RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 C8orf76Q96K31 380 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 CARD14Q9BXL6 1004 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 NWD1Q149M9 1564 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 SPC24Q8NBT2 197 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 PCDHB15Q9Y5E8 787 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 VAMP4O75379 141 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 PDE4CQ08493 712 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 ANKRD13DQ6ZTN6 518 aa7.47□□□□□ -1.21
CNOT1-202ENST00000441024 CDC5LQ99459 802 aaKnown RBP7.47□□□□□ -1.21
CNOT1-202ENST00000441024 TTC41PQ6P2S7 1318 aa7.46□□□□□ -1.21
CNOT1-202ENST00000441024 MAP3K5Q99683 1374 aa7.46□□□□□ -1.21
CNOT1-202ENST00000441024 ODF2Q5BJF6 829 aa7.46□□□□□ -1.21
CNOT1-202ENST00000441024 SIRT1Q96EB6 747 aa7.46□□□□□ -1.21
CNOT1-202ENST00000441024 PYM1Q9BRP8 204 aaKnown RBP7.46□□□□□ -1.21
CNOT1-202ENST00000441024 DCTPP1Q9H773 170 aa7.46□□□□□ -1.21
CNOT1-202ENST00000441024 NEMFO60524 1076 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 SSFA2P28290 1259 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 PDE1AP54750 535 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 SF3B2Q13435 895 aaKnown RBP7.46□□□□□ -1.22
CNOT1-202ENST00000441024 SYCE3A1L190 88 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 MCM5P33992 734 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 SSRP1Q08945 709 aaKnown RBP7.46□□□□□ -1.22
CNOT1-202ENST00000441024 NOM1Q5C9Z4 860 aaKnown RBP7.46□□□□□ -1.22
CNOT1-202ENST00000441024 IQCA1Q86XH1 822 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 C8orf58Q8NAV2 365 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 CTCFLQ8NI51 663 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-202ENST00000441024 DDX11Q96FC9 970 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 ZMYM3Q14202 1370 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 LDHCP07864 332 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 SYCP1Q15431 976 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 IQCEQ6IPM2 695 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 SMC5Q8IY18 1101 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 ZSCAN16Q9H4T2 348 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-202ENST00000441024 SLC12A7Q9Y666 1083 aa7.46□□□□□ -1.22
CNOT1-202ENST00000441024 STX6O43752 255 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 ERLIN1O75477 346 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 SDSP20132 328 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 CWC15Q9P013 229 aaKnown RBP7.45□□□□□ -1.22
CNOT1-202ENST00000441024 CEP170BQ9Y4F5 1589 aaPredicted RBP7.45□□□□□ -1.22
CNOT1-202ENST00000441024 USP5P45974 858 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 BLMP54132 1417 aaPredicted RBP7.45□□□□□ -1.22
CNOT1-202ENST00000441024 KLHL40Q2TBA0 621 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 SPTY2D1Q68D10 685 aaPredicted RBP7.45□□□□□ -1.22
CNOT1-202ENST00000441024 ZCRB1Q8TBF4 217 aaKnown RBP7.45□□□□□ -1.22
CNOT1-202ENST00000441024 NEK1Q96PY6 1258 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 ESYT1Q9BSJ8 1104 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 TMOD2Q9NZR1 351 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 ABCF2Q9UG63 623 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 PHRF1Q9P1Y6 1649 aaKnown RBP7.45□□□□□ -1.22
CNOT1-202ENST00000441024 BRPF1P55201 1214 aaPredicted RBP7.45□□□□□ -1.22
CNOT1-202ENST00000441024 CCDC178Q5BJE1 867 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 MEIS3Q99687 375 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 ZBTB40Q9NUA8 1239 aa7.45□□□□□ -1.22
CNOT1-202ENST00000441024 BAG4O95429 457 aaKnown RBP7.44□□□□□ -1.22
CNOT1-202ENST00000441024 HOXB7P09629 217 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 ATP2B2Q01814 1243 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 MTHFSDQ2M296 383 aaKnown RBP7.44□□□□□ -1.22
CNOT1-202ENST00000441024 SAMD1Q6SPF0 538 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-202ENST00000441024 LINS1Q8NG48 757 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 SEC63Q9UGP8 760 aaKnown RBP7.44□□□□□ -1.22
CNOT1-202ENST00000441024 GOLGA8AA7E2F4 631 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 GOLGA8BA8MQT2 603 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 GRM8O00222 908 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 GJB2P29033 226 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 IL15P40933 162 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-202ENST00000441024 PDCL2Q8N4E4 241 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 NCOA7Q8NI08 942 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 CHPF2Q9P2E5 772 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 POLR3DP05423 398 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-202ENST00000441024 UBE2HP62256 183 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 IP6K1Q92551 441 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 CCDC85AQ96PX6 553 aaPredicted RBP7.44□□□□□ -1.22
CNOT1-202ENST00000441024 SLIT1O75093 1534 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 MON2Q7Z3U7 1717 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 SBNO1A3KN83 1393 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 KIF24Q5T7B8 1368 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 SBNO2Q9Y2G9 1366 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 RAD50Q92878 1312 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 ZSCAN12O43309 604 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 ERLIN2O94905 339 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 LDHAL6AQ6ZMR3 332 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 UBE3BQ7Z3V4 1068 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 CATIPQ7Z7H3 387 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 DZIP1Q86YF9 867 aaKnown RBP7.44□□□□□ -1.22
CNOT1-202ENST00000441024 RAB34Q9BZG1 259 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 MKNK2Q9HBH9 465 aa7.44□□□□□ -1.22
CNOT1-202ENST00000441024 IFIT3O14879 490 aaKnown RBP7.43□□□□□ -1.22
CNOT1-202ENST00000441024 C8orf34Q49A92 452 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 WWC2Q6AWC2 1192 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 KANK3Q6NY19 840 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 BICDL1Q6ZP65 573 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 CCDC12Q8WUD4 166 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-202ENST00000441024 DEF6Q9H4E7 631 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 ZBTB3Q9H5J0 574 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 GOLIM4O00461 696 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 FGFR1OPO95684 399 aaKnown RBP7.43□□□□□ -1.22
CNOT1-202ENST00000441024 FERMT3Q86UX7 667 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 SMARCC1Q92922 1105 aaPredicted RBP7.43□□□□□ -1.22
CNOT1-202ENST00000441024 C19orf44Q9H6X5 657 aa7.43□□□□□ -1.22
CNOT1-202ENST00000441024 ARHGAP23Q9P227 1491 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms