RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TCHHQ07283 1943 aa14.18□□□□□ -0.14
LTBR-203ENST00000441074 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
LTBR-203ENST00000441074 TEFQ10587 303 aa14.18□□□□□ -0.14
LTBR-203ENST00000441074 SLC4A10Q6U841 1118 aa14.18□□□□□ -0.14
LTBR-203ENST00000441074 ABCA3Q99758 1704 aa14.17□□□□□ -0.14
LTBR-203ENST00000441074 BTBD11A6QL63 1104 aa14.17□□□□□ -0.14
LTBR-203ENST00000441074 SMTNL1A8MU46 457 aa14.17□□□□□ -0.14
LTBR-203ENST00000441074 IGSF3O75054 1194 aa14.17□□□□□ -0.14
LTBR-203ENST00000441074 GNAI3P08754 354 aa14.17□□□□□ -0.14
LTBR-203ENST00000441074 SPC24Q8NBT2 197 aa14.17□□□□□ -0.14
LTBR-203ENST00000441074 NGLY1Q96IV0 654 aa14.17□□□□□ -0.14
LTBR-203ENST00000441074 CGNQ9P2M7 1197 aaKnown RBP14.17□□□□□ -0.14
LTBR-203ENST00000441074 LRRC37A3O60309 1634 aa14.17□□□□□ -0.14
LTBR-203ENST00000441074 AOX1Q06278 1338 aa14.17□□□□□ -0.14
LTBR-203ENST00000441074 RNMTO43148 476 aaKnown RBP14.16□□□□□ -0.14
LTBR-203ENST00000441074 STX6O43752 255 aa14.16□□□□□ -0.14
LTBR-203ENST00000441074 SLC39A6Q13433 755 aa14.16□□□□□ -0.14
LTBR-203ENST00000441074 STK31Q9BXU1 1019 aa14.16□□□□□ -0.14
LTBR-203ENST00000441074 DDX41Q9UJV9 622 aaKnown RBP14.16□□□□□ -0.14
LTBR-203ENST00000441074 PXDNLA1KZ92 1463 aa14.16□□□□□ -0.14
LTBR-203ENST00000441074 FAM208AQ9UK61 1670 aaKnown RBP14.16□□□□□ -0.14
LTBR-203ENST00000441074 CEMIPQ8WUJ3 1361 aa14.16□□□□□ -0.14
LTBR-203ENST00000441074 F13A1P00488 732 aa14.16□□□□□ -0.14
LTBR-203ENST00000441074 HSPA4P34932 840 aa14.16□□□□□ -0.14
LTBR-203ENST00000441074 TOM1L2Q6ZVM7 507 aa14.16□□□□□ -0.14
LTBR-203ENST00000441074 LRRCC1Q9C099 1032 aa14.16□□□□□ -0.14
LTBR-203ENST00000441074 CCDC192P0DO97 292 aa14.15□□□□□ -0.14
LTBR-203ENST00000441074 SYT1P21579 422 aa14.15□□□□□ -0.14
LTBR-203ENST00000441074 AMOTQ4VCS5 1084 aa14.15□□□□□ -0.14
LTBR-203ENST00000441074 PHAXQ9H814 394 aaKnown RBP14.15□□□□□ -0.14
LTBR-203ENST00000441074 TMEM51Q9NW97 253 aa14.15□□□□□ -0.14
LTBR-203ENST00000441074 STAP2Q9UGK3 403 aa14.15□□□□□ -0.14
LTBR-203ENST00000441074 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.15□□□□□ -0.14
LTBR-203ENST00000441074 RGPD5Q99666 1765 aa14.15□□□□□ -0.14
LTBR-203ENST00000441074 CPDO75976 1380 aa14.15□□□□□ -0.14
LTBR-203ENST00000441074 MEGF6O75095 1541 aa14.15□□□□□ -0.14
LTBR-203ENST00000441074 TSHZ3Q63HK5 1081 aa14.15□□□□□ -0.14
LTBR-203ENST00000441074 LARP1Q6PKG0 1096 aaKnown RBP14.15□□□□□ -0.14
LTBR-203ENST00000441074 RILPL2Q969X0 211 aa14.15□□□□□ -0.14
LTBR-203ENST00000441074 MORC2Q9Y6X9 1032 aaPredicted RBP14.15□□□□□ -0.14
LTBR-203ENST00000441074 TRIM6-TRIM34B2RNG4 842 aa14.14□□□□□ -0.15
LTBR-203ENST00000441074 CYP27B1O15528 508 aa14.14□□□□□ -0.15
LTBR-203ENST00000441074 FIBPO43427 364 aa14.14□□□□□ -0.15
LTBR-203ENST00000441074 SLFN14P0C7P3 912 aa14.14□□□□□ -0.15
LTBR-203ENST00000441074 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
LTBR-203ENST00000441074 NFATC2IPQ8NCF5 419 aa14.14□□□□□ -0.15
LTBR-203ENST00000441074 BTG4Q9NY30 223 aa14.14□□□□□ -0.15
LTBR-203ENST00000441074 PAXBP1Q9Y5B6 917 aa14.14□□□□□ -0.15
LTBR-203ENST00000441074 CACNA1FO60840 1977 aa14.14□□□□□ -0.15
LTBR-203ENST00000441074 PTGS1P23219 599 aa14.14□□□□□ -0.15
LTBR-203ENST00000441074 FAM200AQ8TCP9 573 aa14.14□□□□□ -0.15
LTBR-203ENST00000441074 TATP17735 454 aaPredicted RBP14.13□□□□□ -0.15
LTBR-203ENST00000441074 TPRNQ4KMQ1 711 aa14.13□□□□□ -0.15
LTBR-203ENST00000441074 HDGFL1Q5TGJ6 251 aa14.13□□□□□ -0.15
LTBR-203ENST00000441074 CCDC30Q5VVM6 783 aa14.13□□□□□ -0.15
LTBR-203ENST00000441074 TTC14Q96N46 770 aa14.13□□□□□ -0.15
LTBR-203ENST00000441074 EXOC6BQ9Y2D4 811 aa14.13□□□□□ -0.15
LTBR-203ENST00000441074 ATP8B2P98198 1209 aa14.13□□□□□ -0.15
LTBR-203ENST00000441074 LIMCH1Q9UPQ0 1083 aa14.13□□□□□ -0.15
LTBR-203ENST00000441074 SMC3Q9UQE7 1217 aa14.13□□□□□ -0.15
LTBR-203ENST00000441074 PHKG2P15735 406 aa14.12□□□□□ -0.15
LTBR-203ENST00000441074 FLIIQ13045 1269 aa14.12□□□□□ -0.15
LTBR-203ENST00000441074 BABAM1Q9NWV8 329 aa14.12□□□□□ -0.15
LTBR-203ENST00000441074 CHPF2Q9P2E5 772 aa14.12□□□□□ -0.15
LTBR-203ENST00000441074 CAMTA1Q9Y6Y1 1673 aa14.11□□□□□ -0.15
LTBR-203ENST00000441074 AFF2P51816 1311 aa14.11□□□□□ -0.15
LTBR-203ENST00000441074 TNNT1P13805 278 aa14.11□□□□□ -0.15
LTBR-203ENST00000441074 EVA1CP58658 441 aa14.11□□□□□ -0.15
LTBR-203ENST00000441074 CCDC186Q7Z3E2 898 aa14.11□□□□□ -0.15
LTBR-203ENST00000441074 KIF18AQ8NI77 898 aa14.11□□□□□ -0.15
LTBR-203ENST00000441074 DDX54Q8TDD1 881 aaKnown RBP14.11□□□□□ -0.15
LTBR-203ENST00000441074 NCAPD2Q15021 1401 aa14.11□□□□□ -0.15
LTBR-203ENST00000441074 PIP4K2AP48426 406 aaPredicted RBP14.1□□□□□ -0.15
LTBR-203ENST00000441074 FNBP4Q8N3X1 1017 aaPredicted RBP14.1□□□□□ -0.15
LTBR-203ENST00000441074 CCDC112Q8NEF3 446 aa14.1□□□□□ -0.15
LTBR-203ENST00000441074 C16orf45Q96MC5 204 aaPredicted RBP14.1□□□□□ -0.15
LTBR-203ENST00000441074 AK2P54819 239 aa14.1□□□□□ -0.15
LTBR-203ENST00000441074 DNM1Q05193 864 aaKnown RBP14.1□□□□□ -0.15
LTBR-203ENST00000441074 TERF2Q15554 542 aa14.1□□□□□ -0.15
LTBR-203ENST00000441074 PROSER3Q2NL68 480 aa14.1□□□□□ -0.15
LTBR-203ENST00000441074 RUFY3Q7L099 469 aa14.1□□□□□ -0.15
LTBR-203ENST00000441074 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.1□□□□□ -0.15
LTBR-203ENST00000441074 UNC5CLQ8IV45 518 aa14.1□□□□□ -0.15
LTBR-203ENST00000441074 USP21Q9UK80 565 aa14.1□□□□□ -0.15
LTBR-203ENST00000441074 SNX14Q9Y5W7 946 aa14.1□□□□□ -0.15
LTBR-203ENST00000441074 CCDC66A2RUB6 948 aa14.09□□□□□ -0.15
LTBR-203ENST00000441074 MTMR6Q9Y217 621 aa14.09□□□□□ -0.15
LTBR-203ENST00000441074 MRVI1Q9Y6F6 885 aa14.09□□□□□ -0.15
LTBR-203ENST00000441074 WDR17Q8IZU2 1322 aa14.09□□□□□ -0.15
LTBR-203ENST00000441074 RAD50Q92878 1312 aa14.09□□□□□ -0.15
LTBR-203ENST00000441074 MAP3K11Q16584 847 aa14.09□□□□□ -0.15
LTBR-203ENST00000441074 ZSCAN25Q6NSZ9 544 aa14.09□□□□□ -0.15
LTBR-203ENST00000441074 KRT222Q8N1A0 295 aa14.09□□□□□ -0.15
LTBR-203ENST00000441074 IL25Q9H293 177 aa14.09□□□□□ -0.15
LTBR-203ENST00000441074 SPG7Q9UQ90 795 aa14.09□□□□□ -0.15
LTBR-203ENST00000441074 RAB11FIP3O75154 756 aa14.08□□□□□ -0.16
LTBR-203ENST00000441074 TYRO3Q06418 890 aa14.08□□□□□ -0.16
LTBR-203ENST00000441074 LRMPQ12912 555 aa14.08□□□□□ -0.16
LTBR-203ENST00000441074 COL14A1Q05707 1796 aaKnown RBP14.08□□□□□ -0.16
LTBR-203ENST00000441074 KDM6AO15550 1401 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms