RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 NLRP10Q86W26 655 aa26.44■■□□□ 1.82
UBE2F-212ENST00000439338 CHMP4AQ9BY43 222 aa26.43■■□□□ 1.82
UBE2F-212ENST00000439338 GOLGA2Q08379 1002 aa26.42■■□□□ 1.82
UBE2F-212ENST00000439338 ZNF526Q8TF50 670 aaPredicted RBP26.42■■□□□ 1.82
UBE2F-212ENST00000439338 RNF181Q9P0P0 153 aa26.42■■□□□ 1.82
UBE2F-212ENST00000439338 FER1L6Q2WGJ9 1857 aa26.42■■□□□ 1.82
UBE2F-212ENST00000439338 CCER2I3L3R5 266 aa26.41■■□□□ 1.82
UBE2F-212ENST00000439338 NFKBIEO00221 500 aa26.41■■□□□ 1.82
UBE2F-212ENST00000439338 CRY2Q49AN0 593 aa26.41■■□□□ 1.82
UBE2F-212ENST00000439338 SPINK5Q9NQ38 1064 aaPredicted RBP26.41■■□□□ 1.82
UBE2F-212ENST00000439338 CCDC88AQ3V6T2 1871 aa26.4■■□□□ 1.82
UBE2F-212ENST00000439338 TCERG1O14776 1098 aaKnown RBP26.4■■□□□ 1.82
UBE2F-212ENST00000439338 RNF123Q5XPI4 1314 aa26.39■■□□□ 1.82
UBE2F-212ENST00000439338 ATP5J2-PTCD1G3V325 749 aa26.39■■□□□ 1.82
UBE2F-212ENST00000439338 C3orf67Q6ZVT6 689 aa26.39■■□□□ 1.82
UBE2F-212ENST00000439338 RIC3Q7Z5B4 369 aa26.39■■□□□ 1.82
UBE2F-212ENST00000439338 ZNF428Q96B54 188 aa26.39■■□□□ 1.82
UBE2F-212ENST00000439338 ISCA1Q9BUE6 129 aa26.39■■□□□ 1.82
UBE2F-212ENST00000439338 PRELPP51888 382 aa26.38■■□□□ 1.81
UBE2F-212ENST00000439338 STK31Q9BXU1 1019 aa26.38■■□□□ 1.81
UBE2F-212ENST00000439338 GPBP1L1Q9HC44 474 aaPredicted RBP26.38■■□□□ 1.81
UBE2F-212ENST00000439338 TRMT112Q9UI30 125 aaKnown RBP26.38■■□□□ 1.81
UBE2F-212ENST00000439338 LAMB2P55268 1798 aa26.38■■□□□ 1.81
UBE2F-212ENST00000439338 EXOSC9Q06265 439 aaKnown RBP26.37■■□□□ 1.81
UBE2F-212ENST00000439338 SLC10A5Q5PT55 438 aa26.37■■□□□ 1.81
UBE2F-212ENST00000439338 RPGRQ92834 1020 aaKnown RBP26.37■■□□□ 1.81
UBE2F-212ENST00000439338 SH3TC1Q8TE82 1336 aa26.37■■□□□ 1.81
UBE2F-212ENST00000439338 ZNF521Q96K83 1311 aa26.37■■□□□ 1.81
UBE2F-212ENST00000439338 LMNB1P20700 586 aa26.36■■□□□ 1.81
UBE2F-212ENST00000439338 ALDH1B1P30837 517 aa26.36■■□□□ 1.81
UBE2F-212ENST00000439338 SOGA3Q5TF21 947 aa26.36■■□□□ 1.81
UBE2F-212ENST00000439338 SYNE4Q8N205 404 aa26.36■■□□□ 1.81
UBE2F-212ENST00000439338 C7orf43Q8WVR3 580 aa26.36■■□□□ 1.81
UBE2F-212ENST00000439338 TIAM2Q8IVF5 1701 aa26.35■■□□□ 1.81
UBE2F-212ENST00000439338 NLRP3Q96P20 1036 aa26.35■■□□□ 1.81
UBE2F-212ENST00000439338 MYH16Q9H6N6 1097 aa26.35■■□□□ 1.81
UBE2F-212ENST00000439338 DDX60Q8IY21 1712 aaKnown RBP26.34■■□□□ 1.81
UBE2F-212ENST00000439338 DDX58O95786 925 aaKnown RBP26.34■■□□□ 1.81
UBE2F-212ENST00000439338 HCLS1P14317 486 aaPredicted RBP26.34■■□□□ 1.81
UBE2F-212ENST00000439338 HOXA10P31260 410 aaPredicted RBP26.34■■□□□ 1.81
UBE2F-212ENST00000439338 CCDC93Q567U6 631 aa26.34■■□□□ 1.81
UBE2F-212ENST00000439338 MYD88Q99836 296 aa26.34■■□□□ 1.81
UBE2F-212ENST00000439338 VAMP4O75379 141 aa26.33■■□□□ 1.81
UBE2F-212ENST00000439338 OLFM4Q6UX06 510 aa26.33■■□□□ 1.81
UBE2F-212ENST00000439338 RBM17Q96I25 401 aaKnown RBP26.33■■□□□ 1.81
UBE2F-212ENST00000439338 TAOK3Q9H2K8 898 aa26.33■■□□□ 1.81
UBE2F-212ENST00000439338 CACNA1FO60840 1977 aa26.33■■□□□ 1.8
UBE2F-212ENST00000439338 DICER1Q9UPY3 1922 aaKnown RBP26.32■■□□□ 1.8
UBE2F-212ENST00000439338 TRIM28Q13263 835 aaKnown RBP26.32■■□□□ 1.8
UBE2F-212ENST00000439338 G2E3Q7L622 706 aa26.32■■□□□ 1.8
UBE2F-212ENST00000439338 LTBP3Q9NS15 1303 aa26.32■■□□□ 1.8
UBE2F-212ENST00000439338 SLC4A2P04920 1241 aa26.31■■□□□ 1.8
UBE2F-212ENST00000439338 DIEXFQ68CQ4 756 aaKnown RBP26.31■■□□□ 1.8
UBE2F-212ENST00000439338 FAM89AQ96GI7 184 aa26.3■■□□□ 1.8
UBE2F-212ENST00000439338 CRAMP1Q96RY5 1269 aa26.3■■□□□ 1.8
UBE2F-212ENST00000439338 METTL22Q9BUU2 404 aaPredicted RBP26.3■■□□□ 1.8
UBE2F-212ENST00000439338 MAP3K2Q9Y2U5 619 aa26.3■■□□□ 1.8
UBE2F-212ENST00000439338 KSR2Q6VAB6 950 aa26.29■■□□□ 1.8
UBE2F-212ENST00000439338 ZC3H4Q9UPT8 1303 aaKnown RBP26.29■■□□□ 1.8
UBE2F-212ENST00000439338 PI4KAP2A4QPH2 592 aa26.28■■□□□ 1.8
UBE2F-212ENST00000439338 RTL5Q5HYW3 569 aaPredicted RBP26.28■■□□□ 1.8
UBE2F-212ENST00000439338 PI4KAP1Q8N8J0 262 aa26.28■■□□□ 1.8
UBE2F-212ENST00000439338 PPEF1O14829 653 aaPredicted RBP26.27■■□□□ 1.8
UBE2F-212ENST00000439338 FLIIQ13045 1269 aa26.27■■□□□ 1.8
UBE2F-212ENST00000439338 ABCC4O15439 1325 aa26.27■■□□□ 1.8
UBE2F-212ENST00000439338 SNED1Q8TER0 1413 aa26.27■■□□□ 1.8
UBE2F-212ENST00000439338 FKBP4Q02790 459 aaKnown RBP eCLIP26.26■■□□□ 1.79
UBE2F-212ENST00000439338 SLC51AQ86UW1 340 aa26.26■■□□□ 1.79
UBE2F-212ENST00000439338 RTKN2Q8IZC4 609 aa26.26■■□□□ 1.79
UBE2F-212ENST00000439338 CCDC191Q8NCU4 936 aa26.26■■□□□ 1.79
UBE2F-212ENST00000439338 CWC25Q9NXE8 425 aaPredicted RBP26.25■■□□□ 1.79
UBE2F-212ENST00000439338 TAF1P21675 1872 aa26.25■■□□□ 1.79
UBE2F-212ENST00000439338 IRS4O14654 1257 aaPredicted RBP26.24■■□□□ 1.79
UBE2F-212ENST00000439338 KIF3CO14782 793 aa26.24■■□□□ 1.79
UBE2F-212ENST00000439338 C1QTNF8P60827 252 aa26.24■■□□□ 1.79
UBE2F-212ENST00000439338 MIER1Q8N108 512 aa26.24■■□□□ 1.79
UBE2F-212ENST00000439338 ZBTB38Q8NAP3 1195 aaPredicted RBP26.24■■□□□ 1.79
UBE2F-212ENST00000439338 NMRK2Q9NPI5 230 aa26.24■■□□□ 1.79
UBE2F-212ENST00000439338 KDM2BQ8NHM5 1336 aa26.23■■□□□ 1.79
UBE2F-212ENST00000439338 FKBP5Q13451 457 aaPredicted RBP26.23■■□□□ 1.79
UBE2F-212ENST00000439338 CC2D2BQ6DHV5 1058 aa26.23■■□□□ 1.79
UBE2F-212ENST00000439338 DDX46Q7L014 1031 aaKnown RBP26.23■■□□□ 1.79
UBE2F-212ENST00000439338 E9PSI1 815 aa26.22■■□□□ 1.79
UBE2F-212ENST00000439338 IGKV5-2P06315 115 aa26.22■■□□□ 1.79
UBE2F-212ENST00000439338 NEXNQ0ZGT2 675 aa26.22■■□□□ 1.79
UBE2F-212ENST00000439338 ZNF277Q9NRM2 450 aaPredicted RBP26.22■■□□□ 1.79
UBE2F-212ENST00000439338 PCCAP05165 728 aaPredicted RBP26.21■■□□□ 1.79
UBE2F-212ENST00000439338 GRAPQ13588 217 aa26.21■■□□□ 1.79
UBE2F-212ENST00000439338 GRAPLQ8TC17 118 aaPredicted RBP26.21■■□□□ 1.79
UBE2F-212ENST00000439338 JARID2Q92833 1246 aaPredicted RBP26.21■■□□□ 1.79
UBE2F-212ENST00000439338 SF3B3Q15393 1217 aaKnown RBP26.2■■□□□ 1.78
UBE2F-212ENST00000439338 GLTPD2A6NH11 291 aa26.19■■□□□ 1.78
UBE2F-212ENST00000439338 SLFN5Q08AF3 891 aa26.19■■□□□ 1.78
UBE2F-212ENST00000439338 CWF19L2Q2TBE0 894 aaKnown RBP26.19■■□□□ 1.78
UBE2F-212ENST00000439338 PSMD1Q99460 953 aa26.19■■□□□ 1.78
UBE2F-212ENST00000439338 ATP6V0A2Q9Y487 856 aa26.19■■□□□ 1.78
UBE2F-212ENST00000439338 NEURL1BA8MQ27 555 aa26.18■■□□□ 1.78
UBE2F-212ENST00000439338 BBOX1O75936 387 aa26.18■■□□□ 1.78
UBE2F-212ENST00000439338 DNAAF4Q8WXU2 420 aa26.18■■□□□ 1.78
UBE2F-212ENST00000439338 CDCA7LQ96GN5 454 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms