RNA–Protein interactions for RNA: ENST00000438345.1

SDR42E1P3-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1 pseudogene 3, humanhuman

BASIC

Gene SDR42E1P3, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1P3-201ENST00000438345 SWI5Q1ZZU3 235 aa11.9□□□□□ -0.5
SDR42E1P3-201ENST00000438345 LINC00114Q6XXX2 140 aa11.9□□□□□ -0.5
SDR42E1P3-201ENST00000438345 BTLAQ7Z6A9 289 aa11.9□□□□□ -0.5
SDR42E1P3-201ENST00000438345 RAB44Q7Z6P3 723 aaPredicted RBP11.9□□□□□ -0.5
SDR42E1P3-201ENST00000438345 SLAIN2Q9P270 581 aa11.9□□□□□ -0.5
SDR42E1P3-201ENST00000438345 CHSY3Q70JA7 882 aa11.89□□□□□ -0.51
SDR42E1P3-201ENST00000438345 VTI1AQ96AJ9 217 aa11.89□□□□□ -0.51
SDR42E1P3-201ENST00000438345 DGKGP49619 791 aa11.88□□□□□ -0.51
SDR42E1P3-201ENST00000438345 DGKZQ13574 1117 aa11.88□□□□□ -0.51
SDR42E1P3-201ENST00000438345 CAPN12Q6ZSI9 719 aa11.88□□□□□ -0.51
SDR42E1P3-201ENST00000438345 DMGDHQ9UI17 866 aaKnown RBP11.88□□□□□ -0.51
SDR42E1P3-201ENST00000438345 LRFN2Q9ULH4 789 aa11.88□□□□□ -0.51
SDR42E1P3-201ENST00000438345 IGHA1P01876 353 aa11.87□□□□□ -0.51
SDR42E1P3-201ENST00000438345 SYT9Q86SS6 491 aa11.87□□□□□ -0.51
SDR42E1P3-201ENST00000438345 SPEM2Q0P670 501 aa11.86□□□□□ -0.51
SDR42E1P3-201ENST00000438345 PLA2G4EQ3MJ16 856 aa11.86□□□□□ -0.51
SDR42E1P3-201ENST00000438345 KCNH4Q9UQ05 1017 aa11.86□□□□□ -0.51
SDR42E1P3-201ENST00000438345 TGFBR3LH3BV60 316 aa11.85□□□□□ -0.51
SDR42E1P3-201ENST00000438345 COL8A1P27658 744 aa11.85□□□□□ -0.51
SDR42E1P3-201ENST00000438345 GRNP28799 593 aaKnown RBP11.85□□□□□ -0.51
SDR42E1P3-201ENST00000438345 KCNQ4P56696 695 aa11.85□□□□□ -0.51
SDR42E1P3-201ENST00000438345 MKNK1Q9BUB5 465 aa11.85□□□□□ -0.51
SDR42E1P3-201ENST00000438345 GNB5O14775 395 aa11.84□□□□□ -0.51
SDR42E1P3-201ENST00000438345 ITGB2P05107 769 aa11.84□□□□□ -0.51
SDR42E1P3-201ENST00000438345 MDFIQ99750 246 aa11.84□□□□□ -0.51
SDR42E1P3-201ENST00000438345 SAP130Q9H0E3 1048 aa11.84□□□□□ -0.51
SDR42E1P3-201ENST00000438345 SUV39H2Q9H5I1 410 aa11.84□□□□□ -0.51
SDR42E1P3-201ENST00000438345 ELOA3CA0A087WX78 387 aaPredicted RBP11.83□□□□□ -0.52
SDR42E1P3-201ENST00000438345 ELOA3DA6NLF2 546 aaPredicted RBP11.83□□□□□ -0.52
SDR42E1P3-201ENST00000438345 SIN3BO75182 1162 aa11.83□□□□□ -0.52
SDR42E1P3-201ENST00000438345 HIF1AQ16665 826 aa11.83□□□□□ -0.52
SDR42E1P3-201ENST00000438345 ELOA3BQ3SY89 546 aa11.83□□□□□ -0.52
SDR42E1P3-201ENST00000438345 COX20Q5RI15 118 aa11.83□□□□□ -0.52
SDR42E1P3-201ENST00000438345 ELOA3Q8NG57 546 aa11.83□□□□□ -0.52
SDR42E1P3-201ENST00000438345 MYO19Q96H55 970 aa11.83□□□□□ -0.52
SDR42E1P3-201ENST00000438345 CXXC1Q9P0U4 656 aaPredicted RBP11.83□□□□□ -0.52
SDR42E1P3-201ENST00000438345 PIK3R2O00459 728 aa11.82□□□□□ -0.52
SDR42E1P3-201ENST00000438345 IDH3AP50213 366 aa11.82□□□□□ -0.52
SDR42E1P3-201ENST00000438345 C11orf91Q3C1V1 193 aa11.82□□□□□ -0.52
SDR42E1P3-201ENST00000438345 IER5Q5VY09 327 aa11.82□□□□□ -0.52
SDR42E1P3-201ENST00000438345 ALYREFQ86V81 257 aaKnown RBP11.82□□□□□ -0.52
SDR42E1P3-201ENST00000438345 KRBA1A5PL33 1030 aa11.81□□□□□ -0.52
SDR42E1P3-201ENST00000438345 SUPT5HO00267 1087 aaKnown RBP11.81□□□□□ -0.52
SDR42E1P3-201ENST00000438345 NAA30Q147X3 362 aaPredicted RBP11.81□□□□□ -0.52
SDR42E1P3-201ENST00000438345 CLP1Q92989 425 aaKnown RBP11.81□□□□□ -0.52
SDR42E1P3-201ENST00000438345 ADARB2-AS1A8MUL3 147 aa11.8□□□□□ -0.52
SDR42E1P3-201ENST00000438345 BHMTQ93088 406 aa11.8□□□□□ -0.52
SDR42E1P3-201ENST00000438345 USP20Q9Y2K6 914 aa11.8□□□□□ -0.52
SDR42E1P3-201ENST00000438345 CARNS1A5YM72 827 aa11.79□□□□□ -0.52
SDR42E1P3-201ENST00000438345 MICAL2O94851 1124 aa11.79□□□□□ -0.52
SDR42E1P3-201ENST00000438345 ALAS2P22557 587 aa11.79□□□□□ -0.52
SDR42E1P3-201ENST00000438345 INPP5BP32019 993 aa11.79□□□□□ -0.52
SDR42E1P3-201ENST00000438345 NEUROD1Q13562 356 aa11.79□□□□□ -0.52
SDR42E1P3-201ENST00000438345 FAM26DQ5JW98 314 aa11.79□□□□□ -0.52
SDR42E1P3-201ENST00000438345 TNFRSF25Q93038 417 aa11.79□□□□□ -0.52
SDR42E1P3-201ENST00000438345 IFT43Q96FT9 208 aa11.79□□□□□ -0.52
SDR42E1P3-201ENST00000438345 MSTNO14793 375 aa11.78□□□□□ -0.52
SDR42E1P3-201ENST00000438345 SCNN1AP37088 669 aa11.78□□□□□ -0.52
SDR42E1P3-201ENST00000438345 SPOCK3Q9BQ16 436 aa11.78□□□□□ -0.52
SDR42E1P3-201ENST00000438345 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.78□□□□□ -0.52
SDR42E1P3-201ENST00000438345 TIMELESSQ9UNS1 1208 aa11.78□□□□□ -0.52
SDR42E1P3-201ENST00000438345 GSX2Q9BZM3 304 aa11.77□□□□□ -0.53
SDR42E1P3-201ENST00000438345 OPLAHO14841 1288 aa11.76□□□□□ -0.53
SDR42E1P3-201ENST00000438345 NOP53Q9NZM5 478 aaKnown RBP11.76□□□□□ -0.53
SDR42E1P3-201ENST00000438345 TMEM88BA6NKF7 163 aa11.75□□□□□ -0.53
SDR42E1P3-201ENST00000438345 ATP2B4P23634 1241 aa11.75□□□□□ -0.53
SDR42E1P3-201ENST00000438345 C16orf46Q6P387 395 aa11.75□□□□□ -0.53
SDR42E1P3-201ENST00000438345 TREML1Q86YW5 311 aa11.75□□□□□ -0.53
SDR42E1P3-201ENST00000438345 ETFBKMTQ8IXQ9 262 aa11.75□□□□□ -0.53
SDR42E1P3-201ENST00000438345 TRIM11Q96F44 468 aa11.75□□□□□ -0.53
SDR42E1P3-201ENST00000438345 PROCP04070 461 aa11.74□□□□□ -0.53
SDR42E1P3-201ENST00000438345 ADH7P40394 386 aa11.74□□□□□ -0.53
SDR42E1P3-201ENST00000438345 ARSDP51689 593 aa11.74□□□□□ -0.53
SDR42E1P3-201ENST00000438345 TBC1D8BQ0IIM8 1120 aa11.74□□□□□ -0.53
SDR42E1P3-201ENST00000438345 SUZ12Q15022 739 aaKnown RBP11.74□□□□□ -0.53
SDR42E1P3-201ENST00000438345 ARID3AQ99856 593 aa11.74□□□□□ -0.53
SDR42E1P3-201ENST00000438345 IGFLR1Q9H665 355 aa11.74□□□□□ -0.53
SDR42E1P3-201ENST00000438345 SEPT3Q9UH03 358 aa11.74□□□□□ -0.53
SDR42E1P3-201ENST00000438345 STARD13Q9Y3M8 1113 aa11.74□□□□□ -0.53
SDR42E1P3-201ENST00000438345 TNFRSF10BO14763 440 aa11.73□□□□□ -0.53
SDR42E1P3-201ENST00000438345 PPP1R15AO75807 674 aaPredicted RBP11.73□□□□□ -0.53
SDR42E1P3-201ENST00000438345 NFKB1P19838 968 aa11.73□□□□□ -0.53
SDR42E1P3-201ENST00000438345 CCINQ13939 588 aa11.73□□□□□ -0.53
SDR42E1P3-201ENST00000438345 KRT25Q7Z3Z0 450 aa11.73□□□□□ -0.53
SDR42E1P3-201ENST00000438345 C8orf86Q6ZUL3 223 aa11.72□□□□□ -0.53
SDR42E1P3-201ENST00000438345 COL26A1Q96A83 441 aa11.72□□□□□ -0.53
SDR42E1P3-201ENST00000438345 TARSP26639 723 aaKnown RBP11.71□□□□□ -0.53
SDR42E1P3-201ENST00000438345 RGL4Q8IZJ4 473 aa11.71□□□□□ -0.53
SDR42E1P3-201ENST00000438345 PLVAPQ9BX97 442 aa11.71□□□□□ -0.53
SDR42E1P3-201ENST00000438345 ZFATQ9P243 1243 aa11.71□□□□□ -0.53
SDR42E1P3-201ENST00000438345 RTCBQ9Y3I0 505 aaKnown RBP11.71□□□□□ -0.53
SDR42E1P3-201ENST00000438345 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.71□□□□□ -0.53
SDR42E1P3-201ENST00000438345 M0R082 166 aa11.7□□□□□ -0.54
SDR42E1P3-201ENST00000438345 EPB42P16452 691 aa11.7□□□□□ -0.54
SDR42E1P3-201ENST00000438345 CMTR1Q8N1G2 835 aaKnown RBP11.7□□□□□ -0.54
SDR42E1P3-201ENST00000438345 ZNF417Q8TAU3 575 aa11.7□□□□□ -0.54
SDR42E1P3-201ENST00000438345 PNMA5Q96PV4 448 aa11.7□□□□□ -0.54
SDR42E1P3-201ENST00000438345 ZNF587Q96SQ5 575 aaPredicted RBP11.7□□□□□ -0.54
SDR42E1P3-201ENST00000438345 UBE2OQ9C0C9 1292 aaKnown RBP11.7□□□□□ -0.54
SDR42E1P3-201ENST00000438345 EFCC1Q9HA90 598 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms