RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ME1P48163 572 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 ARHGAP29Q52LW3 1261 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 TEX35Q5T0J7 233 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 CCDC8Q9H0W5 538 aaPredicted RBP13.72□□□□□ -0.21
SMPD4-209ENST00000439886 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
SMPD4-209ENST00000439886 RBM8AQ9Y5S9 174 aaKnown RBP13.72□□□□□ -0.21
SMPD4-209ENST00000439886 TULP4Q9NRJ4 1543 aa13.71□□□□□ -0.21
SMPD4-209ENST00000439886 KIF1BO60333 1816 aa13.71□□□□□ -0.21
SMPD4-209ENST00000439886 URI1O94763 535 aaPredicted RBP13.71□□□□□ -0.21
SMPD4-209ENST00000439886 PUS7Q96PZ0 661 aaKnown RBP13.71□□□□□ -0.21
SMPD4-209ENST00000439886 DDX19AQ9NUU7 478 aaKnown RBP13.71□□□□□ -0.21
SMPD4-209ENST00000439886 C9orf78Q9NZ63 289 aaPredicted RBP13.71□□□□□ -0.21
SMPD4-209ENST00000439886 AOPEPQ8N6M6 819 aa13.71□□□□□ -0.21
SMPD4-209ENST00000439886 UBXN4Q92575 508 aa13.71□□□□□ -0.21
SMPD4-209ENST00000439886 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.21
SMPD4-209ENST00000439886 SH2B1Q9NRF2 756 aaPredicted RBP13.71□□□□□ -0.21
SMPD4-209ENST00000439886 PA2G4Q9UQ80 394 aaKnown RBP13.71□□□□□ -0.21
SMPD4-209ENST00000439886 JAK2O60674 1132 aa13.71□□□□□ -0.22
SMPD4-209ENST00000439886 TMC6Q7Z403 805 aa13.71□□□□□ -0.22
SMPD4-209ENST00000439886 AACSQ86V21 672 aa13.71□□□□□ -0.22
SMPD4-209ENST00000439886 LRRC8AQ8IWT6 810 aa13.71□□□□□ -0.22
SMPD4-209ENST00000439886 LEO1Q8WVC0 666 aaPredicted RBP13.71□□□□□ -0.22
SMPD4-209ENST00000439886 KIF1BPQ96EK5 621 aa13.71□□□□□ -0.22
SMPD4-209ENST00000439886 LSG1Q9H089 658 aaKnown RBP13.71□□□□□ -0.22
SMPD4-209ENST00000439886 BOLA2Q9H3K6 86 aa13.71□□□□□ -0.22
SMPD4-209ENST00000439886 YTHDC2Q9H6S0 1430 aaKnown RBP13.7□□□□□ -0.22
SMPD4-209ENST00000439886 TAF7Q15545 349 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-209ENST00000439886 MTHFSDQ2M296 383 aaKnown RBP13.7□□□□□ -0.22
SMPD4-209ENST00000439886 GRIPAP1Q4V328 841 aa13.7□□□□□ -0.22
SMPD4-209ENST00000439886 CCDC34Q96HJ3 373 aa13.7□□□□□ -0.22
SMPD4-209ENST00000439886 GPATCH3Q96I76 525 aa13.7□□□□□ -0.22
SMPD4-209ENST00000439886 YY1AP1Q9H869 796 aa13.7□□□□□ -0.22
SMPD4-209ENST00000439886 BMS1Q14692 1282 aaKnown RBP13.7□□□□□ -0.22
SMPD4-209ENST00000439886 TICAM2Q86XR7 235 aa13.7□□□□□ -0.22
SMPD4-209ENST00000439886 FAM227BQ96M60 508 aa13.7□□□□□ -0.22
SMPD4-209ENST00000439886 MYCBPQ99417 103 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-209ENST00000439886 DNAI1Q9UI46 699 aa13.7□□□□□ -0.22
SMPD4-209ENST00000439886 ARHGAP31Q2M1Z3 1444 aa13.7□□□□□ -0.22
SMPD4-209ENST00000439886 ARHGEF40Q8TER5 1519 aa13.7□□□□□ -0.22
SMPD4-209ENST00000439886 GOLIM4O00461 696 aa13.69□□□□□ -0.22
SMPD4-209ENST00000439886 PTPN21Q16825 1174 aa13.69□□□□□ -0.22
SMPD4-209ENST00000439886 C11orf57Q6ZUT1 292 aaPredicted RBP13.69□□□□□ -0.22
SMPD4-209ENST00000439886 FTOQ9C0B1 505 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMPD4-209ENST00000439886 TMCO3Q6UWJ1 677 aa13.69□□□□□ -0.22
SMPD4-209ENST00000439886 CCAR1Q8IX12 1150 aaKnown RBP13.69□□□□□ -0.22
SMPD4-209ENST00000439886 TTC14Q96N46 770 aa13.69□□□□□ -0.22
SMPD4-209ENST00000439886 ZSWIM4Q9H7M6 989 aa13.69□□□□□ -0.22
SMPD4-209ENST00000439886 MORC2Q9Y6X9 1032 aaPredicted RBP13.69□□□□□ -0.22
SMPD4-209ENST00000439886 NPATQ14207 1427 aa13.69□□□□□ -0.22
SMPD4-209ENST00000439886 HNRNPH2P55795 449 aaKnown RBP13.69□□□□□ -0.22
SMPD4-209ENST00000439886 BRF1Q92994 677 aa13.69□□□□□ -0.22
SMPD4-209ENST00000439886 CARD10Q9BWT7 1032 aa13.69□□□□□ -0.22
SMPD4-209ENST00000439886 CCDC171Q6TFL3 1326 aa13.69□□□□□ -0.22
SMPD4-209ENST00000439886 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
SMPD4-209ENST00000439886 HSP90AA4PQ58FG1 418 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 C10orf67Q8IYJ2 551 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 USP44Q9H0E7 712 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 CLSTN2Q9H4D0 955 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 ARGLU1Q9NWB6 273 aaPredicted RBP13.68□□□□□ -0.22
SMPD4-209ENST00000439886 NPHP3Q7Z494 1330 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 ATP7AQ04656 1500 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 COL3A1P02461 1466 aaPredicted RBP13.68□□□□□ -0.22
SMPD4-209ENST00000439886 SOS1Q07889 1333 aaPredicted RBP13.68□□□□□ -0.22
SMPD4-209ENST00000439886 GLRX3O76003 335 aaKnown RBP13.68□□□□□ -0.22
SMPD4-209ENST00000439886 PSMA5P28066 241 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 VPS53Q5VIR6 699 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 RNF20Q5VTR2 975 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 CREB3L3Q68CJ9 461 aa13.68□□□□□ -0.22
SMPD4-209ENST00000439886 ABCC1P33527 1531 aa13.67□□□□□ -0.22
SMPD4-209ENST00000439886 PNPLA6Q8IY17 1366 aa13.67□□□□□ -0.22
SMPD4-209ENST00000439886 CCT2P78371 535 aaKnown RBP13.67□□□□□ -0.22
SMPD4-209ENST00000439886 EPC1Q9H2F5 836 aa13.67□□□□□ -0.22
SMPD4-209ENST00000439886 ZCCHC17Q9NP64 241 aaKnown RBP13.67□□□□□ -0.22
SMPD4-209ENST00000439886 KIF24Q5T7B8 1368 aa13.67□□□□□ -0.22
SMPD4-209ENST00000439886 SEC31AO94979 1220 aaKnown RBP13.67□□□□□ -0.22
SMPD4-209ENST00000439886 COL9A3Q14050 684 aaPredicted RBP13.67□□□□□ -0.22
SMPD4-209ENST00000439886 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
SMPD4-209ENST00000439886 TET3O43151 1660 aa13.67□□□□□ -0.22
SMPD4-209ENST00000439886 ZFYVE9O95405 1425 aa13.67□□□□□ -0.22
SMPD4-209ENST00000439886 SFPQP23246 707 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMPD4-209ENST00000439886 AIMP1Q12904 312 aaKnown RBP13.66□□□□□ -0.22
SMPD4-209ENST00000439886 PDILTQ8N807 584 aa13.66□□□□□ -0.22
SMPD4-209ENST00000439886 EGFL6Q8IUX8 553 aa13.66□□□□□ -0.22
SMPD4-209ENST00000439886 CEP57L1Q8IYX8 460 aa13.66□□□□□ -0.22
SMPD4-209ENST00000439886 STK11IPQ8N1F8 1099 aa13.66□□□□□ -0.22
SMPD4-209ENST00000439886 FSIP1Q8NA03 581 aa13.66□□□□□ -0.22
SMPD4-209ENST00000439886 GYS2P54840 703 aa13.66□□□□□ -0.22
SMPD4-209ENST00000439886 RBM6P78332 1123 aaKnown RBP13.66□□□□□ -0.22
SMPD4-209ENST00000439886 NMIQ13287 307 aaPredicted RBP13.66□□□□□ -0.22
SMPD4-209ENST00000439886 STAP2Q9UGK3 403 aa13.66□□□□□ -0.22
SMPD4-209ENST00000439886 STX1AQ16623 288 aa13.65□□□□□ -0.22
SMPD4-209ENST00000439886 CT47A1Q5JQC4 288 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-209ENST00000439886 KRBA2Q6ZNG9 492 aa13.65□□□□□ -0.22
SMPD4-209ENST00000439886 LRRN4CLQ8ND94 238 aa13.65□□□□□ -0.22
SMPD4-209ENST00000439886 NDUFB9Q9Y6M9 179 aa13.65□□□□□ -0.22
SMPD4-209ENST00000439886 PI4KAP2A4QPH2 592 aa13.65□□□□□ -0.22
SMPD4-209ENST00000439886 PLA2G4DQ86XP0 818 aa13.65□□□□□ -0.22
SMPD4-209ENST00000439886 USHBP1Q8N6Y0 703 aa13.65□□□□□ -0.22
SMPD4-209ENST00000439886 PI4KAP1Q8N8J0 262 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms