RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 NOD1Q9Y239 953 aa9.16□□□□□ -0.94
CHD6-204ENST00000440647 MROH1Q8NDA8 1641 aa9.16□□□□□ -0.94
CHD6-204ENST00000440647 ERVK-7P63135 1459 aa9.15□□□□□ -0.94
CHD6-204ENST00000440647 NPHP4O75161 1426 aaPredicted RBP9.15□□□□□ -0.94
CHD6-204ENST00000440647 USP17L5A8MUK1 530 aa9.15□□□□□ -0.94
CHD6-204ENST00000440647 STAU1O95793 577 aaKnown RBP9.15□□□□□ -0.94
CHD6-204ENST00000440647 WDR44Q5JSH3 913 aa9.15□□□□□ -0.94
CHD6-204ENST00000440647 TBC1D9Q6ZT07 1266 aa9.15□□□□□ -0.94
CHD6-204ENST00000440647 SVOPQ8N4V2 548 aa9.15□□□□□ -0.94
CHD6-204ENST00000440647 GLMNQ92990 594 aa9.15□□□□□ -0.94
CHD6-204ENST00000440647 UCN2Q96RP3 112 aa9.15□□□□□ -0.94
CHD6-204ENST00000440647 ZSCAN10Q96SZ4 725 aaPredicted RBP9.15□□□□□ -0.94
CHD6-204ENST00000440647 PCDHGA11Q9Y5H2 935 aa9.15□□□□□ -0.94
CHD6-204ENST00000440647 UBR1Q8IWV7 1749 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 ATP9BO43861 1147 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 INHAP05111 366 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 SLURP2P0DP57 97 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 SCNN1DP51172 638 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 GDF10P55107 478 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 NBPF10Q6P3W6 841 aaKnown RBP9.14□□□□□ -0.95
CHD6-204ENST00000440647 DEPDC4Q8N2C3 294 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 NBPF15Q8N660 670 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 FHDC1Q9C0D6 1143 aaPredicted RBP9.14□□□□□ -0.95
CHD6-204ENST00000440647 VWDEQ8N2E2 1590 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 PRDM15P57071 1507 aaPredicted RBP9.14□□□□□ -0.95
CHD6-204ENST00000440647 MED14O60244 1454 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 ERBINQ96RT1 1412 aa9.14□□□□□ -0.95
CHD6-204ENST00000440647 KIF15Q9NS87 1388 aa9.13□□□□□ -0.95
CHD6-204ENST00000440647 SYNMO15061 1565 aa9.13□□□□□ -0.95
CHD6-204ENST00000440647 WASLO00401 505 aaPredicted RBP9.13□□□□□ -0.95
CHD6-204ENST00000440647 TOM1O60784 492 aa9.13□□□□□ -0.95
CHD6-204ENST00000440647 PIP4K2BP78356 416 aa9.13□□□□□ -0.95
CHD6-204ENST00000440647 ILDR2Q71H61 639 aa9.13□□□□□ -0.95
CHD6-204ENST00000440647 TAS1R3Q7RTX0 852 aa9.13□□□□□ -0.95
CHD6-204ENST00000440647 PLEKHM2Q8IWE5 1019 aa9.13□□□□□ -0.95
CHD6-204ENST00000440647 TMEM151AQ8N4L1 468 aa9.13□□□□□ -0.95
CHD6-204ENST00000440647 DYRK1BQ9Y463 629 aa9.13□□□□□ -0.95
CHD6-204ENST00000440647 GTF2E1P29083 439 aaPredicted RBP9.12□□□□□ -0.95
CHD6-204ENST00000440647 RNFT1Q5M7Z0 435 aa9.12□□□□□ -0.95
CHD6-204ENST00000440647 ZNF385CQ66K41 422 aaPredicted RBP9.12□□□□□ -0.95
CHD6-204ENST00000440647 CALR3Q96L12 384 aaKnown RBP9.12□□□□□ -0.95
CHD6-204ENST00000440647 DAPK1P53355 1430 aa9.12□□□□□ -0.95
CHD6-204ENST00000440647 KANK1Q14678 1352 aa9.12□□□□□ -0.95
CHD6-204ENST00000440647 USP17L3A6NCW0 530 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 USP17L4A6NCW7 530 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 TMEM229AB2RXF0 380 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 H7C1W4 665 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 GDF11O95390 407 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 MARSP56192 900 aaKnown RBP9.11□□□□□ -0.95
CHD6-204ENST00000440647 GTF2IP78347 998 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 TMEM214Q6NUQ4 689 aaKnown RBP9.11□□□□□ -0.95
CHD6-204ENST00000440647 USP17L2Q6R6M4 530 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 USP17L1Q7RTZ2 530 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 TIMMDC1Q9NPL8 285 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 ENAMQ9NRM1 1142 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 ABCC5O15440 1437 aa9.11□□□□□ -0.95
CHD6-204ENST00000440647 STRCP1A6NGW2 1772 aa9.1□□□□□ -0.95
CHD6-204ENST00000440647 MAP3K10Q02779 954 aa9.1□□□□□ -0.95
CHD6-204ENST00000440647 RASSF7Q02833 373 aa9.1□□□□□ -0.95
CHD6-204ENST00000440647 SRSF11Q05519 484 aaKnown RBP9.1□□□□□ -0.95
CHD6-204ENST00000440647 TLR1Q15399 786 aa9.1□□□□□ -0.95
CHD6-204ENST00000440647 GNASQ5JWF2 1037 aa9.1□□□□□ -0.95
CHD6-204ENST00000440647 TRIM50Q86XT4 487 aa9.1□□□□□ -0.95
CHD6-204ENST00000440647 PPARGC1BQ86YN6 1023 aaKnown RBP9.1□□□□□ -0.95
CHD6-204ENST00000440647 SLC4A9Q96Q91 983 aa9.1□□□□□ -0.95
CHD6-204ENST00000440647 RRP7BPQ9NSQ0 103 aa9.1□□□□□ -0.95
CHD6-204ENST00000440647 TFIP11Q9UBB9 837 aaKnown RBP9.1□□□□□ -0.95
CHD6-204ENST00000440647 FGD6Q6ZV73 1430 aa9.1□□□□□ -0.95
CHD6-204ENST00000440647 PIK3C2BO00750 1634 aa9.09□□□□□ -0.95
CHD6-204ENST00000440647 SCAF11Q99590 1463 aaKnown RBP9.09□□□□□ -0.95
CHD6-204ENST00000440647 MED1Q15648 1581 aaPredicted RBP9.09□□□□□ -0.95
CHD6-204ENST00000440647 ARHGAP31Q2M1Z3 1444 aa9.09□□□□□ -0.95
CHD6-204ENST00000440647 SMTNP53814 917 aa9.09□□□□□ -0.95
CHD6-204ENST00000440647 TRIM22Q8IYM9 498 aa9.09□□□□□ -0.95
CHD6-204ENST00000440647 SCARF2Q96GP6 870 aaPredicted RBP9.09□□□□□ -0.95
CHD6-204ENST00000440647 CUEDC1Q9NWM3 386 aaPredicted RBP9.09□□□□□ -0.95
CHD6-204ENST00000440647 ANKRD30AQ9BXX3 1397 aa9.09□□□□□ -0.95
CHD6-204ENST00000440647 KDM5AP29375 1690 aaKnown RBP9.08□□□□□ -0.96
CHD6-204ENST00000440647 ZBTB7BO15156 539 aaPredicted RBP9.08□□□□□ -0.96
CHD6-204ENST00000440647 HSPA1LP34931 641 aa9.08□□□□□ -0.96
CHD6-204ENST00000440647 PHKA2P46019 1235 aa9.08□□□□□ -0.96
CHD6-204ENST00000440647 C4orf17Q53FE4 359 aa9.08□□□□□ -0.96
CHD6-204ENST00000440647 RHBDD1Q8TEB9 315 aa9.08□□□□□ -0.96
CHD6-204ENST00000440647 GAS2L1Q99501 681 aaPredicted RBP9.08□□□□□ -0.96
CHD6-204ENST00000440647 MKRN1Q9UHC7 482 aaKnown RBP9.08□□□□□ -0.96
CHD6-204ENST00000440647 SERTAD1Q9UHV2 236 aa9.08□□□□□ -0.96
CHD6-204ENST00000440647 EID1Q9Y6B2 187 aa9.08□□□□□ -0.96
CHD6-204ENST00000440647 SLIT1O75093 1534 aa9.08□□□□□ -0.96
CHD6-204ENST00000440647 LRRC7Q96NW7 1537 aa9.07□□□□□ -0.96
CHD6-204ENST00000440647 PALM3A6NDB9 673 aaPredicted RBP9.07□□□□□ -0.96
CHD6-204ENST00000440647 BACH1O14867 736 aa9.07□□□□□ -0.96
CHD6-204ENST00000440647 ADAMTS2O95450 1211 aa9.07□□□□□ -0.96
CHD6-204ENST00000440647 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
CHD6-204ENST00000440647 PSME1Q06323 249 aa9.07□□□□□ -0.96
CHD6-204ENST00000440647 RIPOR1Q6ZS17 1223 aa9.07□□□□□ -0.96
CHD6-204ENST00000440647 PPP1R12CQ9BZL4 782 aa9.07□□□□□ -0.96
CHD6-204ENST00000440647 ZMYND15Q9H091 742 aa9.07□□□□□ -0.96
CHD6-204ENST00000440647 ARHGAP23Q9P227 1491 aa9.07□□□□□ -0.96
CHD6-204ENST00000440647 EFCAB6Q5THR3 1501 aa9.06□□□□□ -0.96
CHD6-204ENST00000440647 LMTK2Q8IWU2 1503 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms