RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 RFX5P48382 616 aaPredicted RBP16.61■□□□□ 0.25
RBM39-216ENST00000444878 NEK4P51957 841 aa16.61■□□□□ 0.25
RBM39-216ENST00000444878 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
RBM39-216ENST00000444878 CWC27Q6UX04 472 aaKnown RBP16.61■□□□□ 0.25
RBM39-216ENST00000444878 DIAPH3Q9NSV4 1193 aa16.61■□□□□ 0.25
RBM39-216ENST00000444878 WNK3Q9BYP7 1800 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 CCDC191Q8NCU4 936 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 EVI5LQ96CN4 794 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 ATG3Q9NT62 314 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 PALD1Q9ULE6 856 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 PHLPP1O60346 1717 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 TJP1Q07157 1748 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 LTBP4Q8N2S1 1624 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 LMBR1LQ6UX01 489 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 DNAJC10Q8IXB1 793 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 RUFY2Q8WXA3 655 aa16.6■□□□□ 0.25
RBM39-216ENST00000444878 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
RBM39-216ENST00000444878 STARD3NLO95772 234 aa16.59■□□□□ 0.25
RBM39-216ENST00000444878 RAB3GAP1Q15042 981 aa16.59■□□□□ 0.25
RBM39-216ENST00000444878 TLR7Q9NYK1 1049 aaKnown RBP16.59■□□□□ 0.25
RBM39-216ENST00000444878 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
RBM39-216ENST00000444878 TNPO1Q92973 898 aaKnown RBP16.58■□□□□ 0.25
RBM39-216ENST00000444878 RAD50Q92878 1312 aa16.58■□□□□ 0.25
RBM39-216ENST00000444878 ADAMTS2O95450 1211 aa16.58■□□□□ 0.24
RBM39-216ENST00000444878 HSPA4P34932 840 aa16.58■□□□□ 0.24
RBM39-216ENST00000444878 MCM2P49736 904 aa16.58■□□□□ 0.24
RBM39-216ENST00000444878 FOXO4P98177 505 aa16.58■□□□□ 0.24
RBM39-216ENST00000444878 LRP6O75581 1613 aa16.58■□□□□ 0.24
RBM39-216ENST00000444878 BCL9O00512 1426 aa16.57■□□□□ 0.24
RBM39-216ENST00000444878 KIF6Q6ZMV9 814 aa16.57■□□□□ 0.24
RBM39-216ENST00000444878 SYTL4Q96C24 671 aaPredicted RBP16.57■□□□□ 0.24
RBM39-216ENST00000444878 IL17RAQ96F46 866 aa16.57■□□□□ 0.24
RBM39-216ENST00000444878 BOLA2Q9H3K6 86 aa16.57■□□□□ 0.24
RBM39-216ENST00000444878 DDX11L8A8MPP1 907 aa16.56■□□□□ 0.24
RBM39-216ENST00000444878 TFCP2Q12800 502 aa16.56■□□□□ 0.24
RBM39-216ENST00000444878 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
RBM39-216ENST00000444878 GBP4Q96PP9 640 aa16.56■□□□□ 0.24
RBM39-216ENST00000444878 LSG1Q9H089 658 aaKnown RBP16.56■□□□□ 0.24
RBM39-216ENST00000444878 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
RBM39-216ENST00000444878 HIP1O00291 1037 aa16.55■□□□□ 0.24
RBM39-216ENST00000444878 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
RBM39-216ENST00000444878 TCIRG1Q13488 830 aa16.55■□□□□ 0.24
RBM39-216ENST00000444878 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
RBM39-216ENST00000444878 ISCA1Q9BUE6 129 aa16.55■□□□□ 0.24
RBM39-216ENST00000444878 CDCA7Q9BWT1 371 aaPredicted RBP16.55■□□□□ 0.24
RBM39-216ENST00000444878 DBNLQ9UJU6 430 aaKnown RBP16.54■□□□□ 0.24
RBM39-216ENST00000444878 NRAPQ86VF7 1730 aa16.54■□□□□ 0.24
RBM39-216ENST00000444878 DOT1LQ8TEK3 1739 aa16.54■□□□□ 0.24
RBM39-216ENST00000444878 UPF3BQ9BZI7 483 aaKnown RBP16.54■□□□□ 0.24
RBM39-216ENST00000444878 NUCB2P80303 420 aa16.53■□□□□ 0.24
RBM39-216ENST00000444878 IL27Q8NEV9 243 aa16.53■□□□□ 0.24
RBM39-216ENST00000444878 TMX3Q96JJ7 454 aa16.53■□□□□ 0.24
RBM39-216ENST00000444878 FSD1Q9BTV5 496 aa16.53■□□□□ 0.24
RBM39-216ENST00000444878 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.53■□□□□ 0.24
RBM39-216ENST00000444878 TRIM28Q13263 835 aaKnown RBP16.52■□□□□ 0.24
RBM39-216ENST00000444878 SPATA31A1Q5TZJ5 1347 aa16.52■□□□□ 0.24
RBM39-216ENST00000444878 THRAP3Q9Y2W1 955 aaKnown RBP16.52■□□□□ 0.24
RBM39-216ENST00000444878 ATP5JP18859 108 aa16.52■□□□□ 0.23
RBM39-216ENST00000444878 SSFA2P28290 1259 aa16.52■□□□□ 0.23
RBM39-216ENST00000444878 PRIM1P49642 420 aaKnown RBP16.52■□□□□ 0.23
RBM39-216ENST00000444878 DDB1Q16531 1140 aa16.52■□□□□ 0.23
RBM39-216ENST00000444878 ZGPATQ8N5A5 531 aaKnown RBP16.52■□□□□ 0.23
RBM39-216ENST00000444878 SNX14Q9Y5W7 946 aa16.52■□□□□ 0.23
RBM39-216ENST00000444878 MAP3K15Q6ZN16 1313 aa16.51■□□□□ 0.23
RBM39-216ENST00000444878 NUTM2BA6NNL0 878 aaPredicted RBP16.51■□□□□ 0.23
RBM39-216ENST00000444878 NUTM2EB1AL46 878 aaPredicted RBP16.51■□□□□ 0.23
RBM39-216ENST00000444878 CYP19A1P11511 503 aaPredicted RBP16.51■□□□□ 0.23
RBM39-216ENST00000444878 NUTM2AQ8IVF1 878 aaPredicted RBP16.51■□□□□ 0.23
RBM39-216ENST00000444878 SLC4A9Q96Q91 983 aa16.51■□□□□ 0.23
RBM39-216ENST00000444878 TRAK2O60296 914 aa16.51■□□□□ 0.23
RBM39-216ENST00000444878 IL15P40933 162 aaPredicted RBP16.51■□□□□ 0.23
RBM39-216ENST00000444878 NMIQ13287 307 aaPredicted RBP16.51■□□□□ 0.23
RBM39-216ENST00000444878 DBNDD2Q9BQY9 259 aa16.51■□□□□ 0.23
RBM39-216ENST00000444878 PTH1RQ03431 593 aa16.5■□□□□ 0.23
RBM39-216ENST00000444878 GIGYF2Q6Y7W6 1299 aaKnown RBP16.5■□□□□ 0.23
RBM39-216ENST00000444878 NOL8Q76FK4 1167 aaKnown RBP16.5■□□□□ 0.23
RBM39-216ENST00000444878 ATG9AQ7Z3C6 839 aa16.5■□□□□ 0.23
RBM39-216ENST00000444878 FAM227BQ96M60 508 aa16.5■□□□□ 0.23
RBM39-216ENST00000444878 NUP98P52948 1817 aa16.5■□□□□ 0.23
RBM39-216ENST00000444878 ANKRD36CQ5JPF3 1778 aa16.5■□□□□ 0.23
RBM39-216ENST00000444878 CCDC171Q6TFL3 1326 aa16.5■□□□□ 0.23
RBM39-216ENST00000444878 TOM1O60784 492 aa16.49■□□□□ 0.23
RBM39-216ENST00000444878 PIP4K2BP78356 416 aa16.49■□□□□ 0.23
RBM39-216ENST00000444878 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
RBM39-216ENST00000444878 A0A0G2JS52 829 aa16.49■□□□□ 0.23
RBM39-216ENST00000444878 EYA2O00167 538 aa16.49■□□□□ 0.23
RBM39-216ENST00000444878 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
RBM39-216ENST00000444878 HSP90AB3PQ58FF7 597 aa16.49■□□□□ 0.23
RBM39-216ENST00000444878 ZNF594Q96JF6 807 aaPredicted RBP16.49■□□□□ 0.23
RBM39-216ENST00000444878 ZBTB1Q9Y2K1 713 aa16.49■□□□□ 0.23
RBM39-216ENST00000444878 NWD2Q9ULI1 1742 aa16.48■□□□□ 0.23
RBM39-216ENST00000444878 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
RBM39-216ENST00000444878 PTMSP20962 102 aa16.48■□□□□ 0.23
RBM39-216ENST00000444878 CUL4AQ13619 759 aa16.48■□□□□ 0.23
RBM39-216ENST00000444878 CCDC57Q2TAC2 916 aa16.48■□□□□ 0.23
RBM39-216ENST00000444878 ZBTB38Q8NAP3 1195 aaPredicted RBP16.48■□□□□ 0.23
RBM39-216ENST00000444878 FAM89AQ96GI7 184 aa16.48■□□□□ 0.23
RBM39-216ENST00000444878 NEUROD6Q96NK8 337 aa16.48■□□□□ 0.23
RBM39-216ENST00000444878 GPR108Q9NPR9 543 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms