RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 PI4KAP1Q8N8J0 262 aa23.23■■□□□ 1.31
LRCH1-204ENST00000443945 MYD88Q99836 296 aa23.23■■□□□ 1.31
LRCH1-204ENST00000443945 FLIIQ13045 1269 aa23.23■■□□□ 1.31
LRCH1-204ENST00000443945 RTL5Q5HYW3 569 aaPredicted RBP23.23■■□□□ 1.31
LRCH1-204ENST00000443945 UTP14AQ9BVJ6 771 aaKnown RBP23.23■■□□□ 1.31
LRCH1-204ENST00000443945 ADCY9O60503 1353 aa23.22■■□□□ 1.31
LRCH1-204ENST00000443945 C3orf67Q6ZVT6 689 aa23.22■■□□□ 1.31
LRCH1-204ENST00000443945 ISCA1Q9BUE6 129 aa23.22■■□□□ 1.31
LRCH1-204ENST00000443945 TRMT112Q9UI30 125 aaKnown RBP23.22■■□□□ 1.31
LRCH1-204ENST00000443945 DLEC1Q9Y238 1755 aa23.22■■□□□ 1.31
LRCH1-204ENST00000443945 DDX58O95786 925 aaKnown RBP23.21■■□□□ 1.31
LRCH1-204ENST00000443945 SRGNP10124 158 aa23.21■■□□□ 1.31
LRCH1-204ENST00000443945 TRMT2AQ8IZ69 625 aaKnown RBP23.21■■□□□ 1.31
LRCH1-204ENST00000443945 ZNF219Q9P2Y4 722 aaPredicted RBP23.21■■□□□ 1.31
LRCH1-204ENST00000443945 GRIN3BO60391 1043 aa23.21■■□□□ 1.31
LRCH1-204ENST00000443945 FKBP5Q13451 457 aaPredicted RBP23.2■■□□□ 1.3
LRCH1-204ENST00000443945 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
LRCH1-204ENST00000443945 KSR2Q6VAB6 950 aa23.2■■□□□ 1.3
LRCH1-204ENST00000443945 TTLL6Q8N841 843 aa23.2■■□□□ 1.3
LRCH1-204ENST00000443945 IBTKQ9P2D0 1353 aaPredicted RBP23.2■■□□□ 1.3
LRCH1-204ENST00000443945 HCLS1P14317 486 aaPredicted RBP23.19■■□□□ 1.3
LRCH1-204ENST00000443945 JARID2Q92833 1246 aaPredicted RBP23.19■■□□□ 1.3
LRCH1-204ENST00000443945 FAM89AQ96GI7 184 aa23.19■■□□□ 1.3
LRCH1-204ENST00000443945 METTL22Q9BUU2 404 aaPredicted RBP23.18■■□□□ 1.3
LRCH1-204ENST00000443945 CACNA1SQ13698 1873 aa23.18■■□□□ 1.3
LRCH1-204ENST00000443945 ARHGAP27Q6ZUM4 889 aa23.18■■□□□ 1.3
LRCH1-204ENST00000443945 F6X3S4 739 aa23.17■■□□□ 1.3
LRCH1-204ENST00000443945 MASTLQ96GX5 879 aa23.17■■□□□ 1.3
LRCH1-204ENST00000443945 KLRG2A4D1S0 409 aaPredicted RBP23.17■■□□□ 1.3
LRCH1-204ENST00000443945 CWF19L2Q2TBE0 894 aaKnown RBP23.17■■□□□ 1.3
LRCH1-204ENST00000443945 SH3TC1Q8TE82 1336 aa23.16■■□□□ 1.3
LRCH1-204ENST00000443945 IGKV5-2P06315 115 aa23.16■■□□□ 1.3
LRCH1-204ENST00000443945 SSH1Q8WYL5 1049 aa23.16■■□□□ 1.3
LRCH1-204ENST00000443945 YY1P25490 414 aa23.15■■□□□ 1.3
LRCH1-204ENST00000443945 ARFGEF1Q9Y6D6 1849 aa23.15■■□□□ 1.3
LRCH1-204ENST00000443945 SLX4Q8IY92 1834 aa23.15■■□□□ 1.3
LRCH1-204ENST00000443945 PRPF40BQ6NWY9 871 aaKnown RBP23.15■■□□□ 1.3
LRCH1-204ENST00000443945 C21orf2O43822 256 aa23.14■■□□□ 1.29
LRCH1-204ENST00000443945 NPR1P16066 1061 aa23.14■■□□□ 1.29
LRCH1-204ENST00000443945 TRIM28Q13263 835 aaKnown RBP23.14■■□□□ 1.29
LRCH1-204ENST00000443945 STYK1Q6J9G0 422 aa23.14■■□□□ 1.29
LRCH1-204ENST00000443945 SLC51AQ86UW1 340 aa23.14■■□□□ 1.29
LRCH1-204ENST00000443945 PDZRN3Q9UPQ7 1066 aa23.14■■□□□ 1.29
LRCH1-204ENST00000443945 CACNA1FO60840 1977 aa23.14■■□□□ 1.29
LRCH1-204ENST00000443945 CRY2Q49AN0 593 aa23.13■■□□□ 1.29
LRCH1-204ENST00000443945 CHD4Q14839 1912 aa23.13■■□□□ 1.29
LRCH1-204ENST00000443945 OLFM4Q6UX06 510 aa23.13■■□□□ 1.29
LRCH1-204ENST00000443945 DNAAF4Q8WXU2 420 aa23.13■■□□□ 1.29
LRCH1-204ENST00000443945 NLRP3Q96P20 1036 aa23.13■■□□□ 1.29
LRCH1-204ENST00000443945 SLC10A5Q5PT55 438 aa23.12■■□□□ 1.29
LRCH1-204ENST00000443945 MRPL50Q8N5N7 158 aaKnown RBP23.12■■□□□ 1.29
LRCH1-204ENST00000443945 RPGRQ92834 1020 aaKnown RBP23.12■■□□□ 1.29
LRCH1-204ENST00000443945 CNKSR1Q969H4 720 aa23.12■■□□□ 1.29
LRCH1-204ENST00000443945 CWC25Q9NXE8 425 aaPredicted RBP23.12■■□□□ 1.29
LRCH1-204ENST00000443945 NEXNQ0ZGT2 675 aa23.12■■□□□ 1.29
LRCH1-204ENST00000443945 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
LRCH1-204ENST00000443945 RIC1Q4ADV7 1423 aa23.11■■□□□ 1.29
LRCH1-204ENST00000443945 RNF123Q5XPI4 1314 aa23.11■■□□□ 1.29
LRCH1-204ENST00000443945 ZBED9Q6R2W3 1325 aa23.11■■□□□ 1.29
LRCH1-204ENST00000443945 NEURL1BA8MQ27 555 aa23.1■■□□□ 1.29
LRCH1-204ENST00000443945 RASSF7Q02833 373 aa23.1■■□□□ 1.29
LRCH1-204ENST00000443945 DDX60Q8IY21 1712 aaKnown RBP23.1■■□□□ 1.29
LRCH1-204ENST00000443945 LAMB2P55268 1798 aa23.1■■□□□ 1.29
LRCH1-204ENST00000443945 IRS4O14654 1257 aaPredicted RBP23.1■■□□□ 1.29
LRCH1-204ENST00000443945 SMC4Q9NTJ3 1288 aa23.1■■□□□ 1.29
LRCH1-204ENST00000443945 ZBTB38Q8NAP3 1195 aaPredicted RBP23.09■■□□□ 1.29
LRCH1-204ENST00000443945 SLC4A10Q6U841 1118 aa23.09■■□□□ 1.29
LRCH1-204ENST00000443945 YTHDC1Q96MU7 727 aaKnown RBP23.09■■□□□ 1.29
LRCH1-204ENST00000443945 PCCAP05165 728 aaPredicted RBP23.07■■□□□ 1.28
LRCH1-204ENST00000443945 NFKBIEO00221 500 aa23.06■■□□□ 1.28
LRCH1-204ENST00000443945 HOXA10P31260 410 aaPredicted RBP23.06■■□□□ 1.28
LRCH1-204ENST00000443945 RBM17Q96I25 401 aaKnown RBP23.06■■□□□ 1.28
LRCH1-204ENST00000443945 CCDC85AQ96PX6 553 aaPredicted RBP23.06■■□□□ 1.28
LRCH1-204ENST00000443945 TAF1P21675 1872 aa23.06■■□□□ 1.28
LRCH1-204ENST00000443945 CENPBP07199 599 aaPredicted RBP23.05■■□□□ 1.28
LRCH1-204ENST00000443945 ALDH1B1P30837 517 aa23.05■■□□□ 1.28
LRCH1-204ENST00000443945 PRELPP51888 382 aa23.05■■□□□ 1.28
LRCH1-204ENST00000443945 UBE3BQ7Z3V4 1068 aa23.05■■□□□ 1.28
LRCH1-204ENST00000443945 LINS1Q8NG48 757 aa23.05■■□□□ 1.28
LRCH1-204ENST00000443945 C7orf43Q8WVR3 580 aa23.05■■□□□ 1.28
LRCH1-204ENST00000443945 ABCC4O15439 1325 aa23.05■■□□□ 1.28
LRCH1-204ENST00000443945 GCKRQ14397 625 aa23.05■■□□□ 1.28
LRCH1-204ENST00000443945 ALDH1L2Q3SY69 923 aa23.05■■□□□ 1.28
LRCH1-204ENST00000443945 BEND3Q5T5X7 828 aa23.05■■□□□ 1.28
LRCH1-204ENST00000443945 RARSP54136 660 aaKnown RBP23.04■■□□□ 1.28
LRCH1-204ENST00000443945 COL4A1P02462 1669 aa23.04■■□□□ 1.28
LRCH1-204ENST00000443945 PRKCSHP14314 528 aaPredicted RBP23.03■■□□□ 1.28
LRCH1-204ENST00000443945 CRAMP1Q96RY5 1269 aa23.03■■□□□ 1.28
LRCH1-204ENST00000443945 CT47B1P0C2W7 299 aaPredicted RBP23.02■■□□□ 1.28
LRCH1-204ENST00000443945 C9orf131Q5VYM1 1079 aa23.02■■□□□ 1.28
LRCH1-204ENST00000443945 DDX46Q7L014 1031 aaKnown RBP23.02■■□□□ 1.28
LRCH1-204ENST00000443945 PPEF1O14829 653 aaPredicted RBP23.01■■□□□ 1.27
LRCH1-204ENST00000443945 RNF181Q9P0P0 153 aa23.01■■□□□ 1.27
LRCH1-204ENST00000443945 NOB1Q9ULX3 412 aaKnown RBP23.01■■□□□ 1.27
LRCH1-204ENST00000443945 H7C1W4 665 aa23.01■■□□□ 1.27
LRCH1-204ENST00000443945 PDE8AO60658 829 aa23■■□□□ 1.27
LRCH1-204ENST00000443945 BCAR3O75815 825 aa23■■□□□ 1.27
LRCH1-204ENST00000443945 SF3B3Q15393 1217 aaKnown RBP23■■□□□ 1.27
LRCH1-204ENST00000443945 CELF1Q92879 486 aaKnown RBP23■■□□□ 1.27
LRCH1-204ENST00000443945 SEC31BQ9NQW1 1179 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms