RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 PPP1R42Q7Z4L9 355 aa20.61■□□□□ 0.89
SNRPB-202ENST00000438552 ERFEQ4G0M1 354 aa20.6■□□□□ 0.89
SNRPB-202ENST00000438552 DNAAF4Q8WXU2 420 aa20.6■□□□□ 0.89
SNRPB-202ENST00000438552 UTP14AQ9BVJ6 771 aaKnown RBP20.6■□□□□ 0.89
SNRPB-202ENST00000438552 GTF2E1P29083 439 aaPredicted RBP20.59■□□□□ 0.89
SNRPB-202ENST00000438552 CHRNA5P30532 468 aa20.59■□□□□ 0.89
SNRPB-202ENST00000438552 WWC3Q9ULE0 1092 aa20.59■□□□□ 0.89
SNRPB-202ENST00000438552 RIC1Q4ADV7 1423 aa20.59■□□□□ 0.89
SNRPB-202ENST00000438552 A0A0G2JLW4 131 aa20.58■□□□□ 0.89
SNRPB-202ENST00000438552 IGKV5-2P06315 115 aa20.58■□□□□ 0.89
SNRPB-202ENST00000438552 DPEP1P16444 411 aa20.58■□□□□ 0.89
SNRPB-202ENST00000438552 TGFB2P61812 414 aa20.58■□□□□ 0.89
SNRPB-202ENST00000438552 NEXNQ0ZGT2 675 aa20.58■□□□□ 0.89
SNRPB-202ENST00000438552 CWF19L2Q2TBE0 894 aaKnown RBP20.58■□□□□ 0.89
SNRPB-202ENST00000438552 BRIP1Q9BX63 1249 aa20.58■□□□□ 0.89
SNRPB-202ENST00000438552 TRMT112Q9UI30 125 aaKnown RBP20.58■□□□□ 0.89
SNRPB-202ENST00000438552 PTPRCP08575 1304 aa20.57■□□□□ 0.88
SNRPB-202ENST00000438552 TRIM28Q13263 835 aaKnown RBP20.57■□□□□ 0.88
SNRPB-202ENST00000438552 SYNE4Q8N205 404 aa20.57■□□□□ 0.88
SNRPB-202ENST00000438552 RNF123Q5XPI4 1314 aa20.56■□□□□ 0.88
SNRPB-202ENST00000438552 ARFGEF1Q9Y6D6 1849 aa20.56■□□□□ 0.88
SNRPB-202ENST00000438552 BCAR3O75815 825 aa20.56■□□□□ 0.88
SNRPB-202ENST00000438552 C2CD5Q86YS7 1000 aa20.56■□□□□ 0.88
SNRPB-202ENST00000438552 CWC25Q9NXE8 425 aaPredicted RBP20.56■□□□□ 0.88
SNRPB-202ENST00000438552 GOLGB1Q14789 3259 aaKnown RBP20.56■□□□□ 0.88
SNRPB-202ENST00000438552 SH3TC1Q8TE82 1336 aa20.55■□□□□ 0.88
SNRPB-202ENST00000438552 KIF16BQ96L93 1317 aa20.55■□□□□ 0.88
SNRPB-202ENST00000438552 MYH3P11055 1940 aa20.55■□□□□ 0.88
SNRPB-202ENST00000438552 NEURL1BA8MQ27 555 aa20.55■□□□□ 0.88
SNRPB-202ENST00000438552 PDE6BP35913 854 aa20.55■□□□□ 0.88
SNRPB-202ENST00000438552 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
SNRPB-202ENST00000438552 SLC4A10Q6U841 1118 aa20.55■□□□□ 0.88
SNRPB-202ENST00000438552 CCDC191Q8NCU4 936 aa20.55■□□□□ 0.88
SNRPB-202ENST00000438552 NOB1Q9ULX3 412 aaKnown RBP20.55■□□□□ 0.88
SNRPB-202ENST00000438552 KCNA3P22001 575 aa20.54■□□□□ 0.88
SNRPB-202ENST00000438552 BRPF1P55201 1214 aaPredicted RBP20.54■□□□□ 0.88
SNRPB-202ENST00000438552 PELP1Q8IZL8 1130 aaKnown RBP20.54■□□□□ 0.88
SNRPB-202ENST00000438552 FAM89AQ96GI7 184 aa20.54■□□□□ 0.88
SNRPB-202ENST00000438552 HCLS1P14317 486 aaPredicted RBP20.53■□□□□ 0.88
SNRPB-202ENST00000438552 BEND3Q5T5X7 828 aa20.53■□□□□ 0.88
SNRPB-202ENST00000438552 C3orf67Q6ZVT6 689 aa20.53■□□□□ 0.88
SNRPB-202ENST00000438552 LINS1Q8NG48 757 aa20.53■□□□□ 0.88
SNRPB-202ENST00000438552 H0YIN7 160 aa20.52■□□□□ 0.88
SNRPB-202ENST00000438552 JARID2Q92833 1246 aaPredicted RBP20.52■□□□□ 0.88
SNRPB-202ENST00000438552 SLX4Q8IY92 1834 aa20.51■□□□□ 0.87
SNRPB-202ENST00000438552 PCCAP05165 728 aaPredicted RBP20.51■□□□□ 0.87
SNRPB-202ENST00000438552 ZBTB38Q8NAP3 1195 aaPredicted RBP20.51■□□□□ 0.87
SNRPB-202ENST00000438552 FRAT1Q92837 279 aaPredicted RBP20.51■□□□□ 0.87
SNRPB-202ENST00000438552 TAF1P21675 1872 aa20.51■□□□□ 0.87
SNRPB-202ENST00000438552 KLRG2A4D1S0 409 aaPredicted RBP20.5■□□□□ 0.87
SNRPB-202ENST00000438552 SRGNP10124 158 aa20.5■□□□□ 0.87
SNRPB-202ENST00000438552 YBX3P16989 372 aaKnown RBP eCLIP20.5■□□□□ 0.872e-9■■■□□ 15.1
SNRPB-202ENST00000438552 GCKRQ14397 625 aa20.5■□□□□ 0.87
SNRPB-202ENST00000438552 SLC10A5Q5PT55 438 aa20.5■□□□□ 0.87
SNRPB-202ENST00000438552 IRS4O14654 1257 aaPredicted RBP20.49■□□□□ 0.87
SNRPB-202ENST00000438552 CRY2Q49AN0 593 aa20.49■□□□□ 0.87
SNRPB-202ENST00000438552 ZNF622Q969S3 477 aaKnown RBP eCLIP20.49■□□□□ 0.87
SNRPB-202ENST00000438552 SRCIN1Q9C0H9 1055 aa20.49■□□□□ 0.87
SNRPB-202ENST00000438552 PIM2Q9P1W9 311 aa20.49■□□□□ 0.87
SNRPB-202ENST00000438552 PDZRN3Q9UPQ7 1066 aa20.49■□□□□ 0.87
SNRPB-202ENST00000438552 GPR162Q16538 588 aa20.48■□□□□ 0.87
SNRPB-202ENST00000438552 UBE3BQ7Z3V4 1068 aa20.48■□□□□ 0.87
SNRPB-202ENST00000438552 API5Q9BZZ5 524 aaKnown RBP20.48■□□□□ 0.87
SNRPB-202ENST00000438552 TNNQ9UQP3 1299 aa20.48■□□□□ 0.87
SNRPB-202ENST00000438552 BCS1LQ9Y276 419 aa20.48■□□□□ 0.87
SNRPB-202ENST00000438552 CDHR2Q9BYE9 1310 aa20.48■□□□□ 0.87
SNRPB-202ENST00000438552 COL4A1P02462 1669 aa20.48■□□□□ 0.87
SNRPB-202ENST00000438552 NPR1P16066 1061 aa20.47■□□□□ 0.87
SNRPB-202ENST00000438552 STYK1Q6J9G0 422 aa20.47■□□□□ 0.87
SNRPB-202ENST00000438552 MASTLQ96GX5 879 aa20.47■□□□□ 0.87
SNRPB-202ENST00000438552 NLRP3Q96P20 1036 aa20.47■□□□□ 0.87
SNRPB-202ENST00000438552 SPEF2Q9C093 1822 aa20.47■□□□□ 0.87
SNRPB-202ENST00000438552 ALDH1L1O75891 902 aa20.46■□□□□ 0.87
SNRPB-202ENST00000438552 TRIM27P14373 513 aa20.46■□□□□ 0.87
SNRPB-202ENST00000438552 DALRD3Q5D0E6 543 aaKnown RBP20.46■□□□□ 0.87
SNRPB-202ENST00000438552 ARHGAP45Q92619 1136 aa20.46■□□□□ 0.87
SNRPB-202ENST00000438552 RPGRQ92834 1020 aaKnown RBP20.46■□□□□ 0.87
SNRPB-202ENST00000438552 RCAN3Q9UKA8 241 aa20.46■□□□□ 0.87
SNRPB-202ENST00000438552 ABCC4O15439 1325 aa20.46■□□□□ 0.87
SNRPB-202ENST00000438552 H7C1W4 665 aa20.45■□□□□ 0.86
SNRPB-202ENST00000438552 CASP7P55210 303 aa20.45■□□□□ 0.86
SNRPB-202ENST00000438552 ATF7IPQ6VMQ6 1270 aa20.45■□□□□ 0.86
SNRPB-202ENST00000438552 TTLL6Q8N841 843 aa20.45■□□□□ 0.86
SNRPB-202ENST00000438552 IPO8O15397 1037 aaKnown RBP20.44■□□□□ 0.86
SNRPB-202ENST00000438552 ZKSCAN2Q63HK3 967 aa20.44■□□□□ 0.86
SNRPB-202ENST00000438552 PRPF40BQ6NWY9 871 aaKnown RBP20.44■□□□□ 0.86
SNRPB-202ENST00000438552 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
SNRPB-202ENST00000438552 GRM8O00222 908 aa20.43■□□□□ 0.86
SNRPB-202ENST00000438552 PDE8AO60658 829 aa20.43■□□□□ 0.86
SNRPB-202ENST00000438552 CNKSR1Q969H4 720 aa20.43■□□□□ 0.86
SNRPB-202ENST00000438552 CLUAP1Q96AJ1 413 aa20.43■□□□□ 0.86
SNRPB-202ENST00000438552 UTRNP46939 3433 aa20.43■□□□□ 0.86
SNRPB-202ENST00000438552 HOXA10P31260 410 aaPredicted RBP20.42■□□□□ 0.86
SNRPB-202ENST00000438552 CCT4P50991 539 aaKnown RBP20.42■□□□□ 0.86
SNRPB-202ENST00000438552 RBM17Q96I25 401 aaKnown RBP20.42■□□□□ 0.86
SNRPB-202ENST00000438552 C9orf78Q9NZ63 289 aaPredicted RBP20.42■□□□□ 0.86
SNRPB-202ENST00000438552 ZNF219Q9P2Y4 722 aaPredicted RBP20.42■□□□□ 0.86
SNRPB-202ENST00000438552 LRRC37AA6NMS7 1700 aa20.41■□□□□ 0.86
SNRPB-202ENST00000438552 FER1L6Q2WGJ9 1857 aa20.41■□□□□ 0.86
SNRPB-202ENST00000438552 HSP90B1P14625 803 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms