RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 ABT1Q9ULW3 272 aaKnown RBP19.25■□□□□ 0.67
HMGN1-208ENST00000443046 TRPM7Q96QT4 1865 aa19.24■□□□□ 0.67
HMGN1-208ENST00000443046 EPS15P42566 896 aa19.24■□□□□ 0.67
HMGN1-208ENST00000443046 EIF6P56537 245 aaKnown RBP19.24■□□□□ 0.67
HMGN1-208ENST00000443046 FMR1Q06787 632 aaKnown RBP eCLIP19.24■□□□□ 0.672e-6■□□□□ 10.3
HMGN1-208ENST00000443046 CST9Q5W186 159 aa19.24■□□□□ 0.67
HMGN1-208ENST00000443046 CFAP53Q96M91 514 aa19.24■□□□□ 0.67
HMGN1-208ENST00000443046 IBTKQ9P2D0 1353 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-208ENST00000443046 GTF2E1P29083 439 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-208ENST00000443046 TAF7Q15545 349 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-208ENST00000443046 NUTM1Q86Y26 1132 aa19.23■□□□□ 0.67
HMGN1-208ENST00000443046 NUDCQ9Y266 331 aa19.23■□□□□ 0.67
HMGN1-208ENST00000443046 GJA3Q9Y6H8 435 aa19.23■□□□□ 0.67
HMGN1-208ENST00000443046 TNRC18O15417 2968 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-208ENST00000443046 CNGB1Q14028 1251 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-208ENST00000443046 USP50Q70EL3 339 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-208ENST00000443046 CAPNS2Q96L46 248 aa19.22■□□□□ 0.67
HMGN1-208ENST00000443046 U2AF1L5P0DN76 240 aaPredicted RBP19.21■□□□□ 0.67
HMGN1-208ENST00000443046 LMOD1P29536 600 aaPredicted RBP19.21■□□□□ 0.67
HMGN1-208ENST00000443046 ECE1P42892 770 aa19.21■□□□□ 0.67
HMGN1-208ENST00000443046 RGS19P49795 217 aa19.21■□□□□ 0.67
HMGN1-208ENST00000443046 U2AF1Q01081 240 aaKnown RBP eCLIP19.21■□□□□ 0.674e-7■■■■■ 29.1
HMGN1-208ENST00000443046 SLC51AQ86UW1 340 aa19.21■□□□□ 0.67
HMGN1-208ENST00000443046 CCER1Q8TC90 406 aaPredicted RBP19.21■□□□□ 0.67
HMGN1-208ENST00000443046 CRAMP1Q96RY5 1269 aa19.21■□□□□ 0.67
HMGN1-208ENST00000443046 MAP3K15Q6ZN16 1313 aa19.21■□□□□ 0.67
HMGN1-208ENST00000443046 UBN2Q6ZU65 1347 aa19.21■□□□□ 0.67
HMGN1-208ENST00000443046 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
HMGN1-208ENST00000443046 GPR101Q96P66 508 aaPredicted RBP19.2■□□□□ 0.66
HMGN1-208ENST00000443046 MIS18AQ9NYP9 233 aa19.2■□□□□ 0.66
HMGN1-208ENST00000443046 TLL2Q9Y6L7 1015 aa19.2■□□□□ 0.66
HMGN1-208ENST00000443046 KDM3BQ7LBC6 1761 aa19.19■□□□□ 0.66
HMGN1-208ENST00000443046 CYP4F22Q6NT55 531 aa19.19■□□□□ 0.66
HMGN1-208ENST00000443046 TTLL7Q6ZT98 887 aa19.19■□□□□ 0.66
HMGN1-208ENST00000443046 LARGE2Q8N3Y3 721 aa19.19■□□□□ 0.66
HMGN1-208ENST00000443046 RPGRQ92834 1020 aaKnown RBP19.19■□□□□ 0.66
HMGN1-208ENST00000443046 TRAF5O00463 557 aa19.18■□□□□ 0.66
HMGN1-208ENST00000443046 SUSD4Q5VX71 490 aa19.18■□□□□ 0.66
HMGN1-208ENST00000443046 ZNF34Q8IZ26 560 aa19.18■□□□□ 0.66
HMGN1-208ENST00000443046 VPS33BQ9H267 617 aa19.18■□□□□ 0.66
HMGN1-208ENST00000443046 PPP2R1AP30153 589 aa19.17■□□□□ 0.66
HMGN1-208ENST00000443046 MAP2K2P36507 400 aa19.17■□□□□ 0.66
HMGN1-208ENST00000443046 C3orf67Q6ZVT6 689 aa19.17■□□□□ 0.66
HMGN1-208ENST00000443046 RBM17Q96I25 401 aaKnown RBP19.17■□□□□ 0.66
HMGN1-208ENST00000443046 DLG5Q8TDM6 1919 aa19.16■□□□□ 0.66
HMGN1-208ENST00000443046 PPEF1O14829 653 aaPredicted RBP19.16■□□□□ 0.66
HMGN1-208ENST00000443046 NTSR2O95665 410 aa19.16■□□□□ 0.66
HMGN1-208ENST00000443046 EIF4A1P60842 406 aaKnown RBP19.16■□□□□ 0.66
HMGN1-208ENST00000443046 NGEFQ8N5V2 710 aa19.16■□□□□ 0.66
HMGN1-208ENST00000443046 GPRC5DQ9NZD1 345 aa19.16■□□□□ 0.66
HMGN1-208ENST00000443046 PGAP2Q9UHJ9 254 aa19.16■□□□□ 0.66
HMGN1-208ENST00000443046 GPTP24298 496 aa19.15■□□□□ 0.66
HMGN1-208ENST00000443046 KIF6Q6ZMV9 814 aa19.15■□□□□ 0.66
HMGN1-208ENST00000443046 SAPCD2Q86UD0 394 aa19.15■□□□□ 0.66
HMGN1-208ENST00000443046 NIM1KQ8IY84 436 aa19.15■□□□□ 0.66
HMGN1-208ENST00000443046 PNISRQ8TF01 805 aaKnown RBP19.15■□□□□ 0.66
HMGN1-208ENST00000443046 BEGAINQ9BUH8 593 aa19.15■□□□□ 0.66
HMGN1-208ENST00000443046 ADARB2Q9NS39 739 aaKnown RBP19.15■□□□□ 0.66
HMGN1-208ENST00000443046 AOC2O75106 756 aa19.14■□□□□ 0.65
HMGN1-208ENST00000443046 SLC10A5Q5PT55 438 aa19.14■□□□□ 0.65
HMGN1-208ENST00000443046 GIGYF2Q6Y7W6 1299 aaKnown RBP19.14■□□□□ 0.65
HMGN1-208ENST00000443046 HHIPL1Q96JK4 782 aa19.14■□□□□ 0.65
HMGN1-208ENST00000443046 RTFDC1Q9BY42 306 aaPredicted RBP19.14■□□□□ 0.65
HMGN1-208ENST00000443046 RRP7AQ9Y3A4 280 aaKnown RBP19.14■□□□□ 0.65
HMGN1-208ENST00000443046 ATP6V0A2Q9Y487 856 aa19.14■□□□□ 0.65
HMGN1-208ENST00000443046 PPIP5K2O43314 1243 aa19.13■□□□□ 0.65
HMGN1-208ENST00000443046 MLLT1Q03111 559 aaPredicted RBP19.13■□□□□ 0.65
HMGN1-208ENST00000443046 CXCL9Q07325 125 aa19.13■□□□□ 0.65
HMGN1-208ENST00000443046 PAXIP1Q6ZW49 1069 aaPredicted RBP19.13■□□□□ 0.65
HMGN1-208ENST00000443046 ZBTB3Q9H5J0 574 aa19.13■□□□□ 0.65
HMGN1-208ENST00000443046 ZNRF3Q9ULT6 936 aa19.13■□□□□ 0.65
HMGN1-208ENST00000443046 CCDC85CA6NKD9 419 aa19.12■□□□□ 0.65
HMGN1-208ENST00000443046 MYL6BP14649 208 aa19.12■□□□□ 0.65
HMGN1-208ENST00000443046 AOC3Q16853 763 aa19.12■□□□□ 0.65
HMGN1-208ENST00000443046 LRP10Q7Z4F1 713 aa19.12■□□□□ 0.65
HMGN1-208ENST00000443046 ERBB4Q15303 1308 aa19.11■□□□□ 0.65
HMGN1-208ENST00000443046 TCERG1O14776 1098 aaKnown RBP19.11■□□□□ 0.65
HMGN1-208ENST00000443046 CA12O43570 354 aa19.11■□□□□ 0.65
HMGN1-208ENST00000443046 GRM1Q13255 1194 aa19.11■□□□□ 0.65
HMGN1-208ENST00000443046 PARP10Q53GL7 1025 aa19.11■□□□□ 0.65
HMGN1-208ENST00000443046 NLRP3Q96P20 1036 aa19.11■□□□□ 0.65
HMGN1-208ENST00000443046 CASP8AP2Q9UKL3 1982 aa19.1■□□□□ 0.65
HMGN1-208ENST00000443046 CDHR2Q9BYE9 1310 aa19.1■□□□□ 0.65
HMGN1-208ENST00000443046 CELF2O95319 508 aaKnown RBP19.1■□□□□ 0.65
HMGN1-208ENST00000443046 PPP1R42Q7Z4L9 355 aa19.1■□□□□ 0.65
HMGN1-208ENST00000443046 ZC3H15Q8WU90 426 aaKnown RBP19.1■□□□□ 0.65
HMGN1-208ENST00000443046 PLEKHF1Q96S99 279 aa19.1■□□□□ 0.65
HMGN1-208ENST00000443046 TSKSQ9UJT2 592 aa19.1■□□□□ 0.65
HMGN1-208ENST00000443046 ABCC4O15439 1325 aa19.09■□□□□ 0.65
HMGN1-208ENST00000443046 GMPSP49915 693 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-208ENST00000443046 HIRAP54198 1017 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-208ENST00000443046 BRPF1P55201 1214 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-208ENST00000443046 PDIA6Q15084 440 aa19.09■□□□□ 0.65
HMGN1-208ENST00000443046 SUPT20HQ8NEM7 779 aa19.09■□□□□ 0.65
HMGN1-208ENST00000443046 GLIS2Q9BZE0 524 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-208ENST00000443046 SP8Q8IXZ3 490 aa19.08■□□□□ 0.64
HMGN1-208ENST00000443046 ANKRD36CQ5JPF3 1778 aa19.08■□□□□ 0.64
HMGN1-208ENST00000443046 LAMB2P55268 1798 aa19.07■□□□□ 0.64
HMGN1-208ENST00000443046 BBOX1O75936 387 aa19.07■□□□□ 0.64
HMGN1-208ENST00000443046 KIAA2012Q0VF49 1180 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms