RNA–Protein interactions for RNA: ENST00000443187.1

PRKD3-203, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-203ENST00000443187 PLBD2Q8NHP8 589 aa14.49□□□□□ -0.09
PRKD3-203ENST00000443187 NYXQ9GZU5 481 aa14.49□□□□□ -0.09
PRKD3-203ENST00000443187 HYPKQ9NX55 129 aa14.49□□□□□ -0.09
PRKD3-203ENST00000443187 RIC1Q4ADV7 1423 aa14.49□□□□□ -0.09
PRKD3-203ENST00000443187 ZNF521Q96K83 1311 aa14.48□□□□□ -0.09
PRKD3-203ENST00000443187 GTF2E1P29083 439 aaPredicted RBP14.48□□□□□ -0.09
PRKD3-203ENST00000443187 PARP10Q53GL7 1025 aa14.48□□□□□ -0.09
PRKD3-203ENST00000443187 WDR63Q8IWG1 891 aa14.48□□□□□ -0.09
PRKD3-203ENST00000443187 CNKSR1Q969H4 720 aa14.48□□□□□ -0.09
PRKD3-203ENST00000443187 ISCA1Q9BUE6 129 aa14.48□□□□□ -0.09
PRKD3-203ENST00000443187 RNF181Q9P0P0 153 aa14.48□□□□□ -0.09
PRKD3-203ENST00000443187 FER1L6Q2WGJ9 1857 aa14.48□□□□□ -0.09
PRKD3-203ENST00000443187 ATP5J2-PTCD1G3V325 749 aa14.47□□□□□ -0.09
PRKD3-203ENST00000443187 TWISTNBQ3B726 338 aaPredicted RBP14.47□□□□□ -0.09
PRKD3-203ENST00000443187 G2E3Q7L622 706 aa14.47□□□□□ -0.09
PRKD3-203ENST00000443187 UTP14AQ9BVJ6 771 aaKnown RBP14.47□□□□□ -0.09
PRKD3-203ENST00000443187 HCLS1P14317 486 aaPredicted RBP14.46□□□□□ -0.09
PRKD3-203ENST00000443187 HSP90AB3PQ58FF7 597 aa14.46□□□□□ -0.09
PRKD3-203ENST00000443187 SLC10A5Q5PT55 438 aa14.46□□□□□ -0.09
PRKD3-203ENST00000443187 PPP1R42Q7Z4L9 355 aa14.46□□□□□ -0.09
PRKD3-203ENST00000443187 SNED1Q8TER0 1413 aa14.46□□□□□ -0.09
PRKD3-203ENST00000443187 LAMB2P55268 1798 aa14.45□□□□□ -0.1
PRKD3-203ENST00000443187 HOXA10P31260 410 aaPredicted RBP14.45□□□□□ -0.1
PRKD3-203ENST00000443187 EXOSC9Q06265 439 aaKnown RBP14.45□□□□□ -0.1
PRKD3-203ENST00000443187 CCDC88AQ3V6T2 1871 aa14.45□□□□□ -0.1
PRKD3-203ENST00000443187 CCDC30Q5VVM6 783 aa14.45□□□□□ -0.1
PRKD3-203ENST00000443187 VAMP4O75379 141 aa14.44□□□□□ -0.1
PRKD3-203ENST00000443187 LMNB1P20700 586 aa14.44□□□□□ -0.1
PRKD3-203ENST00000443187 GPBP1L1Q9HC44 474 aaPredicted RBP14.44□□□□□ -0.1
PRKD3-203ENST00000443187 TRMT112Q9UI30 125 aaKnown RBP14.44□□□□□ -0.1
PRKD3-203ENST00000443187 COL4A1P02462 1669 aa14.44□□□□□ -0.1
PRKD3-203ENST00000443187 DDX60Q8IY21 1712 aaKnown RBP14.44□□□□□ -0.1
PRKD3-203ENST00000443187 KIF3CO14782 793 aa14.43□□□□□ -0.1
PRKD3-203ENST00000443187 RIC3Q7Z5B4 369 aa14.43□□□□□ -0.1
PRKD3-203ENST00000443187 FAM89AQ96GI7 184 aa14.43□□□□□ -0.1
PRKD3-203ENST00000443187 NMRK2Q9NPI5 230 aa14.43□□□□□ -0.1
PRKD3-203ENST00000443187 TIAM2Q8IVF5 1701 aa14.43□□□□□ -0.1
PRKD3-203ENST00000443187 LTBP3Q9NS15 1303 aa14.42□□□□□ -0.1
PRKD3-203ENST00000443187 CCER2I3L3R5 266 aa14.42□□□□□ -0.1
PRKD3-203ENST00000443187 GOLGA2Q08379 1002 aa14.42□□□□□ -0.1
PRKD3-203ENST00000443187 TRIM28Q13263 835 aaKnown RBP14.42□□□□□ -0.1
PRKD3-203ENST00000443187 RTL5Q5HYW3 569 aaPredicted RBP14.42□□□□□ -0.1
PRKD3-203ENST00000443187 MYD88Q99836 296 aa14.42□□□□□ -0.1
PRKD3-203ENST00000443187 RNF123Q5XPI4 1314 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 SH3TC1Q8TE82 1336 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 PI4KAP2A4QPH2 592 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 ALDH1B1P30837 517 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 C1QTNF8P60827 252 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 CCDC93Q567U6 631 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 PI4KAP1Q8N8J0 262 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 JARID2Q92833 1246 aaPredicted RBP14.41□□□□□ -0.1
PRKD3-203ENST00000443187 RPGRQ92834 1020 aaKnown RBP14.41□□□□□ -0.1
PRKD3-203ENST00000443187 NLRP3Q96P20 1036 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 CRAMP1Q96RY5 1269 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 TAOK3Q9H2K8 898 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 MAP3K2Q9Y2U5 619 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 TAF1P21675 1872 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 ABCC4O15439 1325 aa14.41□□□□□ -0.1
PRKD3-203ENST00000443187 IGKV5-2P06315 115 aa14.4□□□□□ -0.1
PRKD3-203ENST00000443187 MIER1Q8N108 512 aa14.4□□□□□ -0.1
PRKD3-203ENST00000443187 METTL22Q9BUU2 404 aaPredicted RBP14.4□□□□□ -0.1
PRKD3-203ENST00000443187 COL4A5P29400 1685 aa14.39□□□□□ -0.11
PRKD3-203ENST00000443187 DICER1Q9UPY3 1922 aaKnown RBP14.39□□□□□ -0.11
PRKD3-203ENST00000443187 KSR2Q6VAB6 950 aa14.39□□□□□ -0.11
PRKD3-203ENST00000443187 RBM17Q96I25 401 aaKnown RBP14.39□□□□□ -0.11
PRKD3-203ENST00000443187 STK31Q9BXU1 1019 aa14.39□□□□□ -0.11
PRKD3-203ENST00000443187 ZNF277Q9NRM2 450 aaPredicted RBP14.39□□□□□ -0.11
PRKD3-203ENST00000443187 PPEF1O14829 653 aaPredicted RBP14.38□□□□□ -0.11
PRKD3-203ENST00000443187 FKBP4Q02790 459 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRKD3-203ENST00000443187 FLIIQ13045 1269 aa14.38□□□□□ -0.11
PRKD3-203ENST00000443187 SOGA3Q5TF21 947 aa14.38□□□□□ -0.11
PRKD3-203ENST00000443187 CDCA7LQ96GN5 454 aa14.38□□□□□ -0.11
PRKD3-203ENST00000443187 MYH16Q9H6N6 1097 aa14.38□□□□□ -0.11
PRKD3-203ENST00000443187 IRS4O14654 1257 aaPredicted RBP14.37□□□□□ -0.11
PRKD3-203ENST00000443187 DDX58O95786 925 aaKnown RBP14.37□□□□□ -0.11
PRKD3-203ENST00000443187 CWF19L2Q2TBE0 894 aaKnown RBP14.37□□□□□ -0.11
PRKD3-203ENST00000443187 DIEXFQ68CQ4 756 aaKnown RBP14.37□□□□□ -0.11
PRKD3-203ENST00000443187 ZBTB38Q8NAP3 1195 aaPredicted RBP14.37□□□□□ -0.11
PRKD3-203ENST00000443187 CCDC191Q8NCU4 936 aa14.37□□□□□ -0.11
PRKD3-203ENST00000443187 ZC3H4Q9UPT8 1303 aaKnown RBP14.37□□□□□ -0.11
PRKD3-203ENST00000443187 GLTPD2A6NH11 291 aa14.36□□□□□ -0.11
PRKD3-203ENST00000443187 POTECB2RU33 542 aa14.36□□□□□ -0.11
PRKD3-203ENST00000443187 PCCAP05165 728 aaPredicted RBP14.36□□□□□ -0.11
PRKD3-203ENST00000443187 SF3B3Q15393 1217 aaKnown RBP14.36□□□□□ -0.11
PRKD3-203ENST00000443187 RTKN2Q8IZC4 609 aa14.36□□□□□ -0.11
PRKD3-203ENST00000443187 CELF1Q92879 486 aaKnown RBP14.36□□□□□ -0.11
PRKD3-203ENST00000443187 CHMP4AQ9BY43 222 aa14.36□□□□□ -0.11
PRKD3-203ENST00000443187 RRAGCQ9HB90 399 aa14.36□□□□□ -0.11
PRKD3-203ENST00000443187 CWC25Q9NXE8 425 aaPredicted RBP14.36□□□□□ -0.11
PRKD3-203ENST00000443187 NEURL1BA8MQ27 555 aa14.35□□□□□ -0.11
PRKD3-203ENST00000443187 SLFN5Q08AF3 891 aa14.35□□□□□ -0.11
PRKD3-203ENST00000443187 PSMD1Q99460 953 aa14.35□□□□□ -0.11
PRKD3-203ENST00000443187 ATP6V0A2Q9Y487 856 aa14.35□□□□□ -0.11
PRKD3-203ENST00000443187 F6X3S4 739 aa14.34□□□□□ -0.11
PRKD3-203ENST00000443187 IARSP41252 1262 aaKnown RBP14.34□□□□□ -0.11
PRKD3-203ENST00000443187 FKBP5Q13451 457 aaPredicted RBP14.34□□□□□ -0.11
PRKD3-203ENST00000443187 GRAPQ13588 217 aa14.34□□□□□ -0.11
PRKD3-203ENST00000443187 DDX46Q7L014 1031 aaKnown RBP14.34□□□□□ -0.11
PRKD3-203ENST00000443187 GRAPLQ8TC17 118 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms