RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 MBIPQ9NS73 344 aa11.17□□□□□ -0.62
HERPUD2-206ENST00000438224 LAS1LQ9Y4W2 734 aaKnown RBP11.17□□□□□ -0.62
HERPUD2-206ENST00000438224 ERBB4Q15303 1308 aa11.16□□□□□ -0.62
HERPUD2-206ENST00000438224 EIF2S2P20042 333 aaKnown RBP11.16□□□□□ -0.62
HERPUD2-206ENST00000438224 CLEC4GQ6UXB4 293 aa11.16□□□□□ -0.62
HERPUD2-206ENST00000438224 DICER1Q9UPY3 1922 aaKnown RBP11.15□□□□□ -0.62
HERPUD2-206ENST00000438224 MAP3K15Q6ZN16 1313 aa11.15□□□□□ -0.62
HERPUD2-206ENST00000438224 HAX1O00165 279 aa11.15□□□□□ -0.62
HERPUD2-206ENST00000438224 NPM2Q86SE8 214 aaKnown RBP11.15□□□□□ -0.62
HERPUD2-206ENST00000438224 SETDB2Q96T68 719 aa11.15□□□□□ -0.62
HERPUD2-206ENST00000438224 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
HERPUD2-206ENST00000438224 PIM2Q9P1W9 311 aa11.15□□□□□ -0.62
HERPUD2-206ENST00000438224 NIP7Q9Y221 180 aaKnown RBP eCLIP11.15□□□□□ -0.62
HERPUD2-206ENST00000438224 ATP10DQ9P241 1426 aa11.15□□□□□ -0.62
HERPUD2-206ENST00000438224 TAF1P21675 1872 aa11.15□□□□□ -0.63
HERPUD2-206ENST00000438224 UBN2Q6ZU65 1347 aa11.14□□□□□ -0.63
HERPUD2-206ENST00000438224 C2CD5Q86YS7 1000 aa11.14□□□□□ -0.63
HERPUD2-206ENST00000438224 CNBD1Q8NA66 436 aa11.14□□□□□ -0.63
HERPUD2-206ENST00000438224 TIAM2Q8IVF5 1701 aa11.14□□□□□ -0.63
HERPUD2-206ENST00000438224 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
HERPUD2-206ENST00000438224 DDX60Q8IY21 1712 aaKnown RBP11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 FAM177BA6PVY3 158 aa11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 ERVV-1B6SEH8 477 aa11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 PRELPP51888 382 aa11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 DALRD3Q5D0E6 543 aaKnown RBP11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 DUSP27Q5VZP5 1158 aa11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 BRIP1Q9BX63 1249 aa11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 SLC24A3Q9HC58 644 aa11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 IFT57Q9NWB7 429 aa11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 CHPF2Q9P2E5 772 aa11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 ZNF652Q9Y2D9 606 aa11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 CACNA1FO60840 1977 aa11.13□□□□□ -0.63
HERPUD2-206ENST00000438224 GPTP24298 496 aa11.12□□□□□ -0.63
HERPUD2-206ENST00000438224 GNAI1P63096 354 aa11.12□□□□□ -0.63
HERPUD2-206ENST00000438224 GIGYF2Q6Y7W6 1299 aaKnown RBP11.12□□□□□ -0.63
HERPUD2-206ENST00000438224 ARHGAP27Q6ZUM4 889 aa11.12□□□□□ -0.63
HERPUD2-206ENST00000438224 NBPF5PQ86XG9 351 aaPredicted RBP11.12□□□□□ -0.63
HERPUD2-206ENST00000438224 C8orf58Q8NAV2 365 aa11.12□□□□□ -0.63
HERPUD2-206ENST00000438224 XAGE3Q8WTP9 111 aa11.12□□□□□ -0.63
HERPUD2-206ENST00000438224 DDX21Q9NR30 783 aaKnown RBP eCLIP11.12□□□□□ -0.63
HERPUD2-206ENST00000438224 H0YIN7 160 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 ELL2O00472 640 aaPredicted RBP11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 HOXB7P09629 217 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 RASSF7Q02833 373 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 CCDC27Q2M243 656 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 HDGFL1Q5TGJ6 251 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 KIF6Q6ZMV9 814 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 COPS6Q7L5N1 327 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 NUTM1Q86Y26 1132 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 WWC1Q8IX03 1113 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 ZNF34Q8IZ26 560 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 TSPYL6Q8N831 410 aa11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 TSR2Q969E8 191 aaKnown RBP11.11□□□□□ -0.63
HERPUD2-206ENST00000438224 NTSR2O95665 410 aa11.1□□□□□ -0.63
HERPUD2-206ENST00000438224 SRGNP10124 158 aa11.1□□□□□ -0.63
HERPUD2-206ENST00000438224 PDE6BP35913 854 aa11.1□□□□□ -0.63
HERPUD2-206ENST00000438224 AIMP1Q12904 312 aaKnown RBP11.1□□□□□ -0.63
HERPUD2-206ENST00000438224 SUSD4Q5VX71 490 aa11.1□□□□□ -0.63
HERPUD2-206ENST00000438224 FAM9BQ8IZU0 186 aa11.1□□□□□ -0.63
HERPUD2-206ENST00000438224 TTLL6Q8N841 843 aa11.1□□□□□ -0.63
HERPUD2-206ENST00000438224 IBTKQ9P2D0 1353 aaPredicted RBP11.1□□□□□ -0.63
HERPUD2-206ENST00000438224 RIC1Q4ADV7 1423 aa11.09□□□□□ -0.63
HERPUD2-206ENST00000438224 KLRG2A4D1S0 409 aaPredicted RBP11.09□□□□□ -0.63
HERPUD2-206ENST00000438224 NFKBIEO00221 500 aa11.09□□□□□ -0.63
HERPUD2-206ENST00000438224 ST5P78524 1137 aa11.09□□□□□ -0.63
HERPUD2-206ENST00000438224 ERFEQ4G0M1 354 aa11.09□□□□□ -0.63
HERPUD2-206ENST00000438224 C3orf67Q6ZVT6 689 aa11.09□□□□□ -0.63
HERPUD2-206ENST00000438224 SLC51AQ86UW1 340 aa11.09□□□□□ -0.63
HERPUD2-206ENST00000438224 ZNF622Q969S3 477 aaKnown RBP eCLIP11.09□□□□□ -0.63
HERPUD2-206ENST00000438224 SALL2Q9Y467 1007 aaPredicted RBP11.09□□□□□ -0.63
HERPUD2-206ENST00000438224 COL4A1P02462 1669 aa11.08□□□□□ -0.64
HERPUD2-206ENST00000438224 NPHP1O15259 732 aa11.08□□□□□ -0.64
HERPUD2-206ENST00000438224 CALD1Q05682 793 aaKnown RBP11.08□□□□□ -0.64
HERPUD2-206ENST00000438224 C9orf131Q5VYM1 1079 aa11.08□□□□□ -0.64
HERPUD2-206ENST00000438224 TPTE2Q6XPS3 522 aa11.08□□□□□ -0.64
HERPUD2-206ENST00000438224 SYNE4Q8N205 404 aa11.08□□□□□ -0.64
HERPUD2-206ENST00000438224 ZNF428Q96B54 188 aa11.08□□□□□ -0.64
HERPUD2-206ENST00000438224 PHAXQ9H814 394 aaKnown RBP11.08□□□□□ -0.64
HERPUD2-206ENST00000438224 C21orf2O43822 256 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 CRY2Q49AN0 593 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 STYK1Q6J9G0 422 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 PRPF40BQ6NWY9 871 aaKnown RBP11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 OLFM4Q6UX06 510 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 RASEFQ8IZ41 740 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 ZNF526Q8TF50 670 aaPredicted RBP11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 C7orf43Q8WVR3 580 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 MASTLQ96GX5 879 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 PDZRN3Q9UPQ7 1066 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 SNED1Q8TER0 1413 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 IL16Q14005 1332 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 FANCIQ9NVI1 1328 aa11.07□□□□□ -0.64
HERPUD2-206ENST00000438224 TCIRG1Q13488 830 aa11.06□□□□□ -0.64
HERPUD2-206ENST00000438224 NLRP10Q86W26 655 aa11.06□□□□□ -0.64
HERPUD2-206ENST00000438224 MYH3P11055 1940 aa11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 TESPA1A2RU30 521 aaPredicted RBP11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 TCERG1O14776 1098 aaKnown RBP11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 PYGBP11216 843 aa11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 NPR1P16066 1061 aa11.05□□□□□ -0.64
HERPUD2-206ENST00000438224 PARP10Q53GL7 1025 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms