RNA–Protein interactions for RNA: ENST00000442309.5

GCFC2-204, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5

Gene GCFC2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-204ENST00000442309 ZNF316A6NFI3 1004 aaPredicted RBP27.12■■□□□ 1.93
GCFC2-204ENST00000442309 HOXB7P09629 217 aa27.12■■□□□ 1.93
GCFC2-204ENST00000442309 DUSP27Q5VZP5 1158 aa27.12■■□□□ 1.93
GCFC2-204ENST00000442309 DPY19L2Q6NUT2 758 aa27.12■■□□□ 1.93
GCFC2-204ENST00000442309 UTP14AQ9BVJ6 771 aaKnown RBP27.12■■□□□ 1.93
GCFC2-204ENST00000442309 ZNF853P0CG23 659 aa27.1■■□□□ 1.93
GCFC2-204ENST00000442309 VEGFAP15692 232 aaPredicted RBP27.1■■□□□ 1.93
GCFC2-204ENST00000442309 FKBP4Q02790 459 aaKnown RBP eCLIP27.1■■□□□ 1.93
GCFC2-204ENST00000442309 HSP90AB3PQ58FF7 597 aa27.1■■□□□ 1.93
GCFC2-204ENST00000442309 C3orf67Q6ZVT6 689 aa27.1■■□□□ 1.93
GCFC2-204ENST00000442309 IFT57Q9NWB7 429 aa27.1■■□□□ 1.93
GCFC2-204ENST00000442309 CALD1Q05682 793 aaKnown RBP27.09■■□□□ 1.93
GCFC2-204ENST00000442309 RTKN2Q8IZC4 609 aa27.09■■□□□ 1.93
GCFC2-204ENST00000442309 ZNF277Q9NRM2 450 aaPredicted RBP27.09■■□□□ 1.93
GCFC2-204ENST00000442309 GNAI1P63096 354 aa27.08■■□□□ 1.93
GCFC2-204ENST00000442309 RBM17Q96I25 401 aaKnown RBP27.08■■□□□ 1.93
GCFC2-204ENST00000442309 DBF4Q9UBU7 674 aaPredicted RBP27.08■■□□□ 1.93
GCFC2-204ENST00000442309 WDR90Q96KV7 1748 aa27.07■■□□□ 1.92
GCFC2-204ENST00000442309 HOXA10P31260 410 aaPredicted RBP27.07■■□□□ 1.92
GCFC2-204ENST00000442309 APLP1P51693 650 aa27.07■■□□□ 1.92
GCFC2-204ENST00000442309 FSTL1Q12841 308 aa27.07■■□□□ 1.92
GCFC2-204ENST00000442309 TCIRG1Q13488 830 aa27.07■■□□□ 1.92
GCFC2-204ENST00000442309 NLRP10Q86W26 655 aa27.07■■□□□ 1.92
GCFC2-204ENST00000442309 ZNF428Q96B54 188 aa27.07■■□□□ 1.92
GCFC2-204ENST00000442309 NLRP3Q96P20 1036 aa27.07■■□□□ 1.92
GCFC2-204ENST00000442309 ELL2O00472 640 aaPredicted RBP27.06■■□□□ 1.92
GCFC2-204ENST00000442309 TCERG1O14776 1098 aaKnown RBP27.05■■□□□ 1.92
GCFC2-204ENST00000442309 ANP32CO43423 234 aa27.05■■□□□ 1.92
GCFC2-204ENST00000442309 SYNE4Q8N205 404 aa27.05■■□□□ 1.92
GCFC2-204ENST00000442309 POTECB2RU33 542 aa27.04■■□□□ 1.92
GCFC2-204ENST00000442309 DDNO94850 711 aaPredicted RBP27.04■■□□□ 1.92
GCFC2-204ENST00000442309 SLC10A5Q5PT55 438 aa27.04■■□□□ 1.92
GCFC2-204ENST00000442309 SMC1BQ8NDV3 1235 aa27.04■■□□□ 1.92
GCFC2-204ENST00000442309 PLBD2Q8NHP8 589 aa27.04■■□□□ 1.92
GCFC2-204ENST00000442309 CRAMP1Q96RY5 1269 aa27.04■■□□□ 1.92
GCFC2-204ENST00000442309 MRS2Q9HD23 443 aa27.04■■□□□ 1.92
GCFC2-204ENST00000442309 HYPKQ9NX55 129 aa27.04■■□□□ 1.92
GCFC2-204ENST00000442309 TRMT112Q9UI30 125 aaKnown RBP27.04■■□□□ 1.92
GCFC2-204ENST00000442309 PPEF1O14829 653 aaPredicted RBP27.03■■□□□ 1.92
GCFC2-204ENST00000442309 HCLS1P14317 486 aaPredicted RBP27.03■■□□□ 1.92
GCFC2-204ENST00000442309 ANKRD13DQ6ZTN6 518 aa27.03■■□□□ 1.92
GCFC2-204ENST00000442309 SLC51AQ86UW1 340 aa27.03■■□□□ 1.92
GCFC2-204ENST00000442309 LAMB2P55268 1798 aa27.02■■□□□ 1.92
GCFC2-204ENST00000442309 SNED1Q8TER0 1413 aa27.02■■□□□ 1.92
GCFC2-204ENST00000442309 RNF123Q5XPI4 1314 aa27.02■■□□□ 1.92
GCFC2-204ENST00000442309 IARSP41252 1262 aaKnown RBP27.02■■□□□ 1.92
GCFC2-204ENST00000442309 SH3TC1Q8TE82 1336 aa27.01■■□□□ 1.91
GCFC2-204ENST00000442309 CC2D2BQ6DHV5 1058 aa27.01■■□□□ 1.91
GCFC2-204ENST00000442309 ATP5J2-PTCD1G3V325 749 aa27■■□□□ 1.91
GCFC2-204ENST00000442309 C8orf58Q8NAV2 365 aa27■■□□□ 1.91
GCFC2-204ENST00000442309 PSMD1Q99460 953 aa27■■□□□ 1.91
GCFC2-204ENST00000442309 ZNF541Q9H0D2 1346 aa26.99■■□□□ 1.91
GCFC2-204ENST00000442309 ABCC4O15439 1325 aa26.98■■□□□ 1.91
GCFC2-204ENST00000442309 HTRA3P83110 453 aa26.98■■□□□ 1.91
GCFC2-204ENST00000442309 TSR2Q969E8 191 aaKnown RBP26.97■■□□□ 1.91
GCFC2-204ENST00000442309 ISCA1Q9BUE6 129 aa26.97■■□□□ 1.91
GCFC2-204ENST00000442309 PHAXQ9H814 394 aaKnown RBP26.97■■□□□ 1.91
GCFC2-204ENST00000442309 RIC3Q7Z5B4 369 aa26.96■■□□□ 1.91
GCFC2-204ENST00000442309 GOLGA2Q08379 1002 aa26.95■■□□□ 1.9
GCFC2-204ENST00000442309 TSPYL6Q8N831 410 aa26.95■■□□□ 1.9
GCFC2-204ENST00000442309 TMX4Q9H1E5 349 aaPredicted RBP26.95■■□□□ 1.9
GCFC2-204ENST00000442309 DDX60Q8IY21 1712 aaKnown RBP26.94■■□□□ 1.9
GCFC2-204ENST00000442309 CCDC27Q2M243 656 aa26.94■■□□□ 1.9
GCFC2-204ENST00000442309 GRIPAP1Q4V328 841 aa26.94■■□□□ 1.9
GCFC2-204ENST00000442309 RTL5Q5HYW3 569 aaPredicted RBP26.94■■□□□ 1.9
GCFC2-204ENST00000442309 WWC1Q8IX03 1113 aa26.94■■□□□ 1.9
GCFC2-204ENST00000442309 JDP2Q8WYK2 163 aa26.94■■□□□ 1.9
GCFC2-204ENST00000442309 FAM89AQ96GI7 184 aa26.94■■□□□ 1.9
GCFC2-204ENST00000442309 ATP6V0A2Q9Y487 856 aa26.94■■□□□ 1.9
GCFC2-204ENST00000442309 COL4A5P29400 1685 aa26.93■■□□□ 1.9
GCFC2-204ENST00000442309 FZD9O00144 591 aa26.93■■□□□ 1.9
GCFC2-204ENST00000442309 DDX46Q7L014 1031 aaKnown RBP26.93■■□□□ 1.9
GCFC2-204ENST00000442309 TAF1P21675 1872 aa26.93■■□□□ 1.9
GCFC2-204ENST00000442309 IQCA1LA6NCM1 817 aa26.92■■□□□ 1.9
GCFC2-204ENST00000442309 POTEIP0CG38 1075 aa26.92■■□□□ 1.9
GCFC2-204ENST00000442309 POTEJP0CG39 1038 aa26.92■■□□□ 1.9
GCFC2-204ENST00000442309 CCDC30Q5VVM6 783 aa26.92■■□□□ 1.9
GCFC2-204ENST00000442309 LARGE2Q8N3Y3 721 aa26.92■■□□□ 1.9
GCFC2-204ENST00000442309 DNAJC5GQ8N7S2 189 aa26.92■■□□□ 1.9
GCFC2-204ENST00000442309 L3MBTL3Q96JM7 780 aaPredicted RBP26.92■■□□□ 1.9
GCFC2-204ENST00000442309 SCN4AP35499 1836 aa26.91■■□□□ 1.9
GCFC2-204ENST00000442309 SALL2Q9Y467 1007 aaPredicted RBP26.91■■□□□ 1.9
GCFC2-204ENST00000442309 BBOX1O75936 387 aa26.9■■□□□ 1.9
GCFC2-204ENST00000442309 MYD88Q99836 296 aa26.9■■□□□ 1.9
GCFC2-204ENST00000442309 GRAPQ13588 217 aa26.89■■□□□ 1.9
GCFC2-204ENST00000442309 GRAPLQ8TC17 118 aaPredicted RBP26.89■■□□□ 1.9
GCFC2-204ENST00000442309 TAF1DQ9H5J8 278 aaPredicted RBP26.89■■□□□ 1.9
GCFC2-204ENST00000442309 PPIP5K2O43314 1243 aa26.88■■□□□ 1.89
GCFC2-204ENST00000442309 EIF6P56537 245 aaKnown RBP26.88■■□□□ 1.89
GCFC2-204ENST00000442309 TRIM28Q13263 835 aaKnown RBP26.88■■□□□ 1.89
GCFC2-204ENST00000442309 CHADLQ6NUI6 762 aa26.88■■□□□ 1.89
GCFC2-204ENST00000442309 CHMP4AQ9BY43 222 aa26.88■■□□□ 1.89
GCFC2-204ENST00000442309 GJA3Q9Y6H8 435 aa26.88■■□□□ 1.89
GCFC2-204ENST00000442309 AOC3Q16853 763 aa26.87■■□□□ 1.89
GCFC2-204ENST00000442309 SP8Q8IXZ3 490 aa26.87■■□□□ 1.89
GCFC2-204ENST00000442309 HACL1Q9UJ83 578 aa26.87■■□□□ 1.89
GCFC2-204ENST00000442309 IRS4O14654 1257 aaPredicted RBP26.86■■□□□ 1.89
GCFC2-204ENST00000442309 DDX58O95786 925 aaKnown RBP26.86■■□□□ 1.89
GCFC2-204ENST00000442309 EAPPQ56P03 285 aaPredicted RBP26.86■■□□□ 1.89
GCFC2-204ENST00000442309 DPP8Q6V1X1 898 aaPredicted RBP26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms