RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 SELPP16109 830 aa6.84□□□□□ -1.31
HMGB3P9-201ENST00000441799 HIRAP54198 1017 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P9-201ENST00000441799 TYRO3Q06418 890 aa6.84□□□□□ -1.31
HMGB3P9-201ENST00000441799 PRSS36Q5K4E3 855 aa6.84□□□□□ -1.31
HMGB3P9-201ENST00000441799 ILDR2Q71H61 639 aa6.84□□□□□ -1.31
HMGB3P9-201ENST00000441799 TPCN2Q8NHX9 752 aa6.84□□□□□ -1.31
HMGB3P9-201ENST00000441799 ADAMTS19Q8TE59 1207 aa6.84□□□□□ -1.31
HMGB3P9-201ENST00000441799 CEP63Q96MT8 703 aa6.84□□□□□ -1.31
HMGB3P9-201ENST00000441799 KCNH4Q9UQ05 1017 aa6.84□□□□□ -1.31
HMGB3P9-201ENST00000441799 IGSF3O75054 1194 aa6.83□□□□□ -1.32
HMGB3P9-201ENST00000441799 PSMA6P60900 246 aaKnown RBP6.83□□□□□ -1.32
HMGB3P9-201ENST00000441799 ARTNQ5T4W7 220 aa6.83□□□□□ -1.32
HMGB3P9-201ENST00000441799 CCDC102BQ68D86 513 aa6.83□□□□□ -1.32
HMGB3P9-201ENST00000441799 POM121Q96HA1 1249 aa6.83□□□□□ -1.32
HMGB3P9-201ENST00000441799 SUSD3Q96L08 255 aa6.83□□□□□ -1.32
HMGB3P9-201ENST00000441799 NACC1Q96RE7 527 aa6.83□□□□□ -1.32
HMGB3P9-201ENST00000441799 PHACTR1Q9C0D0 580 aa6.83□□□□□ -1.32
HMGB3P9-201ENST00000441799 SCO2A0A1W2PP80 73 aa6.82□□□□□ -1.32
HMGB3P9-201ENST00000441799 C21orf2O43822 256 aa6.82□□□□□ -1.32
HMGB3P9-201ENST00000441799 ADGRE1Q14246 886 aa6.82□□□□□ -1.32
HMGB3P9-201ENST00000441799 TRAPPC3LQ5T215 181 aa6.82□□□□□ -1.32
HMGB3P9-201ENST00000441799 ERICH6BQ5W0A0 696 aa6.82□□□□□ -1.32
HMGB3P9-201ENST00000441799 ANKIB1Q9P2G1 1089 aa6.82□□□□□ -1.32
HMGB3P9-201ENST00000441799 A0A0A0MRY4 1105 aa6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 POM121CA8CG34 1229 aa6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 LILRB5O75023 590 aa6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 DKK1O94907 266 aa6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 NEUROD1Q13562 356 aa6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 MBTPS1Q14703 1052 aa6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 TRIM50Q86XT4 487 aa6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 PLEKHM2Q8IWE5 1019 aa6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 BHMTQ93088 406 aa6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 ZFP64Q9NPA5 681 aa6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 CCDC9Q9Y3X0 531 aaKnown RBP6.81□□□□□ -1.32
HMGB3P9-201ENST00000441799 C9orf172C9J069 976 aa6.8□□□□□ -1.32
HMGB3P9-201ENST00000441799 H2AFB1P0C5Y9 115 aa6.8□□□□□ -1.32
HMGB3P9-201ENST00000441799 H2AFB2P0C5Z0 115 aa6.8□□□□□ -1.32
HMGB3P9-201ENST00000441799 SHISA2Q6UWI4 295 aa6.8□□□□□ -1.32
HMGB3P9-201ENST00000441799 UCN2Q96RP3 112 aa6.8□□□□□ -1.32
HMGB3P9-201ENST00000441799 USP17L3A6NCW0 530 aa6.79□□□□□ -1.32
HMGB3P9-201ENST00000441799 USP17L4A6NCW7 530 aa6.79□□□□□ -1.32
HMGB3P9-201ENST00000441799 M0R2N6 131 aa6.79□□□□□ -1.32
HMGB3P9-201ENST00000441799 USP17L2Q6R6M4 530 aa6.79□□□□□ -1.32
HMGB3P9-201ENST00000441799 USP17L1Q7RTZ2 530 aa6.79□□□□□ -1.32
HMGB3P9-201ENST00000441799 TSEN2Q8NCE0 465 aaKnown RBP6.79□□□□□ -1.32
HMGB3P9-201ENST00000441799 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P9-201ENST00000441799 SLC6A14Q9UN76 642 aa6.79□□□□□ -1.32
HMGB3P9-201ENST00000441799 ELNP15502 786 aa6.78□□□□□ -1.32
HMGB3P9-201ENST00000441799 AAMPQ13685 434 aa6.78□□□□□ -1.32
HMGB3P9-201ENST00000441799 BTLAQ7Z6A9 289 aa6.78□□□□□ -1.32
HMGB3P9-201ENST00000441799 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
HMGB3P9-201ENST00000441799 ALDH16A1Q8IZ83 802 aa6.78□□□□□ -1.32
HMGB3P9-201ENST00000441799 LARGE2Q8N3Y3 721 aa6.78□□□□□ -1.32
HMGB3P9-201ENST00000441799 OGFOD1Q8N543 542 aa6.78□□□□□ -1.32
HMGB3P9-201ENST00000441799 NUDT8Q8WV74 236 aa6.78□□□□□ -1.32
HMGB3P9-201ENST00000441799 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
HMGB3P9-201ENST00000441799 IGFLR1Q9H665 355 aa6.78□□□□□ -1.32
HMGB3P9-201ENST00000441799 PPP1R12BO60237 982 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P9-201ENST00000441799 ATP1A2P50993 1020 aa6.77□□□□□ -1.33
HMGB3P9-201ENST00000441799 AFF1P51825 1210 aaKnown RBP6.77□□□□□ -1.33
HMGB3P9-201ENST00000441799 TXNRD3Q86VQ6 643 aa6.77□□□□□ -1.33
HMGB3P9-201ENST00000441799 KRTAP4-12Q9BQ66 201 aa6.77□□□□□ -1.33
HMGB3P9-201ENST00000441799 GSX2Q9BZM3 304 aa6.77□□□□□ -1.33
HMGB3P9-201ENST00000441799 UBE2OQ9C0C9 1292 aaKnown RBP6.77□□□□□ -1.33
HMGB3P9-201ENST00000441799 JPH1Q9HDC5 661 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P9-201ENST00000441799 MKRN1Q9UHC7 482 aaKnown RBP6.77□□□□□ -1.33
HMGB3P9-201ENST00000441799 NAGPAQ9UK23 515 aa6.77□□□□□ -1.33
HMGB3P9-201ENST00000441799 PALM3A6NDB9 673 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P9-201ENST00000441799 GRNP28799 593 aaKnown RBP6.76□□□□□ -1.33
HMGB3P9-201ENST00000441799 TBC1D8BQ0IIM8 1120 aa6.76□□□□□ -1.33
HMGB3P9-201ENST00000441799 HDGFL1Q5TGJ6 251 aa6.76□□□□□ -1.33
HMGB3P9-201ENST00000441799 SIX5Q8N196 739 aa6.76□□□□□ -1.33
HMGB3P9-201ENST00000441799 C2orf49Q9BVC5 232 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P9-201ENST00000441799 DNAJB12Q9NXW2 375 aaKnown RBP6.76□□□□□ -1.33
HMGB3P9-201ENST00000441799 DMGDHQ9UI17 866 aaKnown RBP6.76□□□□□ -1.33
HMGB3P9-201ENST00000441799 ATAD2Q6PL18 1390 aa6.76□□□□□ -1.33
HMGB3P9-201ENST00000441799 HYAL3O43820 417 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P9-201ENST00000441799 ATP9BO43861 1147 aa6.75□□□□□ -1.33
HMGB3P9-201ENST00000441799 PSAPL1Q6NUJ1 521 aa6.75□□□□□ -1.33
HMGB3P9-201ENST00000441799 DMRTC2Q8IXT2 367 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P9-201ENST00000441799 STAG2Q8N3U4 1231 aa6.75□□□□□ -1.33
HMGB3P9-201ENST00000441799 BCS1LQ9Y276 419 aa6.75□□□□□ -1.33
HMGB3P9-201ENST00000441799 CHMP3Q9Y3E7 222 aa6.75□□□□□ -1.33
HMGB3P9-201ENST00000441799 RAC1P63000 192 aa6.74□□□□□ -1.33
HMGB3P9-201ENST00000441799 NRG1Q02297 640 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P9-201ENST00000441799 FMR1NBQ8N0W7 255 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P9-201ENST00000441799 ZNF594Q96JF6 807 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P9-201ENST00000441799 EFCC1Q9HA90 598 aa6.74□□□□□ -1.33
HMGB3P9-201ENST00000441799 PLAURQ03405 335 aa6.73□□□□□ -1.33
HMGB3P9-201ENST00000441799 LRP8Q14114 963 aa6.73□□□□□ -1.33
HMGB3P9-201ENST00000441799 GRIK5Q16478 980 aa6.73□□□□□ -1.33
HMGB3P9-201ENST00000441799 WWC1Q8IX03 1113 aa6.73□□□□□ -1.33
HMGB3P9-201ENST00000441799 SCG3Q8WXD2 468 aaKnown RBP6.73□□□□□ -1.33
HMGB3P9-201ENST00000441799 TP53INP1Q96A56 240 aa6.73□□□□□ -1.33
HMGB3P9-201ENST00000441799 ARID3AQ99856 593 aa6.73□□□□□ -1.33
HMGB3P9-201ENST00000441799 CLSPNQ9HAW4 1339 aa6.73□□□□□ -1.33
HMGB3P9-201ENST00000441799 ZBTB42B2RXF5 422 aa6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 NFKB1P19838 968 aa6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 ZEB1P37275 1124 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P9-201ENST00000441799 CCINQ13939 588 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms