RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 ANKRD36CQ5JPF3 1778 aa21.94■■□□□ 1.1
AP1S3-207ENST00000444408 ANKRD31Q8N7Z5 1873 aa21.94■■□□□ 1.1
AP1S3-207ENST00000444408 TGFB2P61812 414 aa21.93■■□□□ 1.1
AP1S3-207ENST00000444408 PARP10Q53GL7 1025 aa21.93■■□□□ 1.1
AP1S3-207ENST00000444408 ST5P78524 1137 aa21.92■■□□□ 1.1
AP1S3-207ENST00000444408 BRIP1Q9BX63 1249 aa21.92■■□□□ 1.1
AP1S3-207ENST00000444408 IGKV5-2P06315 115 aa21.91■■□□□ 1.1
AP1S3-207ENST00000444408 GTF2E1P29083 439 aaPredicted RBP21.91■■□□□ 1.1
AP1S3-207ENST00000444408 C2CD5Q86YS7 1000 aa21.91■■□□□ 1.1
AP1S3-207ENST00000444408 JARID2Q92833 1246 aaPredicted RBP21.91■■□□□ 1.1
AP1S3-207ENST00000444408 UTP14AQ9BVJ6 771 aaKnown RBP21.91■■□□□ 1.1
AP1S3-207ENST00000444408 SMC4Q9NTJ3 1288 aa21.91■■□□□ 1.1
AP1S3-207ENST00000444408 RARSP54136 660 aaKnown RBP21.9■■□□□ 1.1
AP1S3-207ENST00000444408 CWF19L2Q2TBE0 894 aaKnown RBP21.9■■□□□ 1.1
AP1S3-207ENST00000444408 RTL5Q5HYW3 569 aaPredicted RBP21.9■■□□□ 1.1
AP1S3-207ENST00000444408 C3orf67Q6ZVT6 689 aa21.9■■□□□ 1.1
AP1S3-207ENST00000444408 PPP1R42Q7Z4L9 355 aa21.9■■□□□ 1.1
AP1S3-207ENST00000444408 NYXQ9GZU5 481 aa21.9■■□□□ 1.1
AP1S3-207ENST00000444408 TRMT112Q9UI30 125 aaKnown RBP21.9■■□□□ 1.1
AP1S3-207ENST00000444408 IBTKQ9P2D0 1353 aaPredicted RBP21.89■■□□□ 1.1
AP1S3-207ENST00000444408 TNRC6CQ9HCJ0 1690 aaKnown RBP21.89■■□□□ 1.1
AP1S3-207ENST00000444408 CT47B1P0C2W7 299 aaPredicted RBP21.89■■□□□ 1.09
AP1S3-207ENST00000444408 TRIM28Q13263 835 aaKnown RBP21.89■■□□□ 1.09
AP1S3-207ENST00000444408 ALDH1L2Q3SY69 923 aa21.89■■□□□ 1.09
AP1S3-207ENST00000444408 DNAAF4Q8WXU2 420 aa21.89■■□□□ 1.09
AP1S3-207ENST00000444408 HCLS1P14317 486 aaPredicted RBP21.88■■□□□ 1.09
AP1S3-207ENST00000444408 FAM89AQ96GI7 184 aa21.88■■□□□ 1.09
AP1S3-207ENST00000444408 COL11A2P13942 1736 aaPredicted RBP21.88■■□□□ 1.09
AP1S3-207ENST00000444408 PDE6BP35913 854 aa21.87■■□□□ 1.09
AP1S3-207ENST00000444408 CEP350Q5VT06 3117 aa21.86■■□□□ 1.09
AP1S3-207ENST00000444408 NEURL1BA8MQ27 555 aa21.86■■□□□ 1.09
AP1S3-207ENST00000444408 H0YIN7 160 aa21.86■■□□□ 1.09
AP1S3-207ENST00000444408 BCAR3O75815 825 aa21.86■■□□□ 1.09
AP1S3-207ENST00000444408 CACNA1FO60840 1977 aa21.86■■□□□ 1.09
AP1S3-207ENST00000444408 CCDC191Q8NCU4 936 aa21.85■■□□□ 1.09
AP1S3-207ENST00000444408 ZNF622Q969S3 477 aaKnown RBP eCLIP21.85■■□□□ 1.09
AP1S3-207ENST00000444408 CWC25Q9NXE8 425 aaPredicted RBP21.85■■□□□ 1.09
AP1S3-207ENST00000444408 BCS1LQ9Y276 419 aa21.85■■□□□ 1.09
AP1S3-207ENST00000444408 SH3TC1Q8TE82 1336 aa21.84■■□□□ 1.09
AP1S3-207ENST00000444408 KLRG2A4D1S0 409 aaPredicted RBP21.84■■□□□ 1.09
AP1S3-207ENST00000444408 SRGNP10124 158 aa21.84■■□□□ 1.09
AP1S3-207ENST00000444408 NEXNQ0ZGT2 675 aa21.84■■□□□ 1.09
AP1S3-207ENST00000444408 SLC10A5Q5PT55 438 aa21.84■■□□□ 1.09
AP1S3-207ENST00000444408 BEND3Q5T5X7 828 aa21.84■■□□□ 1.09
AP1S3-207ENST00000444408 SLC4A10Q6U841 1118 aa21.84■■□□□ 1.09
AP1S3-207ENST00000444408 PIM2Q9P1W9 311 aa21.84■■□□□ 1.09
AP1S3-207ENST00000444408 NOB1Q9ULX3 412 aaKnown RBP21.84■■□□□ 1.09
AP1S3-207ENST00000444408 BRCA1P38398 1863 aaKnown RBP21.82■■□□□ 1.08
AP1S3-207ENST00000444408 ZBTB38Q8NAP3 1195 aaPredicted RBP21.82■■□□□ 1.08
AP1S3-207ENST00000444408 LINS1Q8NG48 757 aa21.82■■□□□ 1.08
AP1S3-207ENST00000444408 TNNQ9UQP3 1299 aa21.82■■□□□ 1.08
AP1S3-207ENST00000444408 PTPRCP08575 1304 aa21.81■■□□□ 1.08
AP1S3-207ENST00000444408 RNF123Q5XPI4 1314 aa21.81■■□□□ 1.08
AP1S3-207ENST00000444408 RIC1Q4ADV7 1423 aa21.81■■□□□ 1.08
AP1S3-207ENST00000444408 PCCAP05165 728 aaPredicted RBP21.81■■□□□ 1.08
AP1S3-207ENST00000444408 GCKRQ14397 625 aa21.81■■□□□ 1.08
AP1S3-207ENST00000444408 CRY2Q49AN0 593 aa21.81■■□□□ 1.08
AP1S3-207ENST00000444408 DALRD3Q5D0E6 543 aaKnown RBP21.81■■□□□ 1.08
AP1S3-207ENST00000444408 IFFO2Q5TF58 517 aa21.81■■□□□ 1.08
AP1S3-207ENST00000444408 DLEC1Q9Y238 1755 aa21.81■■□□□ 1.08
AP1S3-207ENST00000444408 IRS4O14654 1257 aaPredicted RBP21.8■■□□□ 1.08
AP1S3-207ENST00000444408 BRPF1P55201 1214 aaPredicted RBP21.8■■□□□ 1.08
AP1S3-207ENST00000444408 SLC51AQ86UW1 340 aa21.8■■□□□ 1.08
AP1S3-207ENST00000444408 MASTLQ96GX5 879 aa21.8■■□□□ 1.08
AP1S3-207ENST00000444408 GPBP1L1Q9HC44 474 aaPredicted RBP21.8■■□□□ 1.08
AP1S3-207ENST00000444408 ZNF219Q9P2Y4 722 aaPredicted RBP21.8■■□□□ 1.08
AP1S3-207ENST00000444408 NPR1P16066 1061 aa21.79■■□□□ 1.08
AP1S3-207ENST00000444408 STYK1Q6J9G0 422 aa21.79■■□□□ 1.08
AP1S3-207ENST00000444408 TTLL6Q8N841 843 aa21.79■■□□□ 1.08
AP1S3-207ENST00000444408 NLRP3Q96P20 1036 aa21.79■■□□□ 1.08
AP1S3-207ENST00000444408 DDX60Q8IY21 1712 aaKnown RBP21.79■■□□□ 1.08
AP1S3-207ENST00000444408 H7C1W4 665 aa21.78■■□□□ 1.08
AP1S3-207ENST00000444408 UBE3BQ7Z3V4 1068 aa21.78■■□□□ 1.08
AP1S3-207ENST00000444408 PDZRN3Q9UPQ7 1066 aa21.78■■□□□ 1.08
AP1S3-207ENST00000444408 PRPF40BQ6NWY9 871 aaKnown RBP21.77■■□□□ 1.08
AP1S3-207ENST00000444408 FRAT1Q92837 279 aaPredicted RBP21.77■■□□□ 1.08
AP1S3-207ENST00000444408 CASP7P55210 303 aa21.76■■□□□ 1.07
AP1S3-207ENST00000444408 OLFM4Q6UX06 510 aa21.76■■□□□ 1.07
AP1S3-207ENST00000444408 RPGRQ92834 1020 aaKnown RBP21.76■■□□□ 1.07
AP1S3-207ENST00000444408 SRCIN1Q9C0H9 1055 aa21.76■■□□□ 1.07
AP1S3-207ENST00000444408 LAMB2P55268 1798 aa21.76■■□□□ 1.07
AP1S3-207ENST00000444408 C21orf2O43822 256 aa21.75■■□□□ 1.07
AP1S3-207ENST00000444408 HOXA10P31260 410 aaPredicted RBP21.75■■□□□ 1.07
AP1S3-207ENST00000444408 CCDC85AQ96PX6 553 aaPredicted RBP21.75■■□□□ 1.07
AP1S3-207ENST00000444408 SLX4Q8IY92 1834 aa21.75■■□□□ 1.07
AP1S3-207ENST00000444408 COL4A1P02462 1669 aa21.75■■□□□ 1.07
AP1S3-207ENST00000444408 KIF16BQ96L93 1317 aa21.75■■□□□ 1.07
AP1S3-207ENST00000444408 CNKSR1Q969H4 720 aa21.74■■□□□ 1.07
AP1S3-207ENST00000444408 CDHR2Q9BYE9 1310 aa21.74■■□□□ 1.07
AP1S3-207ENST00000444408 ALDH1L1O75891 902 aa21.73■■□□□ 1.07
AP1S3-207ENST00000444408 HSPA6P17066 643 aa21.73■■□□□ 1.07
AP1S3-207ENST00000444408 API5Q9BZZ5 524 aaKnown RBP21.73■■□□□ 1.07
AP1S3-207ENST00000444408 CACNA1SQ13698 1873 aa21.73■■□□□ 1.07
AP1S3-207ENST00000444408 GRM8O00222 908 aa21.72■■□□□ 1.07
AP1S3-207ENST00000444408 PDE8AO60658 829 aa21.72■■□□□ 1.07
AP1S3-207ENST00000444408 TRIM27P14373 513 aa21.72■■□□□ 1.07
AP1S3-207ENST00000444408 SF3B3Q15393 1217 aaKnown RBP21.72■■□□□ 1.07
AP1S3-207ENST00000444408 ARHGAP27Q6ZUM4 889 aa21.72■■□□□ 1.07
AP1S3-207ENST00000444408 C7orf43Q8WVR3 580 aa21.72■■□□□ 1.07
AP1S3-207ENST00000444408 CLUAP1Q96AJ1 413 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms