RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 RASSF7Q02833 373 aa16.92■□□□□ 0.3
TOM1-208ENST00000443206 TSPYL6Q8N831 410 aa16.92■□□□□ 0.3
TOM1-208ENST00000443206 RPGRQ92834 1020 aaKnown RBP16.92■□□□□ 0.3
TOM1-208ENST00000443206 RNF123Q5XPI4 1314 aa16.92■□□□□ 0.3
TOM1-208ENST00000443206 ABCC12Q96J65 1359 aa16.91■□□□□ 0.3
TOM1-208ENST00000443206 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
TOM1-208ENST00000443206 RIC3Q7Z5B4 369 aa16.91■□□□□ 0.3
TOM1-208ENST00000443206 NLRP10Q86W26 655 aa16.91■□□□□ 0.3
TOM1-208ENST00000443206 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
TOM1-208ENST00000443206 TRMT112Q9UI30 125 aaKnown RBP16.91■□□□□ 0.3
TOM1-208ENST00000443206 FER1L6Q2WGJ9 1857 aa16.9■□□□□ 0.3
TOM1-208ENST00000443206 RIC1Q4ADV7 1423 aa16.9■□□□□ 0.3
TOM1-208ENST00000443206 TWISTNBQ3B726 338 aaPredicted RBP16.9■□□□□ 0.3
TOM1-208ENST00000443206 CRY2Q49AN0 593 aa16.9■□□□□ 0.3
TOM1-208ENST00000443206 STK31Q9BXU1 1019 aa16.9■□□□□ 0.3
TOM1-208ENST00000443206 PHAXQ9H814 394 aaKnown RBP16.9■□□□□ 0.3
TOM1-208ENST00000443206 NFKBIEO00221 500 aa16.89■□□□□ 0.29
TOM1-208ENST00000443206 DDX58O95786 925 aaKnown RBP16.89■□□□□ 0.29
TOM1-208ENST00000443206 SLC10A5Q5PT55 438 aa16.89■□□□□ 0.29
TOM1-208ENST00000443206 CACNA1FO60840 1977 aa16.89■□□□□ 0.29
TOM1-208ENST00000443206 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
TOM1-208ENST00000443206 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
TOM1-208ENST00000443206 CCDC93Q567U6 631 aa16.88■□□□□ 0.29
TOM1-208ENST00000443206 C7orf43Q8WVR3 580 aa16.88■□□□□ 0.29
TOM1-208ENST00000443206 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
TOM1-208ENST00000443206 TAOK3Q9H2K8 898 aa16.88■□□□□ 0.29
TOM1-208ENST00000443206 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
TOM1-208ENST00000443206 ATP5J2-PTCD1G3V325 749 aa16.87■□□□□ 0.29
TOM1-208ENST00000443206 C1QTNF8P60827 252 aa16.87■□□□□ 0.29
TOM1-208ENST00000443206 ISCA1Q9BUE6 129 aa16.87■□□□□ 0.29
TOM1-208ENST00000443206 MYH16Q9H6N6 1097 aa16.87■□□□□ 0.29
TOM1-208ENST00000443206 DICER1Q9UPY3 1922 aaKnown RBP16.87■□□□□ 0.29
TOM1-208ENST00000443206 LTBP3Q9NS15 1303 aa16.87■□□□□ 0.29
TOM1-208ENST00000443206 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
TOM1-208ENST00000443206 ZC3H4Q9UPT8 1303 aaKnown RBP16.87■□□□□ 0.29
TOM1-208ENST00000443206 RTKN2Q8IZC4 609 aa16.86■□□□□ 0.29
TOM1-208ENST00000443206 CRAMP1Q96RY5 1269 aa16.86■□□□□ 0.29
TOM1-208ENST00000443206 KDM2BQ8NHM5 1336 aa16.86■□□□□ 0.29
TOM1-208ENST00000443206 CCER2I3L3R5 266 aa16.85■□□□□ 0.29
TOM1-208ENST00000443206 TCERG1O14776 1098 aaKnown RBP16.85■□□□□ 0.29
TOM1-208ENST00000443206 HCLS1P14317 486 aaPredicted RBP16.85■□□□□ 0.29
TOM1-208ENST00000443206 PRELPP51888 382 aa16.85■□□□□ 0.29
TOM1-208ENST00000443206 TRIM28Q13263 835 aaKnown RBP16.85■□□□□ 0.29
TOM1-208ENST00000443206 CC2D2BQ6DHV5 1058 aa16.85■□□□□ 0.29
TOM1-208ENST00000443206 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
TOM1-208ENST00000443206 EXOSC9Q06265 439 aaKnown RBP16.84■□□□□ 0.29
TOM1-208ENST00000443206 C3orf67Q6ZVT6 689 aa16.84■□□□□ 0.29
TOM1-208ENST00000443206 SYNE4Q8N205 404 aa16.84■□□□□ 0.29
TOM1-208ENST00000443206 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
TOM1-208ENST00000443206 FAM89AQ96GI7 184 aa16.84■□□□□ 0.29
TOM1-208ENST00000443206 MYD88Q99836 296 aa16.84■□□□□ 0.29
TOM1-208ENST00000443206 TMX4Q9H1E5 349 aaPredicted RBP16.84■□□□□ 0.29
TOM1-208ENST00000443206 VAMP4O75379 141 aa16.83■□□□□ 0.28
TOM1-208ENST00000443206 LAMB2P55268 1798 aa16.83■□□□□ 0.28
TOM1-208ENST00000443206 FKBP4Q02790 459 aaKnown RBP eCLIP16.83■□□□□ 0.28
TOM1-208ENST00000443206 DPY19L2Q6NUT2 758 aa16.83■□□□□ 0.28
TOM1-208ENST00000443206 KSR2Q6VAB6 950 aa16.83■□□□□ 0.28
TOM1-208ENST00000443206 METTL22Q9BUU2 404 aaPredicted RBP16.83■□□□□ 0.28
TOM1-208ENST00000443206 GLTPD2A6NH11 291 aa16.82■□□□□ 0.28
TOM1-208ENST00000443206 KIF3CO14782 793 aa16.82■□□□□ 0.28
TOM1-208ENST00000443206 HSP90B1P14625 803 aaKnown RBP16.82■□□□□ 0.28
TOM1-208ENST00000443206 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
TOM1-208ENST00000443206 RTL5Q5HYW3 569 aaPredicted RBP16.82■□□□□ 0.28
TOM1-208ENST00000443206 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
TOM1-208ENST00000443206 DDX46Q7L014 1031 aaKnown RBP16.82■□□□□ 0.28
TOM1-208ENST00000443206 CCDC191Q8NCU4 936 aa16.82■□□□□ 0.28
TOM1-208ENST00000443206 NMRK2Q9NPI5 230 aa16.82■□□□□ 0.28
TOM1-208ENST00000443206 SPINK5Q9NQ38 1064 aaPredicted RBP16.82■□□□□ 0.28
TOM1-208ENST00000443206 MAP3K2Q9Y2U5 619 aa16.82■□□□□ 0.28
TOM1-208ENST00000443206 TIAM2Q8IVF5 1701 aa16.82■□□□□ 0.28
TOM1-208ENST00000443206 PI4KAP2A4QPH2 592 aa16.81■□□□□ 0.28
TOM1-208ENST00000443206 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
TOM1-208ENST00000443206 NEXNQ0ZGT2 675 aa16.81■□□□□ 0.28
TOM1-208ENST00000443206 PI4KAP1Q8N8J0 262 aa16.81■□□□□ 0.28
TOM1-208ENST00000443206 ZBTB38Q8NAP3 1195 aaPredicted RBP16.81■□□□□ 0.28
TOM1-208ENST00000443206 ABCC4O15439 1325 aa16.8■□□□□ 0.28
TOM1-208ENST00000443206 IRS4O14654 1257 aaPredicted RBP16.8■□□□□ 0.28
TOM1-208ENST00000443206 BBOX1O75936 387 aa16.8■□□□□ 0.28
TOM1-208ENST00000443206 C16orf71Q8IYS4 520 aaPredicted RBP16.8■□□□□ 0.28
TOM1-208ENST00000443206 RRAGCQ9HB90 399 aa16.8■□□□□ 0.28
TOM1-208ENST00000443206 CWC25Q9NXE8 425 aaPredicted RBP16.8■□□□□ 0.28
TOM1-208ENST00000443206 DDX60Q8IY21 1712 aaKnown RBP16.79■□□□□ 0.28
TOM1-208ENST00000443206 ZNF521Q96K83 1311 aa16.79■□□□□ 0.28
TOM1-208ENST00000443206 FLIIQ13045 1269 aa16.79■□□□□ 0.28
TOM1-208ENST00000443206 G2E3Q7L622 706 aa16.79■□□□□ 0.28
TOM1-208ENST00000443206 PSMD1Q99460 953 aa16.79■□□□□ 0.28
TOM1-208ENST00000443206 ZNF277Q9NRM2 450 aaPredicted RBP16.79■□□□□ 0.28
TOM1-208ENST00000443206 TAF1P21675 1872 aa16.78■□□□□ 0.28
TOM1-208ENST00000443206 TOMM70O94826 608 aa16.78■□□□□ 0.28
TOM1-208ENST00000443206 PCCAP05165 728 aaPredicted RBP16.78■□□□□ 0.28
TOM1-208ENST00000443206 FKBP5Q13451 457 aaPredicted RBP16.78■□□□□ 0.28
TOM1-208ENST00000443206 GRAPQ13588 217 aa16.78■□□□□ 0.28
TOM1-208ENST00000443206 SF3B3Q15393 1217 aaKnown RBP16.78■□□□□ 0.28
TOM1-208ENST00000443206 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
TOM1-208ENST00000443206 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
TOM1-208ENST00000443206 ATP6V0A2Q9Y487 856 aa16.78■□□□□ 0.28
TOM1-208ENST00000443206 IARSP41252 1262 aaKnown RBP16.77■□□□□ 0.28
TOM1-208ENST00000443206 E9PSI1 815 aa16.76■□□□□ 0.27
TOM1-208ENST00000443206 VEGFAP15692 232 aaPredicted RBP16.76■□□□□ 0.27
TOM1-208ENST00000443206 TMC4Q7Z404 712 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms