RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 CRB1P82279 1406 aa11.8□□□□□ -0.52
CDC42SE1-202ENST00000439374 POLR3GO15318 223 aaPredicted RBP11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 GUCY1B3Q02153 619 aa11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 MTERF4Q7Z6M4 381 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 PDRG1Q9NUG6 133 aa11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 WDR33Q9C0J8 1336 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 BRD1O95696 1058 aa11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 GJB2P29033 226 aa11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 PTH1RQ03431 593 aa11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 NCOA3Q9Y6Q9 1424 aa11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 RNMTO43148 476 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 STX6O43752 255 aa11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 RUFY2Q8WXA3 655 aa11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 TLR7Q9NYK1 1049 aaKnown RBP11.79□□□□□ -0.52
CDC42SE1-202ENST00000439374 CHGBP05060 677 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 KCNH5Q8NCM2 988 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 GTF3C6Q969F1 213 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 DNAJC25Q9H1X3 360 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 ARHGEF10O15013 1369 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 HSP90AB4PQ58FF6 505 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 HSP90AA4PQ58FG1 418 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 CCDC112Q8NEF3 446 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 SUCLG2Q96I99 432 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 ZBTB3Q9H5J0 574 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 ECHDC1Q9NTX5 307 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 PLEKHG1Q9ULL1 1385 aa11.78□□□□□ -0.52
CDC42SE1-202ENST00000439374 GLRX3O76003 335 aaKnown RBP11.77□□□□□ -0.52
CDC42SE1-202ENST00000439374 CYP2E1P05181 493 aaPredicted RBP11.77□□□□□ -0.52
CDC42SE1-202ENST00000439374 HSPA2P54652 639 aa11.77□□□□□ -0.52
CDC42SE1-202ENST00000439374 ADCK5Q3MIX3 580 aa11.77□□□□□ -0.52
CDC42SE1-202ENST00000439374 ANO6Q4KMQ2 910 aa11.77□□□□□ -0.52
CDC42SE1-202ENST00000439374 BEND3Q5T5X7 828 aa11.77□□□□□ -0.52
CDC42SE1-202ENST00000439374 RAB11FIP3O75154 756 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 TATP17735 454 aaPredicted RBP11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 AKAP4Q5JQC9 854 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 LARP1BQ659C4 914 aaKnown RBP11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 DDX46Q7L014 1031 aaKnown RBP11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 CYP46A1Q9Y6A2 500 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 LIG1P18858 919 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 CABP4P57796 275 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 SLFNL1Q499Z3 407 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 CCDC129Q6ZRS4 1044 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 RAB11FIP4Q86YS3 637 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 TNMDQ9H2S6 317 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 DACT1Q9NYF0 836 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 USP16Q9Y5T5 823 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 SNX14Q9Y5W7 946 aa11.77□□□□□ -0.53
CDC42SE1-202ENST00000439374 GOLGA6L6A8MZA4 724 aa11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 HS1BP3Q53T59 392 aa11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 SSH3Q8TE77 659 aa11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 KCNF1Q9H3M0 494 aa11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 SNRKQ9NRH2 765 aa11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 GRM8O00222 908 aa11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 KSR2Q6VAB6 950 aa11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 IBTKQ9P2D0 1353 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 CEP170BQ9Y4F5 1589 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 A0A087WZG4 1122 aa11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 BECN2A8MW95 431 aa11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 NMIQ13287 307 aaPredicted RBP11.76□□□□□ -0.53
CDC42SE1-202ENST00000439374 OVOS2A0A0J9YW53 1432 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 OVOS2Q6IE36 1432 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 GIGYF1O75420 1035 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 PDE4CQ08493 712 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 TOM1L2Q6ZVM7 507 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 EAF2Q96CJ1 260 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 ZNF496Q96IT1 587 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 RGS12O14924 1447 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 GOLGA6L19H0YKK7 550 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 HTATSF1O43719 755 aaKnown RBP11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 CCDC192P0DO97 292 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 ZSCAN22P10073 491 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 MCM2P49736 904 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 TAF7LQ5H9L4 462 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 CHST3Q7LGC8 479 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 NUP62CLQ9H1M0 184 aa11.75□□□□□ -0.53
CDC42SE1-202ENST00000439374 BIN1O00499 593 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 SGSM2O43147 1006 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 GTF2F1P35269 517 aaKnown RBP eCLIP11.74□□□□□ -0.539e-8■■■□□ 17.1
CDC42SE1-202ENST00000439374 GNL2Q13823 731 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 HSP90AB3PQ58FF7 597 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 LIMCH1Q9UPQ0 1083 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 RBM8AQ9Y5S9 174 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 COL9A3Q14050 684 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 DLC1Q96QB1 1528 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 H3BQV1 296 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 MCM5P33992 734 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 EVA1CP58658 441 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 FKBP4Q02790 459 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 SEC62Q99442 399 aaKnown RBP11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 CLIP2Q9UDT6 1046 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 USP32Q8NFA0 1604 aa11.74□□□□□ -0.53
CDC42SE1-202ENST00000439374 ELF2Q15723 593 aa11.73□□□□□ -0.53
CDC42SE1-202ENST00000439374 HOMER1Q86YM7 354 aa11.73□□□□□ -0.53
CDC42SE1-202ENST00000439374 AMOTQ4VCS5 1084 aa11.73□□□□□ -0.53
CDC42SE1-202ENST00000439374 ANKRD13DQ6ZTN6 518 aa11.73□□□□□ -0.53
CDC42SE1-202ENST00000439374 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.73□□□□□ -0.53
CDC42SE1-202ENST00000439374 CDC42BPGQ6DT37 1551 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms