RNA–Protein interactions for RNA: ENST00000439514.1

HLA-W-207, Transcript of major histocompatibility complex, class I, W (pseudogene), humanhuman

BASIC

Gene HLA-W, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-W-207ENST00000439514 SH3TC1Q8TE82 1336 aa16.87■□□□□ 0.29
HLA-W-207ENST00000439514 COL11A2P13942 1736 aaPredicted RBP16.87■□□□□ 0.29
HLA-W-207ENST00000439514 ERFEQ4G0M1 354 aa16.86■□□□□ 0.29
HLA-W-207ENST00000439514 CC2D2BQ6DHV5 1058 aa16.86■□□□□ 0.29
HLA-W-207ENST00000439514 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
HLA-W-207ENST00000439514 ARFGEF2Q9Y6D5 1785 aa16.86■□□□□ 0.29
HLA-W-207ENST00000439514 DIEXFQ68CQ4 756 aaKnown RBP16.85■□□□□ 0.29
HLA-W-207ENST00000439514 NUTM1Q86Y26 1132 aa16.85■□□□□ 0.29
HLA-W-207ENST00000439514 TSPYL6Q8N831 410 aa16.85■□□□□ 0.29
HLA-W-207ENST00000439514 RBM17Q96I25 401 aaKnown RBP16.85■□□□□ 0.29
HLA-W-207ENST00000439514 TRMT112Q9UI30 125 aaKnown RBP16.85■□□□□ 0.29
HLA-W-207ENST00000439514 LTBP3Q9NS15 1303 aa16.85■□□□□ 0.29
HLA-W-207ENST00000439514 ABCC12Q96J65 1359 aa16.85■□□□□ 0.29
HLA-W-207ENST00000439514 CACNA1FO60840 1977 aa16.84■□□□□ 0.29
HLA-W-207ENST00000439514 LMNB1P20700 586 aa16.84■□□□□ 0.29
HLA-W-207ENST00000439514 HOXA10P31260 410 aaPredicted RBP16.84■□□□□ 0.29
HLA-W-207ENST00000439514 ISCA1Q9BUE6 129 aa16.84■□□□□ 0.29
HLA-W-207ENST00000439514 TMX4Q9H1E5 349 aaPredicted RBP16.84■□□□□ 0.29
HLA-W-207ENST00000439514 UTRNP46939 3433 aa16.83■□□□□ 0.29
HLA-W-207ENST00000439514 E9PSI1 815 aa16.83■□□□□ 0.28
HLA-W-207ENST00000439514 NEXNQ0ZGT2 675 aa16.83■□□□□ 0.28
HLA-W-207ENST00000439514 CCDC93Q567U6 631 aa16.83■□□□□ 0.28
HLA-W-207ENST00000439514 C9orf131Q5VYM1 1079 aa16.83■□□□□ 0.28
HLA-W-207ENST00000439514 RTKN2Q8IZC4 609 aa16.83■□□□□ 0.28
HLA-W-207ENST00000439514 ZNF521Q96K83 1311 aa16.83■□□□□ 0.28
HLA-W-207ENST00000439514 CRAMP1Q96RY5 1269 aa16.83■□□□□ 0.28
HLA-W-207ENST00000439514 GPBP1L1Q9HC44 474 aaPredicted RBP16.83■□□□□ 0.28
HLA-W-207ENST00000439514 C21orf2O43822 256 aa16.82■□□□□ 0.28
HLA-W-207ENST00000439514 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
HLA-W-207ENST00000439514 CCDC191Q8NCU4 936 aa16.82■□□□□ 0.28
HLA-W-207ENST00000439514 TAOK3Q9H2K8 898 aa16.82■□□□□ 0.28
HLA-W-207ENST00000439514 PHAXQ9H814 394 aaKnown RBP16.82■□□□□ 0.28
HLA-W-207ENST00000439514 RNF181Q9P0P0 153 aa16.82■□□□□ 0.28
HLA-W-207ENST00000439514 GOLGB1Q14789 3259 aaKnown RBP16.81■□□□□ 0.28
HLA-W-207ENST00000439514 SENP3-EIF4A1A0A087X0R7 540 aa16.81■□□□□ 0.28
HLA-W-207ENST00000439514 VAMP4O75379 141 aa16.81■□□□□ 0.28
HLA-W-207ENST00000439514 SLC4A2P04920 1241 aa16.81■□□□□ 0.28
HLA-W-207ENST00000439514 EXOSC9Q06265 439 aaKnown RBP16.81■□□□□ 0.28
HLA-W-207ENST00000439514 METTL22Q9BUU2 404 aaPredicted RBP16.81■□□□□ 0.28
HLA-W-207ENST00000439514 KDM2BQ8NHM5 1336 aa16.8■□□□□ 0.28
HLA-W-207ENST00000439514 TMC4Q7Z404 712 aa16.8■□□□□ 0.28
HLA-W-207ENST00000439514 ZNF428Q96B54 188 aa16.8■□□□□ 0.28
HLA-W-207ENST00000439514 TNRC6CQ9HCJ0 1690 aaKnown RBP16.79■□□□□ 0.28
HLA-W-207ENST00000439514 NFKBIEO00221 500 aa16.79■□□□□ 0.28
HLA-W-207ENST00000439514 DDX46Q7L014 1031 aaKnown RBP16.79■□□□□ 0.28
HLA-W-207ENST00000439514 ZBTB38Q8NAP3 1195 aaPredicted RBP16.79■□□□□ 0.28
HLA-W-207ENST00000439514 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
HLA-W-207ENST00000439514 CWC25Q9NXE8 425 aaPredicted RBP16.79■□□□□ 0.28
HLA-W-207ENST00000439514 SLX4Q8IY92 1834 aa16.79■□□□□ 0.28
HLA-W-207ENST00000439514 FER1L6Q2WGJ9 1857 aa16.78■□□□□ 0.28
HLA-W-207ENST00000439514 ATP5J2-PTCD1G3V325 749 aa16.78■□□□□ 0.28
HLA-W-207ENST00000439514 BBOX1O75936 387 aa16.78■□□□□ 0.28
HLA-W-207ENST00000439514 FLIIQ13045 1269 aa16.78■□□□□ 0.28
HLA-W-207ENST00000439514 MYD88Q99836 296 aa16.78■□□□□ 0.28
HLA-W-207ENST00000439514 MAP3K2Q9Y2U5 619 aa16.78■□□□□ 0.28
HLA-W-207ENST00000439514 SBF1O95248 1867 aa16.78■□□□□ 0.28
HLA-W-207ENST00000439514 PI4KAP2A4QPH2 592 aa16.77■□□□□ 0.28
HLA-W-207ENST00000439514 PCCAP05165 728 aaPredicted RBP16.77■□□□□ 0.28
HLA-W-207ENST00000439514 FKBP4Q02790 459 aaKnown RBP eCLIP16.77■□□□□ 0.28
HLA-W-207ENST00000439514 RASSF7Q02833 373 aa16.77■□□□□ 0.28
HLA-W-207ENST00000439514 FKBP5Q13451 457 aaPredicted RBP16.77■□□□□ 0.28
HLA-W-207ENST00000439514 PI4KAP1Q8N8J0 262 aa16.77■□□□□ 0.28
HLA-W-207ENST00000439514 ZNF219Q9P2Y4 722 aaPredicted RBP16.77■□□□□ 0.28
HLA-W-207ENST00000439514 CACNA1SQ13698 1873 aa16.76■□□□□ 0.27
HLA-W-207ENST00000439514 PPEF1O14829 653 aaPredicted RBP16.76■□□□□ 0.27
HLA-W-207ENST00000439514 CT47B1P0C2W7 299 aaPredicted RBP16.76■□□□□ 0.27
HLA-W-207ENST00000439514 SF3B3Q15393 1217 aaKnown RBP16.76■□□□□ 0.27
HLA-W-207ENST00000439514 DPY19L2Q6NUT2 758 aa16.76■□□□□ 0.27
HLA-W-207ENST00000439514 PSMD1Q99460 953 aa16.76■□□□□ 0.27
HLA-W-207ENST00000439514 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
HLA-W-207ENST00000439514 IRS4O14654 1257 aaPredicted RBP16.75■□□□□ 0.27
HLA-W-207ENST00000439514 HCLS1P14317 486 aaPredicted RBP16.75■□□□□ 0.27
HLA-W-207ENST00000439514 FAM89AQ96GI7 184 aa16.75■□□□□ 0.27
HLA-W-207ENST00000439514 VPS33BQ9H267 617 aa16.75■□□□□ 0.27
HLA-W-207ENST00000439514 CDHR2Q9BYE9 1310 aa16.74■□□□□ 0.27
HLA-W-207ENST00000439514 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
HLA-W-207ENST00000439514 GRAPQ13588 217 aa16.74■□□□□ 0.27
HLA-W-207ENST00000439514 SUPT20HQ8NEM7 779 aa16.74■□□□□ 0.27
HLA-W-207ENST00000439514 GRAPLQ8TC17 118 aaPredicted RBP16.74■□□□□ 0.27
HLA-W-207ENST00000439514 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
HLA-W-207ENST00000439514 ATP6V0A2Q9Y487 856 aa16.74■□□□□ 0.27
HLA-W-207ENST00000439514 LAMB2P55268 1798 aa16.74■□□□□ 0.27
HLA-W-207ENST00000439514 TCERG1O14776 1098 aaKnown RBP16.73■□□□□ 0.27
HLA-W-207ENST00000439514 PDE8AO60658 829 aa16.73■□□□□ 0.27
HLA-W-207ENST00000439514 CCDC152Q4G0S7 254 aa16.73■□□□□ 0.27
HLA-W-207ENST00000439514 LINS1Q8NG48 757 aa16.73■□□□□ 0.27
HLA-W-207ENST00000439514 ZNF526Q8TF50 670 aaPredicted RBP16.73■□□□□ 0.27
HLA-W-207ENST00000439514 ABCC4O15439 1325 aa16.72■□□□□ 0.27
HLA-W-207ENST00000439514 DICER1Q9UPY3 1922 aaKnown RBP16.72■□□□□ 0.27
HLA-W-207ENST00000439514 GLTPD2A6NH11 291 aa16.72■□□□□ 0.27
HLA-W-207ENST00000439514 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
HLA-W-207ENST00000439514 NEURL1BA8MQ27 555 aa16.71■□□□□ 0.27
HLA-W-207ENST00000439514 C3orf67Q6ZVT6 689 aa16.71■□□□□ 0.27
HLA-W-207ENST00000439514 G2E3Q7L622 706 aa16.71■□□□□ 0.27
HLA-W-207ENST00000439514 MIER1Q8N108 512 aa16.71■□□□□ 0.27
HLA-W-207ENST00000439514 JDP2Q8WYK2 163 aa16.71■□□□□ 0.27
HLA-W-207ENST00000439514 TIAM2Q8IVF5 1701 aa16.7■□□□□ 0.26
HLA-W-207ENST00000439514 DDX60Q8IY21 1712 aaKnown RBP16.7■□□□□ 0.26
HLA-W-207ENST00000439514 IGKV5-2P06315 115 aa16.7■□□□□ 0.26
HLA-W-207ENST00000439514 IARSP41252 1262 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms