444906 RRAGCQ9HB90 399 aa22.16■■□□□ 1.14
SLC4A3-208ENST00000444906 SPINK5Q9NQ38 1064 aaPredicted RBP22.16■■□□□ 1.14
SLC4A3-208ENST00000444906 ZNF277Q9NRM2 450 aaPredicted RBP22.16■■□□□ 1.14
SLC4A3-208ENST00000444906 ZNF521Q96K83 1311 aa22.15■■□□□ 1.14
SLC4A3-208ENST00000444906 TCERG1O14776 1098 aaKnown RBP22.15■■□□□ 1.14
SLC4A3-208ENST00000444906 CCDC191Q8NCU4 936 aa22.15■■□□□ 1.14
SLC4A3-208ENST00000444906 LRRC37AA6NMS7 1700 aa22.14■■□□□ 1.14
SLC4A3-208ENST00000444906 VAMP4O75379 141 aa22.14■■□□□ 1.13
SLC4A3-208ENST00000444906 EXOSC9Q06265 439 aaKnown RBP22.14■■□□□ 1.13
SLC4A3-208ENST00000444906 DPY19L2Q6NUT2 758 aa22.14■■□□□ 1.13
SLC4A3-208ENST00000444906 KSR2Q6VAB6 950 aa22.14■■□□□ 1.13
SLC4A3-208ENST00000444906 MYH16Q9H6N6 1097 aa22.14■■□□□ 1.13
SLC4A3-208ENST00000444906 SLC4A2P04920 1241 aa22.13■■□□□ 1.13
SLC4A3-208ENST00000444906 IARSP41252 1262 aaKnown RBP22.13■■□□□ 1.13
SLC4A3-208ENST00000444906 DDX46Q7L014 1031 aaKnown RBP22.13■■□□□ 1.13
SLC4A3-208ENST00000444906 G2E3Q7L622 706 aa22.13■■□□□ 1.13
SLC4A3-208ENST00000444906 SLC51AQ86UW1 340 aa22.13■■□□□ 1.13
SLC4A3-208ENST00000444906 ZBTB38Q8NAP3 1195 aaPredicted RBP22.13■■□□□ 1.13
SLC4A3-208ENST00000444906 MAP3K2Q9Y2U5 619 aa22.13■■□□□ 1.13
SLC4A3-208ENST00000444906 ATP6V0A2Q9Y487 856 aa22.13■■□□□ 1.13
SLC4A3-208ENST00000444906 PI4KAP2A4QPH2 592 aa22.12■■□□□ 1.13
SLC4A3-208ENST00000444906 IRS4O14654 1257 aaPredicted RBP22.12■■□□□ 1.13
SLC4A3-208ENST00000444906 BBOX1O75936 387 aa22.12■■□□□ 1.13
SLC4A3-208ENST00000444906 GRAPQ13588 217 aa22.12■■□□□ 1.13
SLC4A3-208ENST00000444906 SF3B3Q15393 1217 aaKnown RBP22.12■■□□□ 1.13
SLC4A3-208ENST00000444906 C16orf71Q8IYS4 520 aaPredicted RBP22.12■■□□□ 1.13
SLC4A3-208ENST00000444906 PI4KAP1Q8N8J0 262 aa22.12■■□□□ 1.13
SLC4A3-208ENST00000444906 RBM46Q8TBY0 533 aaKnown RBP22.12■■□□□ 1.13
SLC4A3-208ENST00000444906 GRAPLQ8TC17 118 aaPredicted RBP22.12■■□□□ 1.13
SLC4A3-208ENST00000444906 CWC25Q9NXE8 425 aaPredicted RBP22.12■■□□□ 1.13
SLC4A3-208ENST00000444906 CCER2I3L3R5 266 aa22.11■■□□□ 1.13
SLC4A3-208ENST00000444906 VEGFAP15692 232 aaPredicted RBP22.11■■□□□ 1.13
SLC4A3-208ENST00000444906 RTL5Q5HYW3 569 aaPredicted RBP22.11■■□□□ 1.13
SLC4A3-208ENST00000444906 PCCAP05165 728 aaPredicted RBP22.1■■□□□ 1.13
SLC4A3-208ENST00000444906 TMX4Q9H1E5 349 aaPredicted RBP22.1■■□□□ 1.13
SLC4A3-208ENST00000444906 COL4A5P29400 1685 aa22.1■■□□□ 1.13
SLC4A3-208ENST00000444906 MYH3P11055 1940 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms