RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 WDR33Q9C0J8 1336 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 PLBD2Q8NHP8 589 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 KIF2CQ99661 725 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 RICTORQ6R327 1708 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 KDM4AO75164 1064 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 SART3Q15020 963 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 BRINP3Q76B58 766 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 KLHDC4Q8TBB5 520 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■■□ 22.8
TRAPPC9-202ENST00000438773 PPLO60437 1756 aa13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 RBM25P49756 843 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 DZIP3Q86Y13 1208 aaKnown RBP13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 ZSCAN31Q96LW9 406 aaPredicted RBP13.73□□□□□ -0.21
TRAPPC9-202ENST00000438773 USP31Q70CQ4 1352 aa13.72□□□□□ -0.21
TRAPPC9-202ENST00000438773 LARP1BQ659C4 914 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-202ENST00000438773 DNAJC10Q8IXB1 793 aa13.72□□□□□ -0.21
TRAPPC9-202ENST00000438773 RASSF8Q8NHQ8 419 aa13.72□□□□□ -0.21
TRAPPC9-202ENST00000438773 RAI14Q9P0K7 980 aa13.72□□□□□ -0.21
TRAPPC9-202ENST00000438773 PTPRUQ92729 1446 aa13.72□□□□□ -0.21
TRAPPC9-202ENST00000438773 PRIM1P49642 420 aaKnown RBP13.72□□□□□ -0.21
TRAPPC9-202ENST00000438773 IL15P40933 162 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-202ENST00000438773 CCDC83Q8IWF9 413 aa13.71□□□□□ -0.21
TRAPPC9-202ENST00000438773 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
TRAPPC9-202ENST00000438773 CPS1P31327 1500 aa13.71□□□□□ -0.21
TRAPPC9-202ENST00000438773 TECPR2O15040 1411 aa13.71□□□□□ -0.21
TRAPPC9-202ENST00000438773 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.21
TRAPPC9-202ENST00000438773 SMARCC1Q92922 1105 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-202ENST00000438773 SUCLG2Q96I99 432 aa13.71□□□□□ -0.21
TRAPPC9-202ENST00000438773 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC9-202ENST00000438773 MBD3O95983 291 aa13.71□□□□□ -0.22
TRAPPC9-202ENST00000438773 GCKRQ14397 625 aa13.71□□□□□ -0.22
TRAPPC9-202ENST00000438773 PROSER3Q2NL68 480 aa13.71□□□□□ -0.22
TRAPPC9-202ENST00000438773 CERKQ8TCT0 537 aa13.71□□□□□ -0.22
TRAPPC9-202ENST00000438773 DHX16O60231 1041 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 FAM89AQ96GI7 184 aa13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 ERVV-2B6SEH9 535 aa13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 RAD21O60216 631 aa13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 TTC41PQ6P2S7 1318 aa13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 LRRC7Q96NW7 1537 aa13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 PRAMEF22A3QJZ6 481 aa13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 SLC5A1P13866 664 aa13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 TDO2P48775 406 aa13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 IMMTQ16891 758 aaKnown RBP13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 SPATA31A3Q5VYP0 1347 aa13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 CHMLP26374 656 aa13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 SAFBQ15424 915 aaKnown RBP eCLIP13.7□□□□□ -0.22
TRAPPC9-202ENST00000438773 BEND3Q5T5X7 828 aa13.69□□□□□ -0.22
TRAPPC9-202ENST00000438773 SNX21Q969T3 373 aa13.69□□□□□ -0.22
TRAPPC9-202ENST00000438773 LIMCH1Q9UPQ0 1083 aa13.69□□□□□ -0.22
TRAPPC9-202ENST00000438773 MTMR7Q9Y216 660 aa13.69□□□□□ -0.22
TRAPPC9-202ENST00000438773 NIP7Q9Y221 180 aaKnown RBP eCLIP13.69□□□□□ -0.22
TRAPPC9-202ENST00000438773 TFCP2Q12800 502 aa13.69□□□□□ -0.22
TRAPPC9-202ENST00000438773 NCOA3Q9Y6Q9 1424 aa13.69□□□□□ -0.22
TRAPPC9-202ENST00000438773 WDR17Q8IZU2 1322 aa13.69□□□□□ -0.22
TRAPPC9-202ENST00000438773 MYO3AQ8NEV4 1616 aa13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 CDC42BPGQ6DT37 1551 aa13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 ATP2B3Q16720 1220 aa13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 CAVIN4Q5BKX8 364 aa13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 CDCA7Q9BWT1 371 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 CARD10Q9BWT7 1032 aa13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 USP21Q9UK80 565 aa13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 NBPF14Q5TI25 921 aa13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 CCDC73Q6ZRK6 1079 aa13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 SSH3Q8TE77 659 aa13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 DDX11Q96FC9 970 aa13.68□□□□□ -0.22
TRAPPC9-202ENST00000438773 BECN2A8MW95 431 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 IRS4O14654 1257 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 CEBPZQ03701 1054 aaKnown RBP13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 MAP3K12Q12852 859 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 ZMYND15Q9H091 742 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 NEURL1BA8MQ27 555 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 CCDC191Q8NCU4 936 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 USP26Q9BXU7 913 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 OVOS2A0A0J9YW53 1432 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 OVOS2Q6IE36 1432 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 TPM4P67936 248 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 FERMT3Q86UX7 667 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 AK7Q96M32 723 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 TIMM10P62072 90 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 SIRT2Q8IXJ6 389 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 TRIM34Q9BYJ4 488 aa13.67□□□□□ -0.22
TRAPPC9-202ENST00000438773 PKP1Q13835 747 aa13.66□□□□□ -0.22
TRAPPC9-202ENST00000438773 RBM8AQ9Y5S9 174 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-202ENST00000438773 GOLGA6L19H0YKK7 550 aa13.66□□□□□ -0.22
TRAPPC9-202ENST00000438773 FAM98CQ17RN3 349 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-202ENST00000438773 CCDC152Q4G0S7 254 aa13.66□□□□□ -0.22
TRAPPC9-202ENST00000438773 TMX3Q96JJ7 454 aa13.66□□□□□ -0.22
TRAPPC9-202ENST00000438773 SH2B1Q9NRF2 756 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-202ENST00000438773 TTLL7Q6ZT98 887 aa13.66□□□□□ -0.22
TRAPPC9-202ENST00000438773 ATP2B1P20020 1258 aa13.65□□□□□ -0.22
TRAPPC9-202ENST00000438773 RFC4P35249 363 aa13.65□□□□□ -0.22
TRAPPC9-202ENST00000438773 ANAPC15P60006 121 aa13.65□□□□□ -0.22
TRAPPC9-202ENST00000438773 NBPF5PQ86XG9 351 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-202ENST00000438773 TCEANC2Q96MN5 208 aa13.65□□□□□ -0.22
TRAPPC9-202ENST00000438773 KRT85P78386 507 aa13.65□□□□□ -0.22
TRAPPC9-202ENST00000438773 HELBQ8NG08 1087 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms