RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PRELPP51888 382 aa25.74■■□□□ 1.71
SHROOM1-204ENST00000440118 UTP14AQ9BVJ6 771 aaKnown RBP25.74■■□□□ 1.71
SHROOM1-204ENST00000440118 DBF4Q9UBU7 674 aaPredicted RBP25.74■■□□□ 1.71
SHROOM1-204ENST00000440118 NTSR2O95665 410 aa25.73■■□□□ 1.71
SHROOM1-204ENST00000440118 RRAGCQ9HB90 399 aa25.73■■□□□ 1.71
SHROOM1-204ENST00000440118 HSPA6P17066 643 aa25.71■■□□□ 1.71
SHROOM1-204ENST00000440118 CRY2Q49AN0 593 aa25.71■■□□□ 1.71
SHROOM1-204ENST00000440118 DPY19L2Q6NUT2 758 aa25.71■■□□□ 1.71
SHROOM1-204ENST00000440118 HYPKQ9NX55 129 aa25.71■■□□□ 1.71
SHROOM1-204ENST00000440118 GLTPD2A6NH11 291 aa25.7■■□□□ 1.7
SHROOM1-204ENST00000440118 ZNF853P0CG23 659 aa25.7■■□□□ 1.7
SHROOM1-204ENST00000440118 RBM17Q96I25 401 aaKnown RBP25.7■■□□□ 1.7
SHROOM1-204ENST00000440118 RNF123Q5XPI4 1314 aa25.69■■□□□ 1.7
SHROOM1-204ENST00000440118 ELL2O00472 640 aaPredicted RBP25.69■■□□□ 1.7
SHROOM1-204ENST00000440118 RTKN2Q8IZC4 609 aa25.69■■□□□ 1.7
SHROOM1-204ENST00000440118 NLRP3Q96P20 1036 aa25.69■■□□□ 1.7
SHROOM1-204ENST00000440118 LAMB2P55268 1798 aa25.69■■□□□ 1.7
SHROOM1-204ENST00000440118 TCIRG1Q13488 830 aa25.68■■□□□ 1.7
SHROOM1-204ENST00000440118 PLBD2Q8NHP8 589 aa25.68■■□□□ 1.7
SHROOM1-204ENST00000440118 FKBP4Q02790 459 aaKnown RBP eCLIP25.67■■□□□ 1.7
SHROOM1-204ENST00000440118 OLFM4Q6UX06 510 aa25.67■■□□□ 1.7
SHROOM1-204ENST00000440118 NLRP10Q86W26 655 aa25.67■■□□□ 1.7
SHROOM1-204ENST00000440118 RBM46Q8TBY0 533 aaKnown RBP25.67■■□□□ 1.7
SHROOM1-204ENST00000440118 C7orf43Q8WVR3 580 aa25.67■■□□□ 1.7
SHROOM1-204ENST00000440118 TMX4Q9H1E5 349 aaPredicted RBP25.67■■□□□ 1.7
SHROOM1-204ENST00000440118 TRMT112Q9UI30 125 aaKnown RBP25.67■■□□□ 1.7
SHROOM1-204ENST00000440118 GOLGA2Q08379 1002 aa25.66■■□□□ 1.7
SHROOM1-204ENST00000440118 ANKRD13DQ6ZTN6 518 aa25.66■■□□□ 1.7
SHROOM1-204ENST00000440118 CHMP4AQ9BY43 222 aa25.66■■□□□ 1.7
SHROOM1-204ENST00000440118 SH3TC1Q8TE82 1336 aa25.65■■□□□ 1.7
SHROOM1-204ENST00000440118 ZNF277Q9NRM2 450 aaPredicted RBP25.65■■□□□ 1.7
SHROOM1-204ENST00000440118 WDR90Q96KV7 1748 aa25.64■■□□□ 1.7
SHROOM1-204ENST00000440118 TCERG1O14776 1098 aaKnown RBP25.64■■□□□ 1.7
SHROOM1-204ENST00000440118 PPEF1O14829 653 aaPredicted RBP25.64■■□□□ 1.7
SHROOM1-204ENST00000440118 VEGFAP15692 232 aaPredicted RBP25.64■■□□□ 1.7
SHROOM1-204ENST00000440118 HOXA10P31260 410 aaPredicted RBP25.64■■□□□ 1.7
SHROOM1-204ENST00000440118 ZNF428Q96B54 188 aa25.64■■□□□ 1.7
SHROOM1-204ENST00000440118 CC2D2BQ6DHV5 1058 aa25.63■■□□□ 1.69
SHROOM1-204ENST00000440118 C3orf67Q6ZVT6 689 aa25.63■■□□□ 1.69
SHROOM1-204ENST00000440118 RIC3Q7Z5B4 369 aa25.63■■□□□ 1.69
SHROOM1-204ENST00000440118 CRAMP1Q96RY5 1269 aa25.63■■□□□ 1.69
SHROOM1-204ENST00000440118 HCLS1P14317 486 aaPredicted RBP25.62■■□□□ 1.69
SHROOM1-204ENST00000440118 CCDC27Q2M243 656 aa25.62■■□□□ 1.69
SHROOM1-204ENST00000440118 TSR2Q969E8 191 aaKnown RBP25.62■■□□□ 1.69
SHROOM1-204ENST00000440118 SLC10A5Q5PT55 438 aa25.61■■□□□ 1.69
SHROOM1-204ENST00000440118 CCDC30Q5VVM6 783 aa25.61■■□□□ 1.69
SHROOM1-204ENST00000440118 WWC1Q8IX03 1113 aa25.61■■□□□ 1.69
SHROOM1-204ENST00000440118 C8orf58Q8NAV2 365 aa25.61■■□□□ 1.69
SHROOM1-204ENST00000440118 DDX60Q8IY21 1712 aaKnown RBP25.6■■□□□ 1.69
SHROOM1-204ENST00000440118 ATP5J2-PTCD1G3V325 749 aa25.6■■□□□ 1.69
SHROOM1-204ENST00000440118 IARSP41252 1262 aaKnown RBP25.6■■□□□ 1.69
SHROOM1-204ENST00000440118 FSTL1Q12841 308 aa25.6■■□□□ 1.69
SHROOM1-204ENST00000440118 SYNE4Q8N205 404 aa25.6■■□□□ 1.69
SHROOM1-204ENST00000440118 SMC1BQ8NDV3 1235 aa25.6■■□□□ 1.69
SHROOM1-204ENST00000440118 SALL2Q9Y467 1007 aaPredicted RBP25.6■■□□□ 1.69
SHROOM1-204ENST00000440118 APLP1P51693 650 aa25.59■■□□□ 1.69
SHROOM1-204ENST00000440118 GRIPAP1Q4V328 841 aa25.59■■□□□ 1.69
SHROOM1-204ENST00000440118 DDX58O95786 925 aaKnown RBP25.58■■□□□ 1.69
SHROOM1-204ENST00000440118 DDX46Q7L014 1031 aaKnown RBP25.58■■□□□ 1.69
SHROOM1-204ENST00000440118 JDP2Q8WYK2 163 aa25.58■■□□□ 1.69
SHROOM1-204ENST00000440118 PSMD1Q99460 953 aa25.58■■□□□ 1.69
SHROOM1-204ENST00000440118 STK31Q9BXU1 1019 aa25.58■■□□□ 1.69
SHROOM1-204ENST00000440118 PHAXQ9H814 394 aaKnown RBP25.58■■□□□ 1.69
SHROOM1-204ENST00000440118 ABCC4O15439 1325 aa25.58■■□□□ 1.69
SHROOM1-204ENST00000440118 DDNO94850 711 aaPredicted RBP25.57■■□□□ 1.68
SHROOM1-204ENST00000440118 FAM9BQ8IZU0 186 aa25.57■■□□□ 1.68
SHROOM1-204ENST00000440118 ISCA1Q9BUE6 129 aa25.56■■□□□ 1.68
SHROOM1-204ENST00000440118 SCN4AP35499 1836 aa25.56■■□□□ 1.68
SHROOM1-204ENST00000440118 TAF1P21675 1872 aa25.55■■□□□ 1.68
SHROOM1-204ENST00000440118 RTL5Q5HYW3 569 aaPredicted RBP25.55■■□□□ 1.68
SHROOM1-204ENST00000440118 TSPYL6Q8N831 410 aa25.55■■□□□ 1.68
SHROOM1-204ENST00000440118 FAM89AQ96GI7 184 aa25.55■■□□□ 1.68
SHROOM1-204ENST00000440118 IL16Q14005 1332 aa25.55■■□□□ 1.68
SHROOM1-204ENST00000440118 TWISTNBQ3B726 338 aaPredicted RBP25.54■■□□□ 1.68
SHROOM1-204ENST00000440118 MYD88Q99836 296 aa25.54■■□□□ 1.68
SHROOM1-204ENST00000440118 ZNF541Q9H0D2 1346 aa25.54■■□□□ 1.68
SHROOM1-204ENST00000440118 SNED1Q8TER0 1413 aa25.54■■□□□ 1.68
SHROOM1-204ENST00000440118 IQCA1LA6NCM1 817 aa25.53■■□□□ 1.68
SHROOM1-204ENST00000440118 LARGE2Q8N3Y3 721 aa25.53■■□□□ 1.68
SHROOM1-204ENST00000440118 ATP6V0A2Q9Y487 856 aa25.53■■□□□ 1.68
SHROOM1-204ENST00000440118 GRAPQ13588 217 aa25.52■■□□□ 1.68
SHROOM1-204ENST00000440118 NCBP3Q53F19 620 aaKnown RBP25.52■■□□□ 1.68
SHROOM1-204ENST00000440118 GRAPLQ8TC17 118 aaPredicted RBP25.52■■□□□ 1.68
SHROOM1-204ENST00000440118 BBOX1O75936 387 aa25.51■■□□□ 1.67
SHROOM1-204ENST00000440118 HSP90B1P14625 803 aaKnown RBP25.51■■□□□ 1.67
SHROOM1-204ENST00000440118 EIF6P56537 245 aaKnown RBP25.51■■□□□ 1.67
SHROOM1-204ENST00000440118 CACNA1FO60840 1977 aa25.51■■□□□ 1.67
SHROOM1-204ENST00000440118 IRS4O14654 1257 aaPredicted RBP25.5■■□□□ 1.67
SHROOM1-204ENST00000440118 PPIP5K2O43314 1243 aa25.5■■□□□ 1.67
SHROOM1-204ENST00000440118 DPP8Q6V1X1 898 aaPredicted RBP25.5■■□□□ 1.67
SHROOM1-204ENST00000440118 SLC51AQ86UW1 340 aa25.5■■□□□ 1.67
SHROOM1-204ENST00000440118 SUPT20HQ8NEM7 779 aa25.5■■□□□ 1.67
SHROOM1-204ENST00000440118 FANCIQ9NVI1 1328 aa25.5■■□□□ 1.67
SHROOM1-204ENST00000440118 POTECB2RU33 542 aa25.49■■□□□ 1.67
SHROOM1-204ENST00000440118 TRIM28Q13263 835 aaKnown RBP25.49■■□□□ 1.67
SHROOM1-204ENST00000440118 NIM1KQ8IY84 436 aa25.49■■□□□ 1.67
SHROOM1-204ENST00000440118 TMC4Q7Z404 712 aa25.48■■□□□ 1.67
SHROOM1-204ENST00000440118 WDR63Q8IWG1 891 aa25.48■■□□□ 1.67
SHROOM1-204ENST00000440118 CWC25Q9NXE8 425 aaPredicted RBP25.48■■□□□ 1.67
SHROOM1-204ENST00000440118 MAP3K2Q9Y2U5 619 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 937.9 ms