RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 EPB41L2O43491 1005 aaKnown RBP5.82□□□□□ -1.48
HERC1-201ENST00000443617 BRD2P25440 801 aaKnown RBP5.82□□□□□ -1.48
HERC1-201ENST00000443617 CCDC70Q6NSX1 233 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 FUCA2Q9BTY2 467 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 TUBBP07437 444 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 KRT32Q14532 448 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 CT47A1Q5JQC4 288 aaPredicted RBP5.82□□□□□ -1.48
HERC1-201ENST00000443617 TUBB2AQ13885 445 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 TUBB2BQ9BVA1 445 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 MAGI1Q96QZ7 1491 aaPredicted RBP5.82□□□□□ -1.48
HERC1-201ENST00000443617 EIF3CLB5ME19 914 aaKnown RBP5.82□□□□□ -1.48
HERC1-201ENST00000443617 EIF3CQ99613 913 aaKnown RBP5.82□□□□□ -1.48
HERC1-201ENST00000443617 CDK19Q9BWU1 502 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 TADA3O75528 432 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 SLC3A2P08195 630 aaKnown RBP5.82□□□□□ -1.48
HERC1-201ENST00000443617 CARD6Q9BX69 1037 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 CDC37L1Q7L3B6 337 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 MCM10Q7L590 875 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 NBPF11Q86T75 865 aa5.82□□□□□ -1.48
HERC1-201ENST00000443617 SYTL4Q96C24 671 aaPredicted RBP5.82□□□□□ -1.48
HERC1-201ENST00000443617 H0YHG0 523 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 ZSCAN16Q9H4T2 348 aaPredicted RBP5.81□□□□□ -1.48
HERC1-201ENST00000443617 PIK3R4Q99570 1358 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 AACSQ86V21 672 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 SMARCE1Q969G3 411 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 ME3Q16798 604 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 AFAP1Q8N556 730 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 SHANK2Q9UPX8 1470 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 CHL1O00533 1208 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 SGSM2O43147 1006 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 GYS2P54840 703 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 CCDC93Q567U6 631 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 NECTIN2Q92692 538 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 ATL3Q6DD88 541 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 CCDC172P0C7W6 258 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 CC2D1AQ6P1N0 951 aaPredicted RBP5.81□□□□□ -1.48
HERC1-201ENST00000443617 TTC6Q86TZ1 520 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 ESF1Q9H501 851 aaKnown RBP5.81□□□□□ -1.48
HERC1-201ENST00000443617 GCC2Q8IWJ2 1684 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 TDO2P48775 406 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 CCDC158Q5M9N0 1113 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 C11orf57Q6ZUT1 292 aaPredicted RBP5.81□□□□□ -1.48
HERC1-201ENST00000443617 PPP1R42Q7Z4L9 355 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 RGS12O14924 1447 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 UBASH3AP57075 661 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 CFAP100Q494V2 611 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 AEBP2Q6ZN18 517 aaPredicted RBP5.81□□□□□ -1.48
HERC1-201ENST00000443617 ECHDC1Q9NTX5 307 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 EBAG9O00559 213 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 A0A087WUV0 522 aaPredicted RBP5.81□□□□□ -1.48
HERC1-201ENST00000443617 CTAGE9A4FU28 777 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 TSR1Q2NL82 804 aaKnown RBP5.81□□□□□ -1.48
HERC1-201ENST00000443617 LCMT1Q9UIC8 334 aa5.81□□□□□ -1.48
HERC1-201ENST00000443617 CLASRPQ8N2M8 674 aaKnown RBP5.8□□□□□ -1.48
HERC1-201ENST00000443617 CTCFLQ8NI51 663 aaPredicted RBP5.8□□□□□ -1.48
HERC1-201ENST00000443617 CEP83Q9Y592 693 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 PHACTR2O75167 634 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 DHX40Q8IX18 779 aaKnown RBP5.8□□□□□ -1.48
HERC1-201ENST00000443617 TM6SF1Q9BZW5 370 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 LARP1Q6PKG0 1096 aaKnown RBP5.8□□□□□ -1.48
HERC1-201ENST00000443617 ERC1Q8IUD2 1116 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 RPAP1Q9BWH6 1393 aaPredicted RBP5.8□□□□□ -1.48
HERC1-201ENST00000443617 MAP9Q49MG5 647 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 LRCH2Q5VUJ6 765 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 FAM173BQ6P4H8 233 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 ZNF622Q969S3 477 aaKnown RBP eCLIP5.8□□□□□ -1.481e-6■■□□□ 12.8
HERC1-201ENST00000443617 ZSWIM6Q9HCJ5 1215 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 FAM83GA6ND36 823 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 DTNBO60941 627 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 CREB3L3Q68CJ9 461 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 CAGE1Q8TC20 777 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 BRF1Q92994 677 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 FAM53CQ9NYF3 392 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 FBLN1P23142 703 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 SART3Q15020 963 aaKnown RBP5.8□□□□□ -1.48
HERC1-201ENST00000443617 KCND1Q9NSA2 647 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 CDR1P51861 262 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 ISM2Q6H9L7 571 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 PHLPP2Q6ZVD8 1323 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 JMYQ8N9B5 988 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 TTC14Q96N46 770 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 XPO4Q9C0E2 1151 aaKnown RBP5.8□□□□□ -1.48
HERC1-201ENST00000443617 GIGYF1O75420 1035 aaPredicted RBP5.8□□□□□ -1.48
HERC1-201ENST00000443617 PIP4K2BP78356 416 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 CLASP1Q7Z460 1538 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 FSD1Q9BTV5 496 aa5.8□□□□□ -1.48
HERC1-201ENST00000443617 RBM28Q9NW13 759 aaKnown RBP5.8□□□□□ -1.48
HERC1-201ENST00000443617 ERLIN2O94905 339 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 FANCCQ00597 558 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 MICALL1Q8N3F8 863 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 B4GALNT4Q76KP1 1039 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 SMARCC1Q92922 1105 aaPredicted RBP5.79□□□□□ -1.48
HERC1-201ENST00000443617 CTAGE15A4D2H0 777 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 CTAGE8P0CG41 777 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 KIF4BQ2VIQ3 1234 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 ARMCX5Q6P1M9 558 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 CTAGE6Q86UF2 777 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 CTAGE4Q8IX94 777 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 LRRN4CLQ8ND94 238 aa5.79□□□□□ -1.48
HERC1-201ENST00000443617 SULT6B1Q6IMI4 303 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms