RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 CALD1Q05682 793 aaKnown RBP21.59■■□□□ 1.05
IRF3-204ENST00000442265 HSP90AB3PQ58FF7 597 aa21.59■■□□□ 1.05
IRF3-204ENST00000442265 IFT57Q9NWB7 429 aa21.59■■□□□ 1.05
IRF3-204ENST00000442265 DICER1Q9UPY3 1922 aaKnown RBP21.59■■□□□ 1.05
IRF3-204ENST00000442265 POTECB2RU33 542 aa21.58■■□□□ 1.05
IRF3-204ENST00000442265 HDGFL1Q5TGJ6 251 aa21.58■■□□□ 1.05
IRF3-204ENST00000442265 CC2D2BQ6DHV5 1058 aa21.58■■□□□ 1.05
IRF3-204ENST00000442265 NECTIN2Q92692 538 aa21.58■■□□□ 1.05
IRF3-204ENST00000442265 CRAMP1Q96RY5 1269 aa21.58■■□□□ 1.05
IRF3-204ENST00000442265 MBIPQ9NS73 344 aa21.58■■□□□ 1.05
IRF3-204ENST00000442265 DBF4Q9UBU7 674 aaPredicted RBP21.58■■□□□ 1.05
IRF3-204ENST00000442265 CCDC88AQ3V6T2 1871 aa21.58■■□□□ 1.04
IRF3-204ENST00000442265 TCIRG1Q13488 830 aa21.57■■□□□ 1.04
IRF3-204ENST00000442265 UTP14AQ9BVJ6 771 aaKnown RBP21.57■■□□□ 1.04
IRF3-204ENST00000442265 CHPF2Q9P2E5 772 aa21.57■■□□□ 1.04
IRF3-204ENST00000442265 WDR90Q96KV7 1748 aa21.57■■□□□ 1.04
IRF3-204ENST00000442265 GNAI1P63096 354 aa21.56■■□□□ 1.04
IRF3-204ENST00000442265 GRIPAP1Q4V328 841 aa21.56■■□□□ 1.04
IRF3-204ENST00000442265 DUSP27Q5VZP5 1158 aa21.56■■□□□ 1.04
IRF3-204ENST00000442265 NLRP10Q86W26 655 aa21.56■■□□□ 1.04
IRF3-204ENST00000442265 RPGRQ92834 1020 aaKnown RBP21.56■■□□□ 1.04
IRF3-204ENST00000442265 PSMD1Q99460 953 aa21.56■■□□□ 1.04
IRF3-204ENST00000442265 AIMP1Q12904 312 aaKnown RBP21.55■■□□□ 1.04
IRF3-204ENST00000442265 OLFM4Q6UX06 510 aa21.55■■□□□ 1.04
IRF3-204ENST00000442265 SMC1BQ8NDV3 1235 aa21.55■■□□□ 1.04
IRF3-204ENST00000442265 CACNA1SQ13698 1873 aa21.55■■□□□ 1.04
IRF3-204ENST00000442265 CCDC184Q52MB2 194 aa21.54■■□□□ 1.04
IRF3-204ENST00000442265 C3orf67Q6ZVT6 689 aa21.54■■□□□ 1.04
IRF3-204ENST00000442265 PLBD2Q8NHP8 589 aa21.54■■□□□ 1.04
IRF3-204ENST00000442265 RBM17Q96I25 401 aaKnown RBP21.54■■□□□ 1.04
IRF3-204ENST00000442265 NLRP3Q96P20 1036 aa21.54■■□□□ 1.04
IRF3-204ENST00000442265 HYPKQ9NX55 129 aa21.54■■□□□ 1.04
IRF3-204ENST00000442265 ZNF316A6NFI3 1004 aaPredicted RBP21.53■■□□□ 1.04
IRF3-204ENST00000442265 NCBP3Q53F19 620 aaKnown RBP21.53■■□□□ 1.04
IRF3-204ENST00000442265 ANKRD13DQ6ZTN6 518 aa21.53■■□□□ 1.04
IRF3-204ENST00000442265 DNAJC5GQ8N7S2 189 aa21.53■■□□□ 1.04
IRF3-204ENST00000442265 CCDC27Q2M243 656 aa21.52■■□□□ 1.04
IRF3-204ENST00000442265 L3MBTL3Q96JM7 780 aaPredicted RBP21.52■■□□□ 1.04
IRF3-204ENST00000442265 ZNF277Q9NRM2 450 aaPredicted RBP21.52■■□□□ 1.04
IRF3-204ENST00000442265 SYNE4Q8N205 404 aa21.51■■□□□ 1.03
IRF3-204ENST00000442265 ANKRD36CQ5JPF3 1778 aa21.51■■□□□ 1.03
IRF3-204ENST00000442265 DDNO94850 711 aaPredicted RBP21.5■■□□□ 1.03
IRF3-204ENST00000442265 IARSP41252 1262 aaKnown RBP21.5■■□□□ 1.03
IRF3-204ENST00000442265 TRIM28Q13263 835 aaKnown RBP21.5■■□□□ 1.03
IRF3-204ENST00000442265 ISCA1Q9BUE6 129 aa21.5■■□□□ 1.03
IRF3-204ENST00000442265 FZD9O00144 591 aa21.49■■□□□ 1.03
IRF3-204ENST00000442265 CHMP4AQ9BY43 222 aa21.49■■□□□ 1.03
IRF3-204ENST00000442265 TRMT112Q9UI30 125 aaKnown RBP21.49■■□□□ 1.03
IRF3-204ENST00000442265 SH3TC1Q8TE82 1336 aa21.49■■□□□ 1.03
IRF3-204ENST00000442265 PPEF1O14829 653 aaPredicted RBP21.48■■□□□ 1.03
IRF3-204ENST00000442265 C8orf58Q8NAV2 365 aa21.47■■□□□ 1.03
IRF3-204ENST00000442265 ATP6V0A2Q9Y487 856 aa21.47■■□□□ 1.03
IRF3-204ENST00000442265 PCNTO95613 3336 aa21.47■■□□□ 1.03
IRF3-204ENST00000442265 IQCA1LA6NCM1 817 aa21.46■■□□□ 1.03
IRF3-204ENST00000442265 BBOX1O75936 387 aa21.46■■□□□ 1.03
IRF3-204ENST00000442265 HCLS1P14317 486 aaPredicted RBP21.46■■□□□ 1.03
IRF3-204ENST00000442265 VPS33BQ9H267 617 aa21.46■■□□□ 1.03
IRF3-204ENST00000442265 ABCC4O15439 1325 aa21.46■■□□□ 1.03
IRF3-204ENST00000442265 WWC1Q8IX03 1113 aa21.45■■□□□ 1.02
IRF3-204ENST00000442265 ZNF541Q9H0D2 1346 aa21.45■■□□□ 1.02
IRF3-204ENST00000442265 ANP32CO43423 234 aa21.44■■□□□ 1.02
IRF3-204ENST00000442265 JDP2Q8WYK2 163 aa21.44■■□□□ 1.02
IRF3-204ENST00000442265 RTFDC1Q9BY42 306 aaPredicted RBP21.44■■□□□ 1.02
IRF3-204ENST00000442265 IL16Q14005 1332 aa21.44■■□□□ 1.02
IRF3-204ENST00000442265 ELL2O00472 640 aaPredicted RBP21.43■■□□□ 1.02
IRF3-204ENST00000442265 SP8Q8IXZ3 490 aa21.43■■□□□ 1.02
IRF3-204ENST00000442265 GPC2Q8N158 579 aa21.43■■□□□ 1.02
IRF3-204ENST00000442265 TAF1DQ9H5J8 278 aaPredicted RBP21.43■■□□□ 1.02
IRF3-204ENST00000442265 COL4A5P29400 1685 aa21.42■■□□□ 1.02
IRF3-204ENST00000442265 GOLGA2Q08379 1002 aa21.42■■□□□ 1.02
IRF3-204ENST00000442265 SF3B3Q15393 1217 aaKnown RBP21.42■■□□□ 1.02
IRF3-204ENST00000442265 CCDC30Q5VVM6 783 aa21.42■■□□□ 1.02
IRF3-204ENST00000442265 CHADLQ6NUI6 762 aa21.42■■□□□ 1.02
IRF3-204ENST00000442265 DDX46Q7L014 1031 aaKnown RBP21.42■■□□□ 1.02
IRF3-204ENST00000442265 SLC51AQ86UW1 340 aa21.42■■□□□ 1.02
IRF3-204ENST00000442265 TMX4Q9H1E5 349 aaPredicted RBP21.42■■□□□ 1.02
IRF3-204ENST00000442265 PHAXQ9H814 394 aaKnown RBP21.42■■□□□ 1.02
IRF3-204ENST00000442265 MRS2Q9HD23 443 aa21.42■■□□□ 1.02
IRF3-204ENST00000442265 SCN4AP35499 1836 aa21.41■■□□□ 1.02
IRF3-204ENST00000442265 ATP5J2-PTCD1G3V325 749 aa21.41■■□□□ 1.02
IRF3-204ENST00000442265 GRAPQ13588 217 aa21.41■■□□□ 1.02
IRF3-204ENST00000442265 TMC4Q7Z404 712 aa21.41■■□□□ 1.02
IRF3-204ENST00000442265 GRAPLQ8TC17 118 aaPredicted RBP21.41■■□□□ 1.02
IRF3-204ENST00000442265 KLRG1Q96E93 195 aa21.41■■□□□ 1.02
IRF3-204ENST00000442265 FAM89AQ96GI7 184 aa21.41■■□□□ 1.02
IRF3-204ENST00000442265 RIC3Q7Z5B4 369 aa21.4■■□□□ 1.02
IRF3-204ENST00000442265 TSPYL6Q8N831 410 aa21.4■■□□□ 1.02
IRF3-204ENST00000442265 LAMB2P55268 1798 aa21.4■■□□□ 1.02
IRF3-204ENST00000442265 TCERG1O14776 1098 aaKnown RBP21.39■■□□□ 1.01
IRF3-204ENST00000442265 POTEIP0CG38 1075 aa21.39■■□□□ 1.01
IRF3-204ENST00000442265 POTEJP0CG39 1038 aa21.39■■□□□ 1.01
IRF3-204ENST00000442265 HTRA3P83110 453 aa21.39■■□□□ 1.01
IRF3-204ENST00000442265 LDHDQ86WU2 507 aa21.39■■□□□ 1.01
IRF3-204ENST00000442265 LARGE2Q8N3Y3 721 aa21.39■■□□□ 1.01
IRF3-204ENST00000442265 JMYQ8N9B5 988 aa21.39■■□□□ 1.01
IRF3-204ENST00000442265 SUPT20HQ8NEM7 779 aa21.39■■□□□ 1.01
IRF3-204ENST00000442265 TSR2Q969E8 191 aaKnown RBP21.39■■□□□ 1.01
IRF3-204ENST00000442265 HACL1Q9UJ83 578 aa21.39■■□□□ 1.01
IRF3-204ENST00000442265 EIF6P56537 245 aaKnown RBP21.38■■□□□ 1.01
IRF3-204ENST00000442265 ZBTB38Q8NAP3 1195 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms