RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 SLC10A5Q5PT55 438 aa21.34■■□□□ 1.01
CTDSP1-204ENST00000443891 RBM17Q96I25 401 aaKnown RBP21.34■■□□□ 1.01
CTDSP1-204ENST00000443891 IARSP41252 1262 aaKnown RBP21.33■■□□□ 1.01
CTDSP1-204ENST00000443891 CHADLQ6NUI6 762 aa21.33■■□□□ 1.01
CTDSP1-204ENST00000443891 NLRP3Q96P20 1036 aa21.33■■□□□ 1.01
CTDSP1-204ENST00000443891 SYNE4Q8N205 404 aa21.32■■□□□ 1
CTDSP1-204ENST00000443891 UTP14AQ9BVJ6 771 aaKnown RBP21.32■■□□□ 1
CTDSP1-204ENST00000443891 DDX21Q9NR30 783 aaKnown RBP eCLIP21.32■■□□□ 1
CTDSP1-204ENST00000443891 ZNF277Q9NRM2 450 aaPredicted RBP21.32■■□□□ 1
CTDSP1-204ENST00000443891 SNED1Q8TER0 1413 aa21.31■■□□□ 1
CTDSP1-204ENST00000443891 CACNA1SQ13698 1873 aa21.31■■□□□ 1
CTDSP1-204ENST00000443891 FZD9O00144 591 aa21.31■■□□□ 1
CTDSP1-204ENST00000443891 JDP2Q8WYK2 163 aa21.31■■□□□ 1
CTDSP1-204ENST00000443891 NEUROD2Q15784 382 aa21.3■■□□□ 1
CTDSP1-204ENST00000443891 LDHDQ86WU2 507 aa21.3■■□□□ 1
CTDSP1-204ENST00000443891 TMX4Q9H1E5 349 aaPredicted RBP21.3■■□□□ 1
CTDSP1-204ENST00000443891 VPS33BQ9H267 617 aa21.3■■□□□ 1
CTDSP1-204ENST00000443891 PRKRIP1Q9H875 184 aaPredicted RBP21.3■■□□□ 1
CTDSP1-204ENST00000443891 ADAMTS8Q9UP79 889 aa21.3■■□□□ 1
CTDSP1-204ENST00000443891 TRIM35Q9UPQ4 493 aa21.3■■□□□ 1
CTDSP1-204ENST00000443891 HTRA3P83110 453 aa21.29■■□□□ 1
CTDSP1-204ENST00000443891 COPS6Q7L5N1 327 aa21.29■■□□□ 1
CTDSP1-204ENST00000443891 CCDC146Q8IYE0 955 aa21.29■■□□□ 1
CTDSP1-204ENST00000443891 TAF1DQ9H5J8 278 aaPredicted RBP21.29■■□□□ 1
CTDSP1-204ENST00000443891 PROSER3Q2NL68 480 aa21.28■■□□□ 1
CTDSP1-204ENST00000443891 GPC2Q8N158 579 aa21.28■■□□□ 1
CTDSP1-204ENST00000443891 CFAP44Q96MT7 982 aa21.28■■□□□ 1
CTDSP1-204ENST00000443891 SCN4AP35499 1836 aa21.27■■□□□ 1
CTDSP1-204ENST00000443891 TCIRG1Q13488 830 aa21.27■■□□□ 1
CTDSP1-204ENST00000443891 OLFM4Q6UX06 510 aa21.27■■□□□ 1
CTDSP1-204ENST00000443891 PNMA8AQ86V59 439 aaPredicted RBP21.27■■□□□ 1
CTDSP1-204ENST00000443891 XAGE3Q8WTP9 111 aa21.27■■□□□ 1
CTDSP1-204ENST00000443891 CREBZFQ9NS37 354 aa21.27■■□□□ 1
CTDSP1-204ENST00000443891 HACL1Q9UJ83 578 aa21.27■■□□□ 1
CTDSP1-204ENST00000443891 PPEF1O14829 653 aaPredicted RBP21.26■□□□□ 0.99
CTDSP1-204ENST00000443891 CALD1Q05682 793 aaKnown RBP21.26■□□□□ 0.99
CTDSP1-204ENST00000443891 ZNF541Q9H0D2 1346 aa21.26■□□□□ 0.99
CTDSP1-204ENST00000443891 BBOX1O75936 387 aa21.25■□□□□ 0.99
CTDSP1-204ENST00000443891 EIF6P56537 245 aaKnown RBP21.25■□□□□ 0.99
CTDSP1-204ENST00000443891 NLRP10Q86W26 655 aa21.25■□□□□ 0.99
CTDSP1-204ENST00000443891 DBF4Q9UBU7 674 aaPredicted RBP21.25■□□□□ 0.99
CTDSP1-204ENST00000443891 ANXA1P04083 346 aa21.24■□□□□ 0.99
CTDSP1-204ENST00000443891 AIMP1Q12904 312 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-204ENST00000443891 HDGFL1Q5TGJ6 251 aa21.24■□□□□ 0.99
CTDSP1-204ENST00000443891 SUPT20HQ8NEM7 779 aa21.24■□□□□ 0.99
CTDSP1-204ENST00000443891 PLBD2Q8NHP8 589 aa21.24■□□□□ 0.99
CTDSP1-204ENST00000443891 CHMP4AQ9BY43 222 aa21.24■□□□□ 0.99
CTDSP1-204ENST00000443891 ATP6V0A2Q9Y487 856 aa21.24■□□□□ 0.99
CTDSP1-204ENST00000443891 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-204ENST00000443891 EPHX2P34913 555 aa21.23■□□□□ 0.99
CTDSP1-204ENST00000443891 TMC4Q7Z404 712 aa21.23■□□□□ 0.99
CTDSP1-204ENST00000443891 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
CTDSP1-204ENST00000443891 SH3TC1Q8TE82 1336 aa21.23■□□□□ 0.99
CTDSP1-204ENST00000443891 ANKRD13DQ6ZTN6 518 aa21.22■□□□□ 0.99
CTDSP1-204ENST00000443891 LARGE2Q8N3Y3 721 aa21.22■□□□□ 0.99
CTDSP1-204ENST00000443891 NECTIN2Q92692 538 aa21.22■□□□□ 0.99
CTDSP1-204ENST00000443891 CHPF2Q9P2E5 772 aa21.22■□□□□ 0.99
CTDSP1-204ENST00000443891 TRMT112Q9UI30 125 aaKnown RBP21.22■□□□□ 0.99
CTDSP1-204ENST00000443891 PASKQ96RG2 1323 aa21.22■□□□□ 0.99
CTDSP1-204ENST00000443891 ZNF853P0CG23 659 aa21.21■□□□□ 0.99
CTDSP1-204ENST00000443891 POTEIP0CG38 1075 aa21.21■□□□□ 0.99
CTDSP1-204ENST00000443891 POTEJP0CG39 1038 aa21.21■□□□□ 0.99
CTDSP1-204ENST00000443891 C3orf67Q6ZVT6 689 aa21.21■□□□□ 0.99
CTDSP1-204ENST00000443891 SP8Q8IXZ3 490 aa21.21■□□□□ 0.99
CTDSP1-204ENST00000443891 RTFDC1Q9BY42 306 aaPredicted RBP21.21■□□□□ 0.99
CTDSP1-204ENST00000443891 GNAI1P63096 354 aa21.2■□□□□ 0.98
CTDSP1-204ENST00000443891 KRT24Q2M2I5 525 aa21.2■□□□□ 0.98
CTDSP1-204ENST00000443891 DDX46Q7L014 1031 aaKnown RBP21.2■□□□□ 0.98
CTDSP1-204ENST00000443891 IFT57Q9NWB7 429 aa21.2■□□□□ 0.98
CTDSP1-204ENST00000443891 ABCC4O15439 1325 aa21.2■□□□□ 0.98
CTDSP1-204ENST00000443891 LMOD1P29536 600 aaPredicted RBP21.19■□□□□ 0.98
CTDSP1-204ENST00000443891 TRIM28Q13263 835 aaKnown RBP21.19■□□□□ 0.98
CTDSP1-204ENST00000443891 DUSP27Q5VZP5 1158 aa21.19■□□□□ 0.98
CTDSP1-204ENST00000443891 NIM1KQ8IY84 436 aa21.19■□□□□ 0.98
CTDSP1-204ENST00000443891 ANKRD36CQ5JPF3 1778 aa21.18■□□□□ 0.98
CTDSP1-204ENST00000443891 ITGBL1O95965 494 aaPredicted RBP21.18■□□□□ 0.98
CTDSP1-204ENST00000443891 GRAPQ13588 217 aa21.18■□□□□ 0.98
CTDSP1-204ENST00000443891 EAPPQ56P03 285 aaPredicted RBP21.18■□□□□ 0.98
CTDSP1-204ENST00000443891 GRAPLQ8TC17 118 aaPredicted RBP21.18■□□□□ 0.98
CTDSP1-204ENST00000443891 ISCA1Q9BUE6 129 aa21.18■□□□□ 0.98
CTDSP1-204ENST00000443891 MBIPQ9NS73 344 aa21.18■□□□□ 0.98
CTDSP1-204ENST00000443891 PPIP5K2O43314 1243 aa21.17■□□□□ 0.98
CTDSP1-204ENST00000443891 HSP90B1P14625 803 aaKnown RBP21.17■□□□□ 0.98
CTDSP1-204ENST00000443891 CLEC11AQ9Y240 323 aa21.17■□□□□ 0.98
CTDSP1-204ENST00000443891 TMEM88BA6NKF7 163 aa21.16■□□□□ 0.98
CTDSP1-204ENST00000443891 APAF1O14727 1248 aa21.16■□□□□ 0.98
CTDSP1-204ENST00000443891 HCLS1P14317 486 aaPredicted RBP21.16■□□□□ 0.98
CTDSP1-204ENST00000443891 MPNDQ8N594 471 aa21.16■□□□□ 0.98
CTDSP1-204ENST00000443891 SF3B3Q15393 1217 aaKnown RBP21.15■□□□□ 0.98
CTDSP1-204ENST00000443891 DPP8Q6V1X1 898 aaPredicted RBP21.15■□□□□ 0.98
CTDSP1-204ENST00000443891 GJA3Q9Y6H8 435 aa21.15■□□□□ 0.98
CTDSP1-204ENST00000443891 ADAMTSL1Q8N6G6 1762 aa21.15■□□□□ 0.98
CTDSP1-204ENST00000443891 TCERG1O14776 1098 aaKnown RBP21.14■□□□□ 0.97
CTDSP1-204ENST00000443891 USP50Q70EL3 339 aaPredicted RBP21.14■□□□□ 0.97
CTDSP1-204ENST00000443891 CNTROBQ8N137 903 aa21.14■□□□□ 0.97
CTDSP1-204ENST00000443891 ZNRF3Q9ULT6 936 aa21.14■□□□□ 0.97
CTDSP1-204ENST00000443891 CNTNAP1P78357 1384 aa21.13■□□□□ 0.97
CTDSP1-204ENST00000443891 CDHR2Q9BYE9 1310 aa21.13■□□□□ 0.97
CTDSP1-204ENST00000443891 KIAA2012Q0VF49 1180 aa21.13■□□□□ 0.97
CTDSP1-204ENST00000443891 AOC3Q16853 763 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms