RNA–Protein interactions for RNA: ENST00000441460.5

RFTN1-204, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-204ENST00000441460 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
RFTN1-204ENST00000441460 ANKRD13DQ6ZTN6 518 aa17.51■□□□□ 0.39
RFTN1-204ENST00000441460 PPP1R42Q7Z4L9 355 aa17.51■□□□□ 0.39
RFTN1-204ENST00000441460 UTP14AQ9BVJ6 771 aaKnown RBP17.51■□□□□ 0.39
RFTN1-204ENST00000441460 HYPKQ9NX55 129 aa17.51■□□□□ 0.39
RFTN1-204ENST00000441460 HSP90AB3PQ58FF7 597 aa17.5■□□□□ 0.39
RFTN1-204ENST00000441460 SYNE4Q8N205 404 aa17.5■□□□□ 0.39
RFTN1-204ENST00000441460 PLBD2Q8NHP8 589 aa17.5■□□□□ 0.39
RFTN1-204ENST00000441460 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
RFTN1-204ENST00000441460 PHAXQ9H814 394 aaKnown RBP17.5■□□□□ 0.39
RFTN1-204ENST00000441460 LTBP3Q9NS15 1303 aa17.49■□□□□ 0.39
RFTN1-204ENST00000441460 HOXA10P31260 410 aaPredicted RBP17.49■□□□□ 0.39
RFTN1-204ENST00000441460 SLC10A5Q5PT55 438 aa17.49■□□□□ 0.39
RFTN1-204ENST00000441460 SLC51AQ86UW1 340 aa17.49■□□□□ 0.39
RFTN1-204ENST00000441460 FAM9BQ8IZU0 186 aa17.49■□□□□ 0.39
RFTN1-204ENST00000441460 TAOK3Q9H2K8 898 aa17.49■□□□□ 0.39
RFTN1-204ENST00000441460 SALL2Q9Y467 1007 aaPredicted RBP17.49■□□□□ 0.39
RFTN1-204ENST00000441460 CCDC88AQ3V6T2 1871 aa17.49■□□□□ 0.39
RFTN1-204ENST00000441460 IL16Q14005 1332 aa17.48■□□□□ 0.39
RFTN1-204ENST00000441460 ZC3H4Q9UPT8 1303 aaKnown RBP17.48■□□□□ 0.39
RFTN1-204ENST00000441460 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
RFTN1-204ENST00000441460 ALDH1B1P30837 517 aa17.48■□□□□ 0.39
RFTN1-204ENST00000441460 SOGA3Q5TF21 947 aa17.48■□□□□ 0.39
RFTN1-204ENST00000441460 ISCA1Q9BUE6 129 aa17.48■□□□□ 0.39
RFTN1-204ENST00000441460 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
RFTN1-204ENST00000441460 CCDC93Q567U6 631 aa17.47■□□□□ 0.39
RFTN1-204ENST00000441460 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
RFTN1-204ENST00000441460 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
RFTN1-204ENST00000441460 HCLS1P14317 486 aaPredicted RBP17.46■□□□□ 0.39
RFTN1-204ENST00000441460 RPGRQ92834 1020 aaKnown RBP17.46■□□□□ 0.39
RFTN1-204ENST00000441460 SPINK5Q9NQ38 1064 aaPredicted RBP17.46■□□□□ 0.39
RFTN1-204ENST00000441460 TRMT112Q9UI30 125 aaKnown RBP17.46■□□□□ 0.39
RFTN1-204ENST00000441460 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.38
RFTN1-204ENST00000441460 CCDC30Q5VVM6 783 aa17.45■□□□□ 0.38
RFTN1-204ENST00000441460 NLRP3Q96P20 1036 aa17.45■□□□□ 0.38
RFTN1-204ENST00000441460 CRAMP1Q96RY5 1269 aa17.45■□□□□ 0.38
RFTN1-204ENST00000441460 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
RFTN1-204ENST00000441460 SH3TC1Q8TE82 1336 aa17.45■□□□□ 0.38
RFTN1-204ENST00000441460 GLTPD2A6NH11 291 aa17.44■□□□□ 0.38
RFTN1-204ENST00000441460 TCERG1O14776 1098 aaKnown RBP17.44■□□□□ 0.38
RFTN1-204ENST00000441460 FKBP4Q02790 459 aaKnown RBP eCLIP17.44■□□□□ 0.38
RFTN1-204ENST00000441460 TWISTNBQ3B726 338 aaPredicted RBP17.44■□□□□ 0.38
RFTN1-204ENST00000441460 WDR63Q8IWG1 891 aa17.44■□□□□ 0.38
RFTN1-204ENST00000441460 RBM17Q96I25 401 aaKnown RBP17.44■□□□□ 0.38
RFTN1-204ENST00000441460 RRAGCQ9HB90 399 aa17.44■□□□□ 0.38
RFTN1-204ENST00000441460 DICER1Q9UPY3 1922 aaKnown RBP17.44■□□□□ 0.38
RFTN1-204ENST00000441460 GOLGA2Q08379 1002 aa17.43■□□□□ 0.38
RFTN1-204ENST00000441460 TRIM28Q13263 835 aaKnown RBP17.43■□□□□ 0.38
RFTN1-204ENST00000441460 RIC3Q7Z5B4 369 aa17.43■□□□□ 0.38
RFTN1-204ENST00000441460 FAM89AQ96GI7 184 aa17.43■□□□□ 0.38
RFTN1-204ENST00000441460 ZNF277Q9NRM2 450 aaPredicted RBP17.43■□□□□ 0.38
RFTN1-204ENST00000441460 ABCC4O15439 1325 aa17.43■□□□□ 0.38
RFTN1-204ENST00000441460 LAMB2P55268 1798 aa17.43■□□□□ 0.38
RFTN1-204ENST00000441460 TOMM70O94826 608 aa17.42■□□□□ 0.38
RFTN1-204ENST00000441460 RTKN2Q8IZC4 609 aa17.42■□□□□ 0.38
RFTN1-204ENST00000441460 POTECB2RU33 542 aa17.41■□□□□ 0.38
RFTN1-204ENST00000441460 PPEF1O14829 653 aaPredicted RBP17.41■□□□□ 0.38
RFTN1-204ENST00000441460 G2E3Q7L622 706 aa17.41■□□□□ 0.38
RFTN1-204ENST00000441460 MYD88Q99836 296 aa17.41■□□□□ 0.38
RFTN1-204ENST00000441460 DDX60Q8IY21 1712 aaKnown RBP17.41■□□□□ 0.38
RFTN1-204ENST00000441460 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
RFTN1-204ENST00000441460 PSMD1Q99460 953 aa17.4■□□□□ 0.38
RFTN1-204ENST00000441460 VAMP4O75379 141 aa17.39■□□□□ 0.37
RFTN1-204ENST00000441460 EXOSC9Q06265 439 aaKnown RBP17.39■□□□□ 0.37
RFTN1-204ENST00000441460 CC2D2BQ6DHV5 1058 aa17.39■□□□□ 0.37
RFTN1-204ENST00000441460 METTL22Q9BUU2 404 aaPredicted RBP17.39■□□□□ 0.37
RFTN1-204ENST00000441460 CHMP4AQ9BY43 222 aa17.39■□□□□ 0.37
RFTN1-204ENST00000441460 ZNF521Q96K83 1311 aa17.39■□□□□ 0.37
RFTN1-204ENST00000441460 COL4A5P29400 1685 aa17.39■□□□□ 0.37
RFTN1-204ENST00000441460 DDNO94850 711 aaPredicted RBP17.38■□□□□ 0.37
RFTN1-204ENST00000441460 IARSP41252 1262 aaKnown RBP17.38■□□□□ 0.37
RFTN1-204ENST00000441460 STK31Q9BXU1 1019 aa17.38■□□□□ 0.37
RFTN1-204ENST00000441460 MAP3K2Q9Y2U5 619 aa17.38■□□□□ 0.37
RFTN1-204ENST00000441460 ATP6V0A2Q9Y487 856 aa17.38■□□□□ 0.37
RFTN1-204ENST00000441460 COL4A1P02462 1669 aa17.38■□□□□ 0.37
RFTN1-204ENST00000441460 WDR90Q96KV7 1748 aa17.38■□□□□ 0.37
RFTN1-204ENST00000441460 CEP350Q5VT06 3117 aa17.37■□□□□ 0.37
RFTN1-204ENST00000441460 PI4KAP2A4QPH2 592 aa17.37■□□□□ 0.37
RFTN1-204ENST00000441460 DDX58O95786 925 aaKnown RBP17.37■□□□□ 0.37
RFTN1-204ENST00000441460 SLC4A2P04920 1241 aa17.37■□□□□ 0.37
RFTN1-204ENST00000441460 HSPA6P17066 643 aa17.37■□□□□ 0.37
RFTN1-204ENST00000441460 SF3B3Q15393 1217 aaKnown RBP17.37■□□□□ 0.37
RFTN1-204ENST00000441460 DPY19L2Q6NUT2 758 aa17.37■□□□□ 0.37
RFTN1-204ENST00000441460 KSR2Q6VAB6 950 aa17.37■□□□□ 0.37
RFTN1-204ENST00000441460 PI4KAP1Q8N8J0 262 aa17.37■□□□□ 0.37
RFTN1-204ENST00000441460 ZBTB38Q8NAP3 1195 aaPredicted RBP17.37■□□□□ 0.37
RFTN1-204ENST00000441460 RBM46Q8TBY0 533 aaKnown RBP17.37■□□□□ 0.37
RFTN1-204ENST00000441460 ZNF541Q9H0D2 1346 aa17.37■□□□□ 0.37
RFTN1-204ENST00000441460 TAF1P21675 1872 aa17.36■□□□□ 0.37
RFTN1-204ENST00000441460 IRS4O14654 1257 aaPredicted RBP17.36■□□□□ 0.37
RFTN1-204ENST00000441460 IGKV5-2P06315 115 aa17.36■□□□□ 0.37
RFTN1-204ENST00000441460 VEGFAP15692 232 aaPredicted RBP17.36■□□□□ 0.37
RFTN1-204ENST00000441460 GRAPQ13588 217 aa17.36■□□□□ 0.37
RFTN1-204ENST00000441460 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
RFTN1-204ENST00000441460 CCDC191Q8NCU4 936 aa17.36■□□□□ 0.37
RFTN1-204ENST00000441460 GRAPLQ8TC17 118 aaPredicted RBP17.36■□□□□ 0.37
RFTN1-204ENST00000441460 JARID2Q92833 1246 aaPredicted RBP17.36■□□□□ 0.37
RFTN1-204ENST00000441460 FZD9O00144 591 aa17.35■□□□□ 0.37
RFTN1-204ENST00000441460 BBOX1O75936 387 aa17.35■□□□□ 0.37
RFTN1-204ENST00000441460 C16orf71Q8IYS4 520 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms