RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 PDRG1Q9NUG6 133 aa18.56■□□□□ 0.56
DHFR-201ENST00000439211 CYP46A1Q9Y6A2 500 aa18.56■□□□□ 0.56
DHFR-201ENST00000439211 MAP2P11137 1827 aaKnown RBP18.56■□□□□ 0.56
DHFR-201ENST00000439211 RAB11FIP3O75154 756 aa18.56■□□□□ 0.56
DHFR-201ENST00000439211 SKIDA1Q1XH10 827 aa18.56■□□□□ 0.56
DHFR-201ENST00000439211 SYT10Q6XYQ8 523 aa18.56■□□□□ 0.56
DHFR-201ENST00000439211 IL17REQ8NFR9 667 aa18.56■□□□□ 0.56
DHFR-201ENST00000439211 LIMCH1Q9UPQ0 1083 aa18.56■□□□□ 0.56
DHFR-201ENST00000439211 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
DHFR-201ENST00000439211 BRD1O95696 1058 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 CPS1P31327 1500 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 FSD1Q9BTV5 496 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 ATP10DQ9P241 1426 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 PLEKHG3A1L390 1219 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 ESCO1Q5FWF5 840 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 MNS1Q8NEH6 495 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 STX6O43752 255 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 NRDCO43847 1150 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 LMAN1P49257 510 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 FOSBP53539 338 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 ICE2Q659A1 982 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 HOMER1Q86YM7 354 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 TCEANC2Q96MN5 208 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 CASQ1P31415 396 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 AK2P54819 239 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 CREBRFQ8IUR6 639 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 OSBPL3Q9H4L5 887 aa18.55■□□□□ 0.56
DHFR-201ENST00000439211 PA2G4Q9UQ80 394 aaKnown RBP18.55■□□□□ 0.56
DHFR-201ENST00000439211 SIGLEC1Q9BZZ2 1709 aa18.54■□□□□ 0.56
DHFR-201ENST00000439211 GOLGA6L19H0YKK7 550 aa18.54■□□□□ 0.56
DHFR-201ENST00000439211 DHX16O60231 1041 aaKnown RBP18.54■□□□□ 0.56
DHFR-201ENST00000439211 ZNF622Q969S3 477 aaKnown RBP eCLIP18.54■□□□□ 0.56
DHFR-201ENST00000439211 CCDC8Q9H0W5 538 aaPredicted RBP18.54■□□□□ 0.56
DHFR-201ENST00000439211 GEMIN8Q9NWZ8 242 aaKnown RBP18.54■□□□□ 0.56
DHFR-201ENST00000439211 GLRX3O76003 335 aaKnown RBP18.54■□□□□ 0.56
DHFR-201ENST00000439211 GYS2P54840 703 aa18.54■□□□□ 0.56
DHFR-201ENST00000439211 KMT5BQ4FZB7 885 aa18.54■□□□□ 0.56
DHFR-201ENST00000439211 RIC3Q7Z5B4 369 aa18.54■□□□□ 0.56
DHFR-201ENST00000439211 NECAB1Q8N987 351 aa18.54■□□□□ 0.56
DHFR-201ENST00000439211 TRIM66O15016 1216 aa18.53■□□□□ 0.56
DHFR-201ENST00000439211 TTC31Q49AM3 519 aaPredicted RBP18.53■□□□□ 0.56
DHFR-201ENST00000439211 HOXC9P31274 260 aa18.53■□□□□ 0.56
DHFR-201ENST00000439211 LARP1BQ659C4 914 aaKnown RBP18.53■□□□□ 0.56
DHFR-201ENST00000439211 INTS4Q96HW7 963 aaKnown RBP18.53■□□□□ 0.56
DHFR-201ENST00000439211 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
DHFR-201ENST00000439211 CYP2E1P05181 493 aaPredicted RBP18.53■□□□□ 0.56
DHFR-201ENST00000439211 ZSCAN26Q16670 478 aa18.53■□□□□ 0.56
DHFR-201ENST00000439211 FILIP1Q7Z7B0 1213 aa18.52■□□□□ 0.56
DHFR-201ENST00000439211 MYO1CO00159 1063 aa18.52■□□□□ 0.56
DHFR-201ENST00000439211 FBXO38Q6PIJ6 1188 aa18.52■□□□□ 0.56
DHFR-201ENST00000439211 CCAR2Q8N163 923 aaKnown RBP18.52■□□□□ 0.56
DHFR-201ENST00000439211 BOLA2Q9H3K6 86 aa18.52■□□□□ 0.56
DHFR-201ENST00000439211 LGR6Q9HBX8 967 aa18.52■□□□□ 0.56
DHFR-201ENST00000439211 GJB2P29033 226 aa18.52■□□□□ 0.55
DHFR-201ENST00000439211 CAMK4Q16566 473 aa18.52■□□□□ 0.55
DHFR-201ENST00000439211 EP400NLQ6ZTU2 488 aa18.51■□□□□ 0.55
DHFR-201ENST00000439211 SLU7O95391 586 aaKnown RBP18.51■□□□□ 0.55
DHFR-201ENST00000439211 ZSCAN22P10073 491 aaPredicted RBP18.51■□□□□ 0.55
DHFR-201ENST00000439211 MYL6BP14649 208 aa18.51■□□□□ 0.55
DHFR-201ENST00000439211 UBXN4Q92575 508 aa18.51■□□□□ 0.55
DHFR-201ENST00000439211 TMEM2Q9UHN6 1383 aa18.51■□□□□ 0.55
DHFR-201ENST00000439211 CSB-PGBD3P0DP91 1061 aa18.51■□□□□ 0.55
DHFR-201ENST00000439211 SYT1P21579 422 aa18.51■□□□□ 0.55
DHFR-201ENST00000439211 SYCP1Q15431 976 aa18.51■□□□□ 0.55
DHFR-201ENST00000439211 BICD2Q8TD16 824 aa18.51■□□□□ 0.55
DHFR-201ENST00000439211 MAP3K2Q9Y2U5 619 aa18.51■□□□□ 0.55
DHFR-201ENST00000439211 TULP2O00295 520 aa18.5■□□□□ 0.55
DHFR-201ENST00000439211 LRRC59Q96AG4 307 aaKnown RBP18.5■□□□□ 0.55
DHFR-201ENST00000439211 SBNO1A3KN83 1393 aa18.5■□□□□ 0.55
DHFR-201ENST00000439211 NEXNQ0ZGT2 675 aa18.5■□□□□ 0.55
DHFR-201ENST00000439211 PLEKHO1Q53GL0 409 aaPredicted RBP18.5■□□□□ 0.55
DHFR-201ENST00000439211 A0A1B0GUL7 405 aa18.5■□□□□ 0.55
DHFR-201ENST00000439211 H3BQV1 296 aa18.5■□□□□ 0.55
DHFR-201ENST00000439211 DNM1Q05193 864 aaKnown RBP18.5■□□□□ 0.55
DHFR-201ENST00000439211 E2F4Q16254 413 aa18.5■□□□□ 0.55
DHFR-201ENST00000439211 IFFO2Q5TF58 517 aa18.5■□□□□ 0.55
DHFR-201ENST00000439211 RNF20Q5VTR2 975 aa18.5■□□□□ 0.55
DHFR-201ENST00000439211 SNX14Q9Y5W7 946 aa18.5■□□□□ 0.55
DHFR-201ENST00000439211 KCNQ3O43525 872 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 CYP2C19P33261 490 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 SART3Q15020 963 aaKnown RBP18.49■□□□□ 0.55
DHFR-201ENST00000439211 CWF19L2Q2TBE0 894 aaKnown RBP18.49■□□□□ 0.55
DHFR-201ENST00000439211 YY1AP1Q9H869 796 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 CLIP2Q9UDT6 1046 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 DDX58O95786 925 aaKnown RBP18.49■□□□□ 0.55
DHFR-201ENST00000439211 ECHDC1Q9NTX5 307 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 JRKLQ9Y4A0 524 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 TDO2P48775 406 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 CEBPZQ03701 1054 aaKnown RBP18.49■□□□□ 0.55
DHFR-201ENST00000439211 TTLL5Q6EMB2 1281 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 ERO1AQ96HE7 468 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 TMEM131LA2VDJ0 1609 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 MAP3K5Q99683 1374 aa18.49■□□□□ 0.55
DHFR-201ENST00000439211 BECN2A8MW95 431 aa18.48■□□□□ 0.55
DHFR-201ENST00000439211 SGSM2O43147 1006 aa18.48■□□□□ 0.55
DHFR-201ENST00000439211 RASEFQ8IZ41 740 aa18.48■□□□□ 0.55
DHFR-201ENST00000439211 MYO5BQ9ULV0 1848 aa18.48■□□□□ 0.55
DHFR-201ENST00000439211 HSPA4P34932 840 aa18.48■□□□□ 0.55
DHFR-201ENST00000439211 KCNF1Q9H3M0 494 aa18.48■□□□□ 0.55
DHFR-201ENST00000439211 CHRM1P11229 460 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms