RNA–Protein interactions for RNA: ENST00000443222.5

ARPC1B-209, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-209ENST00000443222 HSP90AB3PQ58FF7 597 aa20.16■□□□□ 0.82
ARPC1B-209ENST00000443222 PPP1R42Q7Z4L9 355 aa20.16■□□□□ 0.82
ARPC1B-209ENST00000443222 PLBD2Q8NHP8 589 aa20.16■□□□□ 0.82
ARPC1B-209ENST00000443222 TSR2Q969E8 191 aaKnown RBP20.16■□□□□ 0.82
ARPC1B-209ENST00000443222 HYPKQ9NX55 129 aa20.16■□□□□ 0.82
ARPC1B-209ENST00000443222 ZC3H4Q9UPT8 1303 aaKnown RBP20.16■□□□□ 0.82
ARPC1B-209ENST00000443222 TIAM2Q8IVF5 1701 aa20.16■□□□□ 0.82
ARPC1B-209ENST00000443222 SLC10A5Q5PT55 438 aa20.15■□□□□ 0.82
ARPC1B-209ENST00000443222 UTP14AQ9BVJ6 771 aaKnown RBP20.15■□□□□ 0.82
ARPC1B-209ENST00000443222 NMRK2Q9NPI5 230 aa20.15■□□□□ 0.82
ARPC1B-209ENST00000443222 IL16Q14005 1332 aa20.15■□□□□ 0.82
ARPC1B-209ENST00000443222 RNF123Q5XPI4 1314 aa20.14■□□□□ 0.81
ARPC1B-209ENST00000443222 HOXA10P31260 410 aaPredicted RBP20.14■□□□□ 0.81
ARPC1B-209ENST00000443222 OLFM4Q6UX06 510 aa20.14■□□□□ 0.81
ARPC1B-209ENST00000443222 ANKRD13DQ6ZTN6 518 aa20.14■□□□□ 0.81
ARPC1B-209ENST00000443222 ISCA1Q9BUE6 129 aa20.14■□□□□ 0.81
ARPC1B-209ENST00000443222 PHAXQ9H814 394 aaKnown RBP20.14■□□□□ 0.81
ARPC1B-209ENST00000443222 ALDH1B1P30837 517 aa20.13■□□□□ 0.81
ARPC1B-209ENST00000443222 SOGA3Q5TF21 947 aa20.13■□□□□ 0.81
ARPC1B-209ENST00000443222 SYNE4Q8N205 404 aa20.13■□□□□ 0.81
ARPC1B-209ENST00000443222 CCDC88AQ3V6T2 1871 aa20.13■□□□□ 0.81
ARPC1B-209ENST00000443222 CCDC93Q567U6 631 aa20.12■□□□□ 0.81
ARPC1B-209ENST00000443222 SLC51AQ86UW1 340 aa20.12■□□□□ 0.81
ARPC1B-209ENST00000443222 TAOK3Q9H2K8 898 aa20.12■□□□□ 0.81
ARPC1B-209ENST00000443222 DICER1Q9UPY3 1922 aaKnown RBP20.1■□□□□ 0.81
ARPC1B-209ENST00000443222 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
ARPC1B-209ENST00000443222 CRAMP1Q96RY5 1269 aa20.1■□□□□ 0.81
ARPC1B-209ENST00000443222 LAMB2P55268 1798 aa20.1■□□□□ 0.81
ARPC1B-209ENST00000443222 KDM2BQ8NHM5 1336 aa20.09■□□□□ 0.81
ARPC1B-209ENST00000443222 FANCIQ9NVI1 1328 aa20.09■□□□□ 0.81
ARPC1B-209ENST00000443222 FKBP4Q02790 459 aaKnown RBP eCLIP20.09■□□□□ 0.81
ARPC1B-209ENST00000443222 TRIM28Q13263 835 aaKnown RBP20.09■□□□□ 0.81
ARPC1B-209ENST00000443222 CCDC30Q5VVM6 783 aa20.09■□□□□ 0.81
ARPC1B-209ENST00000443222 WDR63Q8IWG1 891 aa20.09■□□□□ 0.81
ARPC1B-209ENST00000443222 RPGRQ92834 1020 aaKnown RBP20.09■□□□□ 0.81
ARPC1B-209ENST00000443222 TRMT112Q9UI30 125 aaKnown RBP20.09■□□□□ 0.81
ARPC1B-209ENST00000443222 SALL2Q9Y467 1007 aaPredicted RBP20.09■□□□□ 0.81
ARPC1B-209ENST00000443222 GLTPD2A6NH11 291 aa20.08■□□□□ 0.81
ARPC1B-209ENST00000443222 ATP5J2-PTCD1G3V325 749 aa20.08■□□□□ 0.81
ARPC1B-209ENST00000443222 HCLS1P14317 486 aaPredicted RBP20.08■□□□□ 0.81
ARPC1B-209ENST00000443222 ZNF428Q96B54 188 aa20.08■□□□□ 0.81
ARPC1B-209ENST00000443222 NLRP3Q96P20 1036 aa20.08■□□□□ 0.81
ARPC1B-209ENST00000443222 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.81
ARPC1B-209ENST00000443222 DDX60Q8IY21 1712 aaKnown RBP20.07■□□□□ 0.8
ARPC1B-209ENST00000443222 SH3TC1Q8TE82 1336 aa20.07■□□□□ 0.8
ARPC1B-209ENST00000443222 TWISTNBQ3B726 338 aaPredicted RBP20.07■□□□□ 0.8
ARPC1B-209ENST00000443222 RBM17Q96I25 401 aaKnown RBP20.07■□□□□ 0.8
ARPC1B-209ENST00000443222 RTKN2Q8IZC4 609 aa20.06■□□□□ 0.8
ARPC1B-209ENST00000443222 RRAGCQ9HB90 399 aa20.06■□□□□ 0.8
ARPC1B-209ENST00000443222 ABCC4O15439 1325 aa20.05■□□□□ 0.8
ARPC1B-209ENST00000443222 POTECB2RU33 542 aa20.05■□□□□ 0.8
ARPC1B-209ENST00000443222 TOMM70O94826 608 aa20.05■□□□□ 0.8
ARPC1B-209ENST00000443222 GOLGA2Q08379 1002 aa20.05■□□□□ 0.8
ARPC1B-209ENST00000443222 RIC3Q7Z5B4 369 aa20.05■□□□□ 0.8
ARPC1B-209ENST00000443222 ZNF277Q9NRM2 450 aaPredicted RBP20.05■□□□□ 0.8
ARPC1B-209ENST00000443222 WDR90Q96KV7 1748 aa20.05■□□□□ 0.8
ARPC1B-209ENST00000443222 ZNF521Q96K83 1311 aa20.04■□□□□ 0.8
ARPC1B-209ENST00000443222 TCERG1O14776 1098 aaKnown RBP20.04■□□□□ 0.8
ARPC1B-209ENST00000443222 PPEF1O14829 653 aaPredicted RBP20.04■□□□□ 0.8
ARPC1B-209ENST00000443222 FAM89AQ96GI7 184 aa20.04■□□□□ 0.8
ARPC1B-209ENST00000443222 PSMD1Q99460 953 aa20.04■□□□□ 0.8
ARPC1B-209ENST00000443222 CHMP4AQ9BY43 222 aa20.04■□□□□ 0.8
ARPC1B-209ENST00000443222 COL4A5P29400 1685 aa20.03■□□□□ 0.8
ARPC1B-209ENST00000443222 CC2D2BQ6DHV5 1058 aa20.03■□□□□ 0.8
ARPC1B-209ENST00000443222 G2E3Q7L622 706 aa20.03■□□□□ 0.8
ARPC1B-209ENST00000443222 MYD88Q99836 296 aa20.03■□□□□ 0.8
ARPC1B-209ENST00000443222 METTL22Q9BUU2 404 aaPredicted RBP20.03■□□□□ 0.8
ARPC1B-209ENST00000443222 COL4A1P02462 1669 aa20.03■□□□□ 0.8
ARPC1B-209ENST00000443222 VAMP4O75379 141 aa20.02■□□□□ 0.8
ARPC1B-209ENST00000443222 IARSP41252 1262 aaKnown RBP20.01■□□□□ 0.79
ARPC1B-209ENST00000443222 EXOSC9Q06265 439 aaKnown RBP20.01■□□□□ 0.79
ARPC1B-209ENST00000443222 SF3B3Q15393 1217 aaKnown RBP20.01■□□□□ 0.79
ARPC1B-209ENST00000443222 RBM46Q8TBY0 533 aaKnown RBP20.01■□□□□ 0.79
ARPC1B-209ENST00000443222 ATP6V0A2Q9Y487 856 aa20.01■□□□□ 0.79
ARPC1B-209ENST00000443222 DDX58O95786 925 aaKnown RBP20■□□□□ 0.79
ARPC1B-209ENST00000443222 HSPA6P17066 643 aa20■□□□□ 0.79
ARPC1B-209ENST00000443222 KSR2Q6VAB6 950 aa20■□□□□ 0.79
ARPC1B-209ENST00000443222 ZBTB38Q8NAP3 1195 aaPredicted RBP20■□□□□ 0.79
ARPC1B-209ENST00000443222 CCDC191Q8NCU4 936 aa20■□□□□ 0.79
ARPC1B-209ENST00000443222 MAP3K2Q9Y2U5 619 aa20■□□□□ 0.79
ARPC1B-209ENST00000443222 PI4KAP2A4QPH2 592 aa19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 DDNO94850 711 aaPredicted RBP19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 IGKV5-2P06315 115 aa19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 GRAPQ13588 217 aa19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 GRIPAP1Q4V328 841 aa19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 RTL5Q5HYW3 569 aaPredicted RBP19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 DPY19L2Q6NUT2 758 aa19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 PI4KAP1Q8N8J0 262 aa19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 GRAPLQ8TC17 118 aaPredicted RBP19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 STK31Q9BXU1 1019 aa19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 ZNF541Q9H0D2 1346 aa19.99■□□□□ 0.79
ARPC1B-209ENST00000443222 FZD9O00144 591 aa19.98■□□□□ 0.79
ARPC1B-209ENST00000443222 IRS4O14654 1257 aaPredicted RBP19.98■□□□□ 0.79
ARPC1B-209ENST00000443222 BBOX1O75936 387 aa19.98■□□□□ 0.79
ARPC1B-209ENST00000443222 SLC4A2P04920 1241 aa19.98■□□□□ 0.79
ARPC1B-209ENST00000443222 PCCAP05165 728 aaPredicted RBP19.98■□□□□ 0.79
ARPC1B-209ENST00000443222 VEGFAP15692 232 aaPredicted RBP19.98■□□□□ 0.79
ARPC1B-209ENST00000443222 DDX46Q7L014 1031 aaKnown RBP19.98■□□□□ 0.79
ARPC1B-209ENST00000443222 LRRC37AA6NMS7 1700 aa19.98■□□□□ 0.79
ARPC1B-209ENST00000443222 TAF1P21675 1872 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms