RNA–Protein interactions for RNA: ENST00000441867.5

ABCF1-203, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 5

Gene ABCF1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-203ENST00000441867 OLFM4Q6UX06 510 aa12.4□□□□□ -0.42
ABCF1-203ENST00000441867 SAPCD2Q86UD0 394 aa12.4□□□□□ -0.42
ABCF1-203ENST00000441867 IL17REQ8NFR9 667 aa12.4□□□□□ -0.42
ABCF1-203ENST00000441867 NIP7Q9Y221 180 aaKnown RBP eCLIP12.4□□□□□ -0.42
ABCF1-203ENST00000441867 SCN7AQ01118 1682 aa12.4□□□□□ -0.42
ABCF1-203ENST00000441867 TRAF5O00463 557 aa12.39□□□□□ -0.43
ABCF1-203ENST00000441867 AOC2O75106 756 aa12.39□□□□□ -0.43
ABCF1-203ENST00000441867 EPS15P42566 896 aa12.39□□□□□ -0.43
ABCF1-203ENST00000441867 SCNN1DP51172 638 aa12.39□□□□□ -0.43
ABCF1-203ENST00000441867 LARGE2Q8N3Y3 721 aa12.39□□□□□ -0.43
ABCF1-203ENST00000441867 THSD7BQ9C0I4 1608 aa12.38□□□□□ -0.43
ABCF1-203ENST00000441867 SOX10P56693 466 aa12.38□□□□□ -0.43
ABCF1-203ENST00000441867 FMR1Q06787 632 aaKnown RBP eCLIP12.38□□□□□ -0.432e-6■■■□□ 16.8
ABCF1-203ENST00000441867 ADARB2Q9NS39 739 aaKnown RBP12.38□□□□□ -0.43
ABCF1-203ENST00000441867 BTBD11A6QL63 1104 aa12.37□□□□□ -0.43
ABCF1-203ENST00000441867 CELF2O95319 508 aaKnown RBP12.37□□□□□ -0.43
ABCF1-203ENST00000441867 NOGQ13253 232 aa12.37□□□□□ -0.43
ABCF1-203ENST00000441867 CRY2Q49AN0 593 aa12.37□□□□□ -0.43
ABCF1-203ENST00000441867 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
ABCF1-203ENST00000441867 UBR2Q8IWV8 1755 aa12.37□□□□□ -0.43
ABCF1-203ENST00000441867 ARFGEF2Q9Y6D5 1785 aa12.36□□□□□ -0.43
ABCF1-203ENST00000441867 SNRPA1P09661 255 aaKnown RBP12.36□□□□□ -0.43
ABCF1-203ENST00000441867 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
ABCF1-203ENST00000441867 NIM1KQ8IY84 436 aa12.36□□□□□ -0.43
ABCF1-203ENST00000441867 ZC3H15Q8WU90 426 aaKnown RBP12.36□□□□□ -0.43
ABCF1-203ENST00000441867 TMX4Q9H1E5 349 aaPredicted RBP12.36□□□□□ -0.43
ABCF1-203ENST00000441867 VPS33BQ9H267 617 aa12.36□□□□□ -0.43
ABCF1-203ENST00000441867 GPRC5DQ9NZD1 345 aa12.36□□□□□ -0.43
ABCF1-203ENST00000441867 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
ABCF1-203ENST00000441867 CASP8AP2Q9UKL3 1982 aa12.36□□□□□ -0.43
ABCF1-203ENST00000441867 FAM177BA6PVY3 158 aa12.35□□□□□ -0.43
ABCF1-203ENST00000441867 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-203ENST00000441867 AMER1Q5JTC6 1135 aaPredicted RBP12.35□□□□□ -0.43
ABCF1-203ENST00000441867 CIAPIN1Q6FI81 312 aa12.35□□□□□ -0.43
ABCF1-203ENST00000441867 RPGRQ92834 1020 aaKnown RBP12.35□□□□□ -0.43
ABCF1-203ENST00000441867 PGAP2Q9UHJ9 254 aa12.35□□□□□ -0.43
ABCF1-203ENST00000441867 SNED1Q8TER0 1413 aa12.35□□□□□ -0.43
ABCF1-203ENST00000441867 CEMIPQ8WUJ3 1361 aa12.34□□□□□ -0.43
ABCF1-203ENST00000441867 KCNQ3O43525 872 aa12.33□□□□□ -0.44
ABCF1-203ENST00000441867 PIP4K2AP48426 406 aaPredicted RBP12.33□□□□□ -0.44
ABCF1-203ENST00000441867 CDC37L1Q7L3B6 337 aa12.33□□□□□ -0.44
ABCF1-203ENST00000441867 RBM17Q96I25 401 aaKnown RBP12.33□□□□□ -0.44
ABCF1-203ENST00000441867 CRAMP1Q96RY5 1269 aa12.33□□□□□ -0.44
ABCF1-203ENST00000441867 SAGE1Q9NXZ1 904 aa12.33□□□□□ -0.44
ABCF1-203ENST00000441867 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
ABCF1-203ENST00000441867 KIF7Q2M1P5 1343 aa12.33□□□□□ -0.44
ABCF1-203ENST00000441867 CDHR2Q9BYE9 1310 aa12.33□□□□□ -0.44
ABCF1-203ENST00000441867 U2SURPO15042 1029 aaKnown RBP12.32□□□□□ -0.44
ABCF1-203ENST00000441867 PPIP5K2O43314 1243 aa12.32□□□□□ -0.44
ABCF1-203ENST00000441867 SUPT20HQ8NEM7 779 aa12.32□□□□□ -0.44
ABCF1-203ENST00000441867 GLIS2Q9BZE0 524 aaPredicted RBP12.32□□□□□ -0.44
ABCF1-203ENST00000441867 LTBP1Q14766 1721 aa12.31□□□□□ -0.44
ABCF1-203ENST00000441867 NBPF26B4DH59 902 aa12.31□□□□□ -0.44
ABCF1-203ENST00000441867 ERVV-1B6SEH8 477 aa12.31□□□□□ -0.44
ABCF1-203ENST00000441867 HLFQ16534 295 aa12.31□□□□□ -0.44
ABCF1-203ENST00000441867 NBPF10Q6P3W6 841 aaKnown RBP12.31□□□□□ -0.44
ABCF1-203ENST00000441867 NBPF15Q8N660 670 aa12.31□□□□□ -0.44
ABCF1-203ENST00000441867 ZNF408Q9H9D4 720 aa12.31□□□□□ -0.44
ABCF1-203ENST00000441867 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
ABCF1-203ENST00000441867 PPEF1O14829 653 aaPredicted RBP12.3□□□□□ -0.44
ABCF1-203ENST00000441867 GMPSP49915 693 aaPredicted RBP12.3□□□□□ -0.44
ABCF1-203ENST00000441867 HUNKP57058 714 aa12.3□□□□□ -0.44
ABCF1-203ENST00000441867 CXCL9Q07325 125 aa12.3□□□□□ -0.44
ABCF1-203ENST00000441867 TNIP1Q15025 636 aa12.3□□□□□ -0.44
ABCF1-203ENST00000441867 RTF1Q92541 710 aaKnown RBP12.3□□□□□ -0.44
ABCF1-203ENST00000441867 CCDC102AQ96A19 550 aa12.3□□□□□ -0.44
ABCF1-203ENST00000441867 RIC1Q4ADV7 1423 aa12.29□□□□□ -0.44
ABCF1-203ENST00000441867 BCORQ6W2J9 1755 aa12.29□□□□□ -0.44
ABCF1-203ENST00000441867 PRAMEF22A3QJZ6 481 aa12.29□□□□□ -0.44
ABCF1-203ENST00000441867 AOC3Q16853 763 aa12.29□□□□□ -0.44
ABCF1-203ENST00000441867 NUTM1Q86Y26 1132 aa12.29□□□□□ -0.44
ABCF1-203ENST00000441867 BCL2L13Q9BXK5 485 aa12.29□□□□□ -0.44
ABCF1-203ENST00000441867 ABCC12Q96J65 1359 aa12.29□□□□□ -0.44
ABCF1-203ENST00000441867 IBTKQ9P2D0 1353 aaPredicted RBP12.29□□□□□ -0.44
ABCF1-203ENST00000441867 COL4A5P29400 1685 aa12.29□□□□□ -0.44
ABCF1-203ENST00000441867 CACNA1SQ13698 1873 aa12.28□□□□□ -0.44
ABCF1-203ENST00000441867 H7C1D1 291 aa12.28□□□□□ -0.44
ABCF1-203ENST00000441867 RGMBQ6NW40 437 aa12.28□□□□□ -0.44
ABCF1-203ENST00000441867 KIF6Q6ZMV9 814 aa12.28□□□□□ -0.44
ABCF1-203ENST00000441867 RTFDC1Q9BY42 306 aaPredicted RBP12.28□□□□□ -0.44
ABCF1-203ENST00000441867 ATP6V0A2Q9Y487 856 aa12.28□□□□□ -0.44
ABCF1-203ENST00000441867 TCERG1O14776 1098 aaKnown RBP12.27□□□□□ -0.45
ABCF1-203ENST00000441867 HABP4Q5JVS0 413 aaKnown RBP12.27□□□□□ -0.45
ABCF1-203ENST00000441867 CTU1Q7Z7A3 348 aaKnown RBP12.27□□□□□ -0.45
ABCF1-203ENST00000441867 REM2Q8IYK8 340 aaPredicted RBP12.27□□□□□ -0.45
ABCF1-203ENST00000441867 GCC1Q96CN9 775 aa12.27□□□□□ -0.45
ABCF1-203ENST00000441867 NLRP3Q96P20 1036 aa12.27□□□□□ -0.45
ABCF1-203ENST00000441867 TRPM7Q96QT4 1865 aa12.26□□□□□ -0.45
ABCF1-203ENST00000441867 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
ABCF1-203ENST00000441867 BBOX1O75936 387 aa12.26□□□□□ -0.45
ABCF1-203ENST00000441867 HIRAP54198 1017 aaPredicted RBP12.26□□□□□ -0.45
ABCF1-203ENST00000441867 DPP8Q6V1X1 898 aaPredicted RBP12.26□□□□□ -0.45
ABCF1-203ENST00000441867 USP48Q86UV5 1035 aa12.26□□□□□ -0.45
ABCF1-203ENST00000441867 C2orf69Q8N8R5 385 aa12.26□□□□□ -0.45
ABCF1-203ENST00000441867 PHACTR3Q96KR7 559 aa12.26□□□□□ -0.45
ABCF1-203ENST00000441867 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
ABCF1-203ENST00000441867 RNF186Q9NXI6 227 aa12.26□□□□□ -0.45
ABCF1-203ENST00000441867 CNOT7Q9UIV1 285 aaKnown RBP12.26□□□□□ -0.45
ABCF1-203ENST00000441867 MAP3K15Q6ZN16 1313 aa12.26□□□□□ -0.45
ABCF1-203ENST00000441867 TRPA1O75762 1119 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms