RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 KIAA2012Q0VF49 1180 aa12.65□□□□□ -0.38
SYNE2-206ENST00000441438 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
SYNE2-206ENST00000441438 CLASRPQ8N2M8 674 aaKnown RBP12.65□□□□□ -0.38
SYNE2-206ENST00000441438 ERP27Q96DN0 273 aa12.65□□□□□ -0.38
SYNE2-206ENST00000441438 RABL2BQ9UNT1 228 aa12.65□□□□□ -0.38
SYNE2-206ENST00000441438 KLHL33A6NCF5 533 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 PABPN1LA6NDY0 278 aaKnown RBP12.64□□□□□ -0.39
SYNE2-206ENST00000441438 FOSL1P15407 271 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 PDXDC1Q6P996 788 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 CHPFQ8IZ52 775 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 GOLGA1Q92805 767 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 WASHC2AQ641Q2 1341 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 SPDYE5A6NIY4 337 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 C10orf62Q5T681 223 aaPredicted RBP12.64□□□□□ -0.39
SYNE2-206ENST00000441438 DUSP9Q99956 384 aaKnown RBP12.64□□□□□ -0.39
SYNE2-206ENST00000441438 ACAD8Q9UKU7 415 aa12.64□□□□□ -0.39
SYNE2-206ENST00000441438 PRSS47A8MTI9 375 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 RGS20O76081 388 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 ZNF853P0CG23 659 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 ZNF394Q53GI3 561 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 MSL1Q68DK7 614 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 NDUFAF2Q8N183 169 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 CCDC89Q8N998 374 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 TSC1Q92574 1164 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 HFM1A2PYH4 1435 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 NCOA1Q15788 1441 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 YEATS2Q9ULM3 1422 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 CLTCQ00610 1675 aaKnown RBP12.63□□□□□ -0.39
SYNE2-206ENST00000441438 UGGT1Q9NYU2 1555 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 NBPF7P0C2Y1 421 aaPredicted RBP12.63□□□□□ -0.39
SYNE2-206ENST00000441438 HSD3B2P26439 372 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 SLX1AQ9BQ83 275 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 HDAC9Q9UKV0 1011 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 ATP2B1P20020 1258 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 AMHR2Q16671 573 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 MYO1HQ8N1T3 1032 aa12.63□□□□□ -0.39
SYNE2-206ENST00000441438 TMEM238LA0A1B0GVL6 79 aa12.62□□□□□ -0.39
SYNE2-206ENST00000441438 DNAJC21Q5F1R6 531 aaKnown RBP12.62□□□□□ -0.39
SYNE2-206ENST00000441438 ADAMTS19Q8TE59 1207 aa12.62□□□□□ -0.39
SYNE2-206ENST00000441438 CCDC34Q96HJ3 373 aa12.62□□□□□ -0.39
SYNE2-206ENST00000441438 CEP89Q96ST8 783 aa12.62□□□□□ -0.39
SYNE2-206ENST00000441438 SEPT2Q15019 361 aa12.62□□□□□ -0.39
SYNE2-206ENST00000441438 TOMM20Q15388 145 aa12.62□□□□□ -0.39
SYNE2-206ENST00000441438 OXER1Q8TDS5 423 aa12.62□□□□□ -0.39
SYNE2-206ENST00000441438 CCDC102AQ96A19 550 aa12.61□□□□□ -0.39
SYNE2-206ENST00000441438 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
SYNE2-206ENST00000441438 CEP152O94986 1710 aa12.61□□□□□ -0.39
SYNE2-206ENST00000441438 SPHKAPQ2M3C7 1700 aa12.61□□□□□ -0.39
SYNE2-206ENST00000441438 KLHL10Q6JEL2 608 aa12.61□□□□□ -0.39
SYNE2-206ENST00000441438 CCDC73Q6ZRK6 1079 aa12.61□□□□□ -0.39
SYNE2-206ENST00000441438 RMI1Q9H9A7 625 aa12.61□□□□□ -0.39
SYNE2-206ENST00000441438 CLIC5Q9NZA1 410 aa12.61□□□□□ -0.39
SYNE2-206ENST00000441438 IFT172Q9UG01 1749 aa12.61□□□□□ -0.39
SYNE2-206ENST00000441438 GOLGA6L3A6NEY3 463 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-206ENST00000441438 PLPP6Q8IY26 295 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 PHC3Q8NDX5 983 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 SLIT1O75093 1534 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 GOLGA6L6A8MZA4 724 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 NEFHP12036 1026 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 INHBEP58166 350 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 FRS2Q8WU20 508 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 ZNF396Q96N95 335 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-206ENST00000441438 PDGFDQ9GZP0 370 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-206ENST00000441438 ANKRD30AQ9BXX3 1397 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 KIF5CO60282 957 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 PHLDB3Q6NSJ2 640 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 CDHR1Q96JP9 859 aa12.6□□□□□ -0.39
SYNE2-206ENST00000441438 PTK7Q13308 1070 aa12.59□□□□□ -0.39
SYNE2-206ENST00000441438 ZCCHC8Q6NZY4 707 aaKnown RBP12.59□□□□□ -0.39
SYNE2-206ENST00000441438 WDR75Q8IWA0 830 aaKnown RBP12.59□□□□□ -0.39
SYNE2-206ENST00000441438 INTUQ9ULD6 942 aa12.59□□□□□ -0.39
SYNE2-206ENST00000441438 KIF16BQ96L93 1317 aa12.59□□□□□ -0.39
SYNE2-206ENST00000441438 PTPRKQ15262 1439 aa12.59□□□□□ -0.39
SYNE2-206ENST00000441438 POLR3CQ9BUI4 534 aaPredicted RBP12.59□□□□□ -0.39
SYNE2-206ENST00000441438 NUCKS1Q9H1E3 243 aaKnown RBP12.59□□□□□ -0.39
SYNE2-206ENST00000441438 RBM5P52756 815 aaKnown RBP eCLIP12.58□□□□□ -0.39
SYNE2-206ENST00000441438 CBLBQ13191 982 aa12.58□□□□□ -0.39
SYNE2-206ENST00000441438 FBXO33Q7Z6M2 555 aa12.58□□□□□ -0.39
SYNE2-206ENST00000441438 POLG2Q9UHN1 485 aa12.58□□□□□ -0.39
SYNE2-206ENST00000441438 MED14O60244 1454 aa12.58□□□□□ -0.39
SYNE2-206ENST00000441438 SYNMO15061 1565 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 TNFRSF10BO14763 440 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 NPHP1O15259 732 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 LETM1O95202 739 aaPredicted RBP12.58□□□□□ -0.4
SYNE2-206ENST00000441438 LMBRD2Q68DH5 695 aaPredicted RBP12.58□□□□□ -0.4
SYNE2-206ENST00000441438 ALKBH2Q6NS38 261 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 PPM1EQ8WY54 764 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 FMNL2Q96PY5 1086 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 KMT5AQ9NQR1 393 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 TRPM2O94759 1503 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 TONSLQ96HA7 1378 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 GOLGA6L22H0YM25 854 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 TBX3O15119 743 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 TPM3P06753 285 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 CCDC15Q0P6D6 951 aa12.58□□□□□ -0.4
SYNE2-206ENST00000441438 LCA5Q86VQ0 697 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms